Coordinate-aware organelle record

Scutellaria porphyrantha chloroplast genome

Available PQ059236.1 151,945 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	75	74
psbA	gene	photosystem-ii	−	361	1420	1059
trnK-UUU	gene	translation-rna	−	1661	4255	2594
matK	gene	other	−	1950	3495	1545
rps16	gene	ribosomal-protein	−	5161	6329	1168
trnQ-UUG	gene	translation-rna	−	7465	7537	72
psbK	gene	photosystem-ii	+	7861	8047	186
psbI	gene	photosystem-ii	+	8444	8555	111
trnS-GCU	gene	translation-rna	−	8653	8741	88
trnG-UCC	gene	translation-rna	+	9435	10190	755
trnR-UCU	gene	translation-rna	+	10355	10427	72
atpA	gene	atp-synthase	−	10523	12047	1524
atpF	gene	atp-synthase	−	12130	13359	1229
atpH	gene	atp-synthase	−	13724	13970	246
atpI	gene	atp-synthase	−	14963	15707	744
rps2	gene	ribosomal-protein	−	16054	16765	711
rpoC2	gene	rna-polymerase	−	16982	21173	4191
rpoC1	gene	rna-polymerase	−	21327	24146	2819
rpoB	gene	rna-polymerase	−	24172	27385	3213
trnC-GCA	gene	translation-rna	+	28561	28632	71
petN	gene	cytochrome	+	29367	29457	90
psbM	gene	photosystem-ii	−	30463	30568	105
trnD-GUC	gene	translation-rna	−	31099	31173	74
trnY-GUA	gene	translation-rna	−	31286	31370	84
trnE-UUC	gene	translation-rna	−	31429	31502	73
trnT-GGU	gene	translation-rna	+	32073	32145	72
psbD	gene	photosystem-ii	+	33461	34523	1062
psbC	gene	photosystem-ii	+	34470	35892	1422
trnS-UGA	gene	translation-rna	−	36126	36218	92
psbZ	gene	photosystem-ii	+	36537	36726	189
trnG-GCC	gene	translation-rna	+	36998	37069	71
trnfM-CAU	gene	translation-rna	−	37219	37293	74
rps14	gene	ribosomal-protein	−	37442	37745	303
psaB	gene	photosystem-i	−	37877	40082	2205
psaA	gene	photosystem-i	−	40107	42360	2253
ycf3	gene	other	−	43060	44981	1921
trnS-GGA	gene	translation-rna	+	45854	45941	87
rps4	gene	ribosomal-protein	−	46224	46830	606
trnT-UGU	gene	translation-rna	−	47171	47244	73
trnL-UAA	gene	translation-rna	+	47911	48478	567
trnF-GAA	gene	translation-rna	+	48783	48856	73
ndhJ	gene	nad-dehydrogenase	−	49505	49982	477
ndhK	gene	nad-dehydrogenase	−	50086	50764	678
ndhC	gene	nad-dehydrogenase	−	50816	51179	363
trnV-UAC	gene	translation-rna	−	52167	52826	659
trnM-CAU	gene	translation-rna	+	53006	53079	73
atpE	gene	atp-synthase	−	53287	53689	402
atpB	gene	atp-synthase	−	53685	55182	1497
rbcL	gene	other	+	55929	57393	1464
accD	gene	other	+	58118	59609	1491
psaI	gene	photosystem-i	+	59846	59957	111
ycf4	gene	other	+	60390	60945	555
cemA	gene	other	+	61558	62158	600
petA	gene	cytochrome	+	62364	63327	963
psbJ	gene	photosystem-ii	−	64347	64470	123
psbL	gene	photosystem-ii	−	64603	64720	117
psbF	gene	photosystem-ii	−	64743	64863	120
psbE	gene	photosystem-ii	−	64877	65129	252
petL	gene	cytochrome	+	66051	66147	96
petG	gene	cytochrome	+	66322	66436	114
trnW-CCA	gene	translation-rna	−	66544	66618	74
trnP-UGG	gene	translation-rna	−	66787	66861	74
psaJ	gene	photosystem-i	+	67133	67268	135
rpl33	gene	ribosomal-protein	+	67741	67942	201
rps18	gene	ribosomal-protein	+	68116	68422	306
rpl20	gene	ribosomal-protein	−	68662	69049	387
rps12	gene	ribosomal-protein	−	69832	97936	28104
rps12	gene	ribosomal-protein	+	69832	138704	68872
clpP	gene	other	−	70099	72037	1938
