Coordinate-aware organelle record

Scutellaria pontica chloroplast genome

Available PQ059211.1 152,291 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	380	1439	1059
trnK-UUU	gene	translation-rna	−	1679	4262	2583
matK	gene	other	−	1969	3505	1536
rps16	gene	ribosomal-protein	−	5154	6317	1163
trnQ-UUG	gene	translation-rna	−	7428	7500	72
psbK	gene	photosystem-ii	+	7825	8011	186
psbI	gene	photosystem-ii	+	8405	8516	111
trnS-GCU	gene	translation-rna	−	8634	8722	88
trnG-UCC	gene	translation-rna	+	9402	10160	758
trnR-UCU	gene	translation-rna	+	10334	10406	72
atpA	gene	atp-synthase	−	10502	12026	1524
atpF	gene	atp-synthase	−	12098	13328	1230
atpH	gene	atp-synthase	−	13691	13937	246
atpI	gene	atp-synthase	−	14917	15661	744
rps2	gene	ribosomal-protein	−	16007	16718	711
rpoC2	gene	rna-polymerase	−	16932	21135	4203
rpoC1	gene	rna-polymerase	−	21288	24130	2842
rpoB	gene	rna-polymerase	−	24156	27375	3219
trnC-GCA	gene	translation-rna	+	28535	28606	71
petN	gene	cytochrome	+	29334	29424	90
psbM	gene	photosystem-ii	−	30400	30514	114
trnD-GUC	gene	translation-rna	−	31047	31121	74
trnY-GUA	gene	translation-rna	−	31234	31318	84
trnE-UUC	gene	translation-rna	−	31377	31450	73
trnT-GGU	gene	translation-rna	+	32018	32090	72
psbD	gene	photosystem-ii	+	33392	34454	1062
psbC	gene	photosystem-ii	+	34401	35823	1422
trnS-UGA	gene	translation-rna	−	36058	36150	92
psbZ	gene	photosystem-ii	+	36457	36646	189
trnG-GCC	gene	translation-rna	+	36918	36989	71
trnfM-CAU	gene	translation-rna	−	37133	37207	74
rps14	gene	ribosomal-protein	−	37361	37664	303
psaB	gene	photosystem-i	−	37791	39996	2205
psaA	gene	photosystem-i	−	40021	42274	2253
ycf3	gene	other	−	42969	44900	1931
trnS-GGA	gene	translation-rna	+	45782	45869	87
rps4	gene	ribosomal-protein	−	46150	46756	606
trnT-UGU	gene	translation-rna	−	47087	47160	73
trnL-UAA	gene	translation-rna	+	47863	48428	565
trnF-GAA	gene	translation-rna	+	48738	48811	73
ndhJ	gene	nad-dehydrogenase	−	49452	49929	477
ndhK	gene	nad-dehydrogenase	−	50037	50715	678
ndhC	gene	nad-dehydrogenase	−	50767	51130	363
trnV-UAC	gene	translation-rna	−	52116	52769	653
trnM-CAU	gene	translation-rna	+	52957	53030	73
atpE	gene	atp-synthase	−	53238	53640	402
atpB	gene	atp-synthase	−	53636	55133	1497
rbcL	gene	other	+	55883	57347	1464
accD	gene	other	+	58038	59517	1479
psaI	gene	photosystem-i	+	60227	60338	111
ycf4	gene	other	+	60773	61328	555
cemA	gene	other	+	62070	62670	600
petA	gene	cytochrome	+	62876	63839	963
psbJ	gene	photosystem-ii	−	64862	64985	123
psbL	gene	photosystem-ii	−	65118	65340	222
psbF	gene	photosystem-ii	−	65258	65378	120
psbE	gene	photosystem-ii	−	65392	65644	252
petL	gene	cytochrome	+	66512	66608	96
petG	gene	cytochrome	+	66783	66897	114
trnW-CCA	gene	translation-rna	−	67015	67089	74
trnP-UGG	gene	translation-rna	−	67258	67332	74
psaJ	gene	photosystem-i	+	67540	67738	198
rpl33	gene	ribosomal-protein	+	68195	68396	201
rps18	gene	ribosomal-protein	+	68570	68876	306
rpl20	gene	ribosomal-protein	−	69114	69501	387
rps12	gene	ribosomal-protein	−	70277	98364	28087
rps12	gene	ribosomal-protein	+	70277	139081	68804
clpP	gene	other	−	70543	72475	1932
