Coordinate-aware organelle record

Scutellaria platensis chloroplast genome

Available MW420949.1 152,484 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	75	74
psbA	gene	photosystem-ii	−	380	1439	1059
trnK-UUU	gene	translation-rna	−	1675	4255	2580
matK	gene	other	−	1966	3502	1536
rps16	gene	ribosomal-protein	−	5174	6344	1170
trnQ-UUC	gene	translation-rna	−	7460	7532	72
psbK	gene	photosystem-ii	+	7856	8042	186
psbI	gene	photosystem-ii	+	8438	8549	111
trnS-GCU	gene	translation-rna	−	8668	8756	88
trnG-CGA	gene	translation-rna	+	9451	10214	763
trnR-UCU	gene	translation-rna	+	10388	10460	72
atpA	gene	atp-synthase	−	10556	12080	1524
atpF	gene	atp-synthase	−	12162	13392	1230
atpH	gene	atp-synthase	−	13752	13998	246
atpI	gene	atp-synthase	−	14952	15696	744
rps2	gene	ribosomal-protein	−	16043	16754	711
rpoC2	gene	rna-polymerase	−	16950	21177	4227
rpoC1	gene	rna-polymerase	−	21331	24167	2836
rpoB	gene	rna-polymerase	−	24193	27406	3213
trnC-GCA	gene	translation-rna	+	28579	28650	71
petN	gene	cytochrome	+	29360	29450	90
psbM	gene	photosystem-ii	−	30470	30575	105
trnD-GUC	gene	translation-rna	−	31102	31176	74
trnY-GUA	gene	translation-rna	−	31289	31373	84
trnE-UUC	gene	translation-rna	−	31432	31505	73
trnT-GGU	gene	translation-rna	+	32092	32164	72
psbD	gene	photosystem-ii	+	33478	34540	1062
psbC	gene	photosystem-ii	+	34487	35909	1422
trnS-UCA	gene	translation-rna	−	36153	36246	93
psbZ	gene	photosystem-ii	+	36566	36755	189
trnG-GCC	gene	translation-rna	+	37031	37102	71
trnfM-CAU	gene	translation-rna	−	37255	37329	74
rps14	gene	ribosomal-protein	−	37478	37781	303
psaB	gene	photosystem-i	−	37908	40113	2205
psaA	gene	photosystem-i	−	40138	42391	2253
ycf3	gene	other	−	43081	45011	1930
trnS-GGA	gene	translation-rna	+	45897	45984	87
rps4	gene	ribosomal-protein	−	46263	46869	606
trnT-UGU	gene	translation-rna	−	47200	47273	73
trnL-UAA	gene	translation-rna	+	47958	48520	562
trnF-GAA	gene	translation-rna	+	48831	48904	73
ndhJ	gene	nad-dehydrogenase	−	49562	50039	477
ndhK	gene	nad-dehydrogenase	−	50146	50824	678
ndhC	gene	nad-dehydrogenase	−	50876	51239	363
trnV-UAC	gene	translation-rna	−	52237	52890	653
trnM-CAU	gene	translation-rna	+	53070	53143	73
atpE	gene	atp-synthase	−	53358	53760	402
atpB	gene	atp-synthase	−	53756	55244	1488
rbcL	gene	other	+	56008	57451	1443
accD	gene	other	+	58168	59635	1467
psaI	gene	photosystem-i	+	60351	60462	111
ycf4	gene	other	+	60895	61450	555
cemA	gene	other	+	62131	62791	660
petA	gene	cytochrome	+	62997	63960	963
pabJ	gene	other	−	64975	65098	123
psbL	gene	photosystem-ii	−	65231	65348	117
psbF	gene	photosystem-ii	−	65371	65491	120
psbE	gene	photosystem-ii	−	65505	65757	252
petL	gene	cytochrome	+	66666	66762	96
petG	gene	cytochrome	+	66937	67051	114
trnW-CCA	gene	translation-rna	−	67169	67243	74
trnP-UGG	gene	translation-rna	−	67412	67486	74
psbJ	gene	photosystem-ii	+	67759	67894	135
rpl33	gene	ribosomal-protein	+	68357	68558	201
rps18	gene	ribosomal-protein	+	68732	69038	306
rpl20	gene	ribosomal-protein	−	69271	69658	387
rps12	gene	ribosomal-protein	−	70442	98580	28138
rps12	gene	ribosomal-protein	+	70442	139250	68808
clpP	gene	other	−	70711	72651	1940
