Scutellaria przewalskii chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PQ059325.1 · 4–77 bp · −
psbA · PQ059325.1 · 375–1,433 bp · −
trnK-UUU · PQ059325.1 · 1,675–4,257 bp · −
matK · PQ059325.1 · 1,965–3,491 bp · −
rps16 · PQ059325.1 · 5,157–6,314 bp · −
trnQ-UUG · PQ059325.1 · 7,444–7,515 bp · −
trnS-GCU · PQ059325.1 · 8,642–8,729 bp · −
atpA · PQ059325.1 · 10,517–12,040 bp · −
atpF · PQ059325.1 · 12,122–13,350 bp · −
atpH · PQ059325.1 · 13,713–13,958 bp · −
atpI · PQ059325.1 · 14,945–15,688 bp · −
rps2 · PQ059325.1 · 16,029–16,739 bp · −
rpoC2 · PQ059325.1 · 16,954–21,159 bp · −
rpoC1 · PQ059325.1 · 21,314–24,148 bp · −
rpoB · PQ059325.1 · 24,175–27,387 bp · −
psbM · PQ059325.1 · 30,500–30,604 bp · −
trnD-GUC · PQ059325.1 · 31,130–31,203 bp · −
trnY-GUA · PQ059325.1 · 31,313–31,396 bp · −
trnE-UUC · PQ059325.1 · 31,456–31,528 bp · −
trnS-UGA · PQ059325.1 · 36,147–36,238 bp · −
trnfM-CAU · PQ059325.1 · 37,235–37,308 bp · −
rps14 · PQ059325.1 · 37,463–37,765 bp · −
psaB · PQ059325.1 · 37,894–40,098 bp · −
psaA · PQ059325.1 · 40,124–42,376 bp · −
ycf3 · PQ059325.1 · 43,072–44,991 bp · −
rps4 · PQ059325.1 · 46,244–46,849 bp · −
trnT-UGU · PQ059325.1 · 47,192–47,264 bp · −
ndhJ · PQ059325.1 · 49,537–50,013 bp · −
ndhK · PQ059325.1 · 50,122–50,799 bp · −
ndhC · PQ059325.1 · 50,853–51,215 bp · −
trnV-UAC · PQ059325.1 · 52,206–52,858 bp · −
atpE · PQ059325.1 · 53,313–53,714 bp · −
atpB · PQ059325.1 · 53,711–55,207 bp · −
psbJ · PQ059325.1 · 64,943–65,065 bp · −
psbL · PQ059325.1 · 65,199–65,315 bp · −
psbF · PQ059325.1 · 65,339–65,458 bp · −
psbE · PQ059325.1 · 65,473–65,724 bp · −
trnW-CCA · PQ059325.1 · 67,100–67,173 bp · −
trnP-UGG · PQ059325.1 · 67,343–67,416 bp · −
rpl20 · PQ059325.1 · 69,210–69,596 bp · −
rps12 · PQ059325.1 · 70,381–70,506 bp · −
rps12 · PQ059325.1 · 97,650–98,440 bp · −
clpP · PQ059325.1 · 70,648–72,576 bp · −
psbN · PQ059325.1 · 74,913–75,044 bp · −
rpoA · PQ059325.1 · 78,596–79,396 bp · −
rps11 · PQ059325.1 · 79,468–79,884 bp · −
rpl36 · PQ059325.1 · 79,986–80,099 bp · −
infA · PQ059325.1 · 80,194–80,427 bp · −
rps8 · PQ059325.1 · 80,550–80,960 bp · −
rpl14 · PQ059325.1 · 81,113–81,481 bp · −
rpl16 · PQ059325.1 · 81,608–82,841 bp · −
rps3 · PQ059325.1 · 82,997–83,659 bp · −
rpl22 · PQ059325.1 · 83,661–84,116 bp · −
rps19 · PQ059325.1 · 84,176–84,454 bp · −
rpl2 · PQ059325.1 · 84,509–85,990 bp · −
rpl23 · PQ059325.1 · 86,009–86,290 bp · −
trnI-CAU · PQ059325.1 · 86,450–86,523 bp · −
trnL-CAA · PQ059325.1 · 94,020–94,100 bp · −
ndhB · PQ059325.1 · 94,643–96,800 bp · −
rps7 · PQ059325.1 · 97,129–97,596 bp · −
trnN-GUU · PQ059325.1 · 108,476–108,547 bp · −
ndhF · PQ059325.1 · 109,604–111,865 bp · −
ndhD · PQ059325.1 · 114,211–115,713 bp · −
psaC · PQ059325.1 · 115,841–116,086 bp · −
ndhE · PQ059325.1 · 116,342–116,647 bp · −
ndhG · PQ059325.1 · 116,864–117,394 bp · −
ndhI · PQ059325.1 · 117,761–118,261 bp · −
ndhA · PQ059325.1 · 118,342–120,463 bp · −
ndhH · PQ059325.1 · 120,465–121,676 bp · −