psbB	gene	photosystem-ii	+	72941	74468	1527
psbT	gene	photosystem-ii	+	74659	74761	102
psbN	gene	photosystem-ii	−	74834	74966	132
psbH	gene	photosystem-ii	+	75069	75291	222
petB	gene	cytochrome	+	75416	76785	1369
petD	gene	cytochrome	+	76973	78164	1191
rpoA	gene	rna-polymerase	−	78538	79333	795
rps11	gene	ribosomal-protein	−	79404	79821	417
rpl36	gene	ribosomal-protein	−	79922	80036	114
infA	gene	other	−	80130	80364	234
rps8	gene	ribosomal-protein	−	80486	80897	411
rpl14	gene	ribosomal-protein	−	81053	81422	369
rpl16	gene	ribosomal-protein	−	81548	82785	1237
rps3	gene	ribosomal-protein	−	82951	83614	663
rpl22	gene	ribosomal-protein	−	83615	84071	456
rps19	gene	ribosomal-protein	−	84130	84409	279
rpl2	gene	ribosomal-protein	−	84462	85944	1482
rpl23	gene	ribosomal-protein	−	85962	86244	282
trnI-CAU	gene	translation-rna	−	86403	86477	74
ycf2	gene	other	+	86565	93345	6780
ycf15	gene	other	+	93435	93684	249
trnL-CAA	gene	translation-rna	−	93943	94024	81
ndhB	gene	nad-dehydrogenase	−	94566	96778	2212
rps7	gene	ribosomal-protein	−	97052	97520	468
trnV-GAC	gene	translation-rna	+	99935	100007	72
rrn16	gene	ribosomal-rna	+	100233	101724	1491
trnI-GAU	gene	translation-rna	+	102022	103043	1021
trnA-UGC	gene	translation-rna	+	103107	103995	888
rrn23	gene	ribosomal-rna	+	104164	106976	2812
rrn4.5	gene	ribosomal-rna	+	107074	107177	103
rrn5	gene	ribosomal-rna	+	107424	107545	121
trnR-ACG	gene	translation-rna	+	107779	107853	74
trnN-GUU	gene	translation-rna	−	108404	108476	72
ndhF	gene	nad-dehydrogenase	−	109552	111793	2241
rpl32	gene	ribosomal-protein	+	112306	112483	177
trnL-UAG	gene	translation-rna	+	112929	113009	80
ccsA	gene	other	+	113111	114086	975
ndhD	gene	nad-dehydrogenase	−	114319	115849	1530
psaC	gene	photosystem-i	−	115947	116193	246
ndhE	gene	nad-dehydrogenase	−	116448	116754	306
ndhG	gene	nad-dehydrogenase	−	116975	117506	531
ndhI	gene	nad-dehydrogenase	−	117871	118372	501
ndhA	gene	nad-dehydrogenase	−	118459	120568	2109
ndhH	gene	nad-dehydrogenase	−	120569	121781	1212
rps15	gene	ribosomal-protein	−	121847	122120	273
ycf1	gene	other	−	122317	127960	5643
trnN-GUU	gene	translation-rna	+	128178	128250	72
trnR-ACG	gene	translation-rna	−	128801	128875	74
rrn5	gene	ribosomal-rna	−	129109	129230	121
rrn4.5	gene	ribosomal-rna	−	129477	129580	103
rrn23	gene	ribosomal-rna	−	129678	132490	2812
trnA-UGC	gene	translation-rna	−	132659	133547	888
trnI-GAU	gene	translation-rna	−	133611	134632	1021
ycf68	gene	other	−	134183	134477	294
rrn16	gene	ribosomal-rna	−	134930	136421	1491
trnV-GAC	gene	translation-rna	−	136647	136719	72
rps7	gene	ribosomal-protein	+	139134	139602	468
ndhB	gene	nad-dehydrogenase	+	139876	142088	2212
trnL-CAA	gene	translation-rna	+	142630	142711	81
ycf15	gene	other	−	142970	143219	249
ycf2	gene	other	−	143309	150089	6780
trnI-CAU	gene	translation-rna	+	150177	150251	74
rpl23	gene	ribosomal-protein	+	150410	150692	282
rpl2	gene	ribosomal-protein	+	150710	152192	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059211.1DNA · accDPQ059211DNA · atpBPQ059211DNA · matKPQ059211DNA · ndhFPQ059211DNA · psbAPQ059211DNA · rbcLPQ059211DNA · rps12PQ059211DNA · ycf1PQ059211