psbB	gene	photosystem-ii	+	73129	74656	1527
psbT	gene	photosystem-ii	+	74847	74949	102
psbN	gene	photosystem-ii	−	75023	75155	132
psbH	gene	photosystem-ii	+	75258	75480	222
petB	gene	cytochrome	+	75604	76973	1369
petD	gene	cytochrome	+	77157	78349	1192
rpoA	gene	rna-polymerase	−	78518	79532	1014
rps11	gene	ribosomal-protein	−	79603	80020	417
rpl36	gene	ribosomal-protein	−	80121	80235	114
infA	gene	other	−	80330	80564	234
rps8	gene	ribosomal-protein	−	80682	81093	411
rpl14	gene	ribosomal-protein	−	81258	81627	369
rpl16	gene	ribosomal-protein	−	81752	82985	1233
rps3	gene	ribosomal-protein	−	83139	83802	663
rpl22	gene	ribosomal-protein	−	83803	84259	456
rps19	gene	ribosomal-protein	−	84318	84597	279
rpl2	gene	ribosomal-protein	−	84651	86134	1483
rpl23	gene	ribosomal-protein	−	86152	86434	282
trnI-CAU	gene	translation-rna	−	86593	86667	74
ycf2	gene	other	+	86755	93565	6810
ycf15	gene	other	+	93706	93904	198
trnL-CAA	gene	translation-rna	−	94159	94240	81
ndhB	gene	nad-dehydrogenase	−	94782	96994	2212
rps7	gene	ribosomal-protein	−	97268	97736	468
trnV-GAC	gene	translation-rna	+	100146	100218	72
rrn16	gene	ribosomal-rna	+	100445	101936	1491
trnI-GAU	gene	translation-rna	+	102234	103254	1020
trnA-UGC	gene	translation-rna	+	103319	104205	886
rrn23	gene	ribosomal-rna	+	104374	107187	2813
rrn4.5	gene	ribosomal-rna	+	107285	107388	103
rrn5	gene	ribosomal-rna	+	107635	107756	121
trnR-ACG	gene	translation-rna	+	107990	108064	74
trnN-GUU	gene	translation-rna	+	108611	108683	72
ndhF	gene	nad-dehydrogenase	−	109759	112000	2241
rpl32	gene	ribosomal-protein	+	112523	112700	177
trnL-UAG	gene	translation-rna	+	113127	113207	80
ccsA	gene	other	+	113301	114276	975
ndhD	gene	nad-dehydrogenase	−	114512	116042	1530
psaC	gene	photosystem-i	−	116134	116380	246
ndhE	gene	nad-dehydrogenase	−	116641	116947	306
ndhG	gene	nad-dehydrogenase	−	117177	117708	531
ndhI	gene	nad-dehydrogenase	−	118072	118573	501
ndhA	gene	nad-dehydrogenase	−	118654	120755	2101
ndhH	gene	nad-dehydrogenase	−	120756	121938	1182
rps15	gene	ribosomal-protein	−	122040	122313	273
ycf1	gene	other	−	122585	128027	5442
trnN-GUU	gene	translation-rna	+	128356	128428	72
trnR-ACG	gene	translation-rna	−	128975	129049	74
rrn5	gene	ribosomal-rna	−	129283	129404	121
rrn4.5	gene	ribosomal-rna	−	129651	129754	103
rrn23	gene	ribosomal-rna	−	129852	132665	2813
trnA-UGC	gene	translation-rna	−	132834	133720	886
trnI-GAU	gene	translation-rna	−	133785	134805	1020
rrn16	gene	ribosomal-rna	−	135103	136594	1491
trnV-GAC	gene	translation-rna	−	136821	136893	72
rps7	gene	ribosomal-protein	+	139303	139771	468
ndhB	gene	nad-dehydrogenase	+	140045	142257	2212
trnL-CAA	gene	translation-rna	+	142799	142880	81
ycf15	gene	other	−	143135	143333	198
ycf2	gene	other	−	143474	150284	6810
trnI-CAU	gene	translation-rna	+	150372	150446	74
rpl23	gene	ribosomal-protein	+	150605	150887	282
rpl2	gene	ribosomal-protein	+	150905	152388	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW420949.1DNA · accDMW420949DNA · atpBMW420949DNA · matKMW420949DNA · ndhFMW420949DNA · psbAMW420949DNA · rbcLMW420949DNA · rps12MW420949DNA · ycf1MW420949