rps15 · PQ059325.1 · 121,743–122,015 bp · −
ycf1 · PQ059325.1 · 122,209–127,845 bp · −
trnR-ACG · PQ059325.1 · 128,684–128,757 bp · −
rrn5 · PQ059325.1 · 128,992–129,112 bp · −
rrn4.5 · PQ059325.1 · 129,360–129,462 bp · −
rrn23 · PQ059325.1 · 129,561–132,372 bp · −
trnA-UGC · PQ059325.1 · 132,542–133,427 bp · −
trnI-GAU · PQ059325.1 · 133,492–134,512 bp · −
ycf68 · PQ059325.1 · 134,064–134,357 bp · −
rrn16 · PQ059325.1 · 134,811–136,301 bp · −
trnV-GAC · PQ059325.1 · 136,528–136,599 bp · −
ycf15 · PQ059325.1 · 142,851–143,099 bp · −
ycf2 · PQ059325.1 · 143,190–149,999 bp · −
psbK · PQ059325.1 · 7,840–8,025 bp · +
psbI · PQ059325.1 · 8,413–8,523 bp · +
trnG-UCC · PQ059325.1 · 9,427–10,174 bp · +
trnR-UCU · PQ059325.1 · 10,349–10,420 bp · +
trnC-GCA · PQ059325.1 · 28,548–28,618 bp · +
petN · PQ059325.1 · 29,334–29,423 bp · +
trnT-GGU · PQ059325.1 · 32,105–32,176 bp · +
psbD · PQ059325.1 · 33,481–34,542 bp · +
psbC · PQ059325.1 · 34,490–35,911 bp · +
psbZ · PQ059325.1 · 36,555–36,743 bp · +
trnG-GCC · PQ059325.1 · 37,020–37,090 bp · +
trnS-GGA · PQ059325.1 · 45,882–45,968 bp · +
trnL-UAA · PQ059325.1 · 47,949–48,509 bp · +
trnF-GAA · PQ059325.1 · 48,819–48,891 bp · +
trnM-CAU · PQ059325.1 · 53,047–53,119 bp · +
rbcL · PQ059325.1 · 55,959–57,422 bp · +
accD · PQ059325.1 · 58,136–59,614 bp · +
psaI · PQ059325.1 · 60,321–60,431 bp · +
ycf4 · PQ059325.1 · 60,865–61,419 bp · +
cemA · PQ059325.1 · 62,168–62,767 bp · +
petA · PQ059325.1 · 62,974–63,936 bp · +
petL · PQ059325.1 · 66,598–66,693 bp · +
petG · PQ059325.1 · 66,868–66,981 bp · +
psaJ · PQ059325.1 · 67,684–67,818 bp · +
rpl33 · PQ059325.1 · 68,295–68,495 bp · +
rps18 · PQ059325.1 · 68,670–68,975 bp · +
rps12 · PQ059325.1 · 138,171–138,961 bp · +
psbB · PQ059325.1 · 73,028–74,554 bp · +
psbT · PQ059325.1 · 74,745–74,852 bp · +
psbH · PQ059325.1 · 75,148–75,369 bp · +
petB · PQ059325.1 · 75,494–76,857 bp · +
petD · PQ059325.1 · 77,040–78,241 bp · +
ycf2 · PQ059325.1 · 86,612–93,421 bp · +
ycf15 · PQ059325.1 · 93,512–93,760 bp · +
trnV-GAC · PQ059325.1 · 100,012–100,083 bp · +
rrn16 · PQ059325.1 · 100,310–101,800 bp · +
trnI-GAU · PQ059325.1 · 102,099–103,119 bp · +
trnA-UGC · PQ059325.1 · 103,184–104,069 bp · +
rrn23 · PQ059325.1 · 104,239–107,050 bp · +
rrn4.5 · PQ059325.1 · 107,149–107,251 bp · +
rrn5 · PQ059325.1 · 107,499–107,619 bp · +
trnR-ACG · PQ059325.1 · 107,854–107,927 bp · +
rpl32 · PQ059325.1 · 112,193–112,369 bp · +
trnL-UAG · PQ059325.1 · 112,817–112,896 bp · +
ccsA · PQ059325.1 · 112,998–113,972 bp · +
trnN-GUU · PQ059325.1 · 128,064–128,135 bp · +
rps7 · PQ059325.1 · 139,015–139,482 bp · +
ndhB · PQ059325.1 · 139,811–141,968 bp · +
trnL-CAA · PQ059325.1 · 142,511–142,591 bp · +
trnI-CAU · PQ059325.1 · 150,088–150,161 bp · +
rpl23 · PQ059325.1 · 150,321–150,602 bp · +
rpl2 · PQ059325.1 · 150,621–152,102 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Scutellaria przewalskii
ANNOTATED PLASTOME
PQ059325.1