psbB	gene	photosystem-ii	+	72490	74017	1527
psbT	gene	photosystem-ii	+	74194	74302	108
psbN	gene	photosystem-ii	−	74362	74494	132
psbH	gene	photosystem-ii	+	74597	74819	222
petB	gene	cytochrome	+	74943	76312	1369
petD	gene	cytochrome	+	76500	77712	1212
rpoA	gene	rna-polymerase	−	77874	78888	1014
rps11	gene	ribosomal-protein	−	78959	79376	417
rpl36	gene	ribosomal-protein	−	79477	79591	114
infA	gene	other	−	79686	79920	234
rps8	gene	ribosomal-protein	−	80042	80453	411
rpl14	gene	ribosomal-protein	−	80609	80978	369
rpl16	gene	ribosomal-protein	−	81104	82335	1231
rps3	gene	ribosomal-protein	−	82489	83152	663
rpl22	gene	ribosomal-protein	−	83153	83609	456
rps19	gene	ribosomal-protein	−	83668	83947	279
rpl2	gene	ribosomal-protein	−	84002	85485	1483
rpl23	gene	ribosomal-protein	−	85503	85785	282
trnI-CAU	gene	translation-rna	−	85944	86018	74
ycf2	gene	other	+	86106	92916	6810
ycf15	gene	other	+	93006	93255	249
trnL-CAA	gene	translation-rna	−	93515	93596	81
ndhB	gene	nad-dehydrogenase	−	94138	96350	2212
rps7	gene	ribosomal-protein	−	96624	97092	468
trnV-GAC	gene	translation-rna	+	99508	99580	72
rrn16	gene	ribosomal-rna	+	99802	101293	1491
trnI-GAU	gene	translation-rna	+	101591	102610	1019
trnA-UGC	gene	translation-rna	+	102674	103560	886
rrn23	gene	ribosomal-rna	+	103729	106541	2812
rrn4.5	gene	ribosomal-rna	+	106639	106742	103
rrn5	gene	ribosomal-rna	+	106989	107110	121
trnR-ACG	gene	translation-rna	+	107344	107418	74
trnN-GUU	gene	translation-rna	−	107973	108045	72
ndhF	gene	nad-dehydrogenase	−	109121	111362	2241
rpl32	gene	ribosomal-protein	+	111875	112052	177
trnL-UAG	gene	translation-rna	+	112486	112566	80
ccsA	gene	other	+	112648	113623	975
ndhD	gene	nad-dehydrogenase	−	113860	115363	1503
psaC	gene	photosystem-i	−	115496	115742	246
ndhE	gene	nad-dehydrogenase	−	115997	116303	306
ndhG	gene	nad-dehydrogenase	−	116526	117057	531
ndhI	gene	nad-dehydrogenase	−	117405	117906	501
ndhA	gene	nad-dehydrogenase	−	117986	120090	2104
ndhH	gene	nad-dehydrogenase	−	120091	121303	1212
rps15	gene	ribosomal-protein	−	121369	121642	273
ycf1	gene	other	−	121910	127586	5676
trnN-GUU	gene	translation-rna	+	127804	127876	72
trnR-ACG	gene	translation-rna	−	128431	128505	74
rrn5	gene	ribosomal-rna	−	128739	128860	121
rrn4.5	gene	ribosomal-rna	−	129107	129210	103
rrn23	gene	ribosomal-rna	−	129308	132120	2812
trnA-UGC	gene	translation-rna	−	132289	133175	886
trnI-GAU	gene	translation-rna	−	133239	134258	1019
ycf68	gene	other	−	133809	134103	294
rrn16	gene	ribosomal-rna	−	134556	136047	1491
trnV-GAC	gene	translation-rna	−	136269	136341	72
rps7	gene	ribosomal-protein	+	138757	139225	468
ndhB	gene	nad-dehydrogenase	+	139499	141711	2212
trnL-CAA	gene	translation-rna	+	142253	142334	81
ycf15	gene	other	−	142594	142843	249
ycf2	gene	other	−	142933	149743	6810
trnI-CAU	gene	translation-rna	+	149831	149905	74
rpl23	gene	ribosomal-protein	+	150064	150346	282
rpl2	gene	ribosomal-protein	+	150364	151847	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059236.1DNA · accDPQ059236DNA · atpBPQ059236DNA · matKPQ059236DNA · ndhFPQ059236DNA · psbAPQ059236DNA · rbcLPQ059236DNA · rps12PQ059236DNA · ycf1PQ059236