152,202 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38050 76101 114152 152202 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU ycf68 rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 4 77 74 Locate
psbA gene − 375 1433 1059 Locate
trnK-UUU gene − 1675 4257 2583 Locate
matK gene − 1965 3491 1527 Locate
rps16 gene − 5157 6314 1158 Locate
trnQ-UUG gene − 7444 7515 72 Locate
psbK gene + 7840 8025 186 Locate
psbI gene + 8413 8523 111 Locate
trnS-GCU gene − 8642 8729 88 Locate
trnG-UCC gene + 9427 10174 748 Locate
trnR-UCU gene + 10349 10420 72 Locate
atpA gene − 10517 12040 1524 Locate
atpF gene − 12122 13350 1229 Locate
atpH gene − 13713 13958 246 Locate
atpI gene − 14945 15688 744 Locate
rps2 gene − 16029 16739 711 Locate
rpoC2 gene − 16954 21159 4206 Locate
rpoC1 gene − 21314 24148 2835 Locate
rpoB gene − 24175 27387 3213 Locate
trnC-GCA gene + 28548 28618 71 Locate
petN gene + 29334 29423 90 Locate
psbM gene − 30500 30604 105 Locate
trnD-GUC gene − 31130 31203 74 Locate
trnY-GUA gene − 31313 31396 84 Locate
trnE-UUC gene − 31456 31528 73 Locate
trnT-GGU gene + 32105 32176 72 Locate
psbD gene + 33481 34542 1062 Locate
psbC gene + 34490 35911 1422 Locate
trnS-UGA gene − 36147 36238 92 Locate
psbZ gene + 36555 36743 189 Locate
trnG-GCC gene + 37020 37090 71 Locate
trnfM-CAU gene − 37235 37308 74 Locate
rps14 gene − 37463 37765 303 Locate
psaB gene − 37894 40098 2205 Locate
psaA gene − 40124 42376 2253 Locate
ycf3 gene − 43072 44991 1920 Locate
trnS-GGA gene + 45882 45968 87 Locate
rps4 gene − 46244 46849 606 Locate
trnT-UGU gene − 47192 47264 73 Locate
trnL-UAA gene + 47949 48509 561 Locate
trnF-GAA gene + 48819 48891 73 Locate
ndhJ gene − 49537 50013 477 Locate
ndhK gene − 50122 50799 678 Locate
ndhC gene − 50853 51215 363 Locate
trnV-UAC gene − 52206 52858 653 Locate
trnM-CAU gene + 53047 53119 73 Locate
atpE gene − 53313 53714 402 Locate
atpB gene − 53711 55207 1497 Locate
rbcL gene + 55959 57422 1464 Locate
accD gene + 58136 59614 1479 Locate
psaI gene + 60321 60431 111 Locate
ycf4 gene + 60865 61419 555 Locate
cemA gene + 62168 62767 600 Locate
petA gene + 62974 63936 963 Locate
psbJ gene − 64943 65065 123 Locate
psbL gene − 65199 65315 117 Locate
psbF gene − 65339 65458 120 Locate
psbE gene − 65473 65724 252 Locate
petL gene + 66598 66693 96 Locate
petG gene + 66868 66981 114 Locate
trnW-CCA gene − 67100 67173 74 Locate
trnP-UGG gene − 67343 67416 74 Locate
psaJ gene + 67684 67818 135 Locate
rpl33 gene + 68295 68495 201 Locate
rps18 gene + 68670 68975 306 Locate
rpl20 gene − 69210 69596 387 Locate
rps12 gene − 70381 70506 126 Locate
clpP gene − 70648 72576 1929 Locate
psbB gene + 73028 74554 1527 Locate
psbT gene + 74745 74852 108 Locate
psbN gene − 74913 75044 132 Locate
psbH gene + 75148 75369 222 Locate
petB gene + 75494 76857 1364 Locate
petD gene + 77040 78241 1202 Locate
rpoA gene − 78596 79396 801 Locate
rps11 gene − 79468 79884 417 Locate
rpl36 gene − 79986 80099 114 Locate
infA gene − 80194 80427 234 Locate
rps8 gene − 80550 80960 411 Locate
rpl14 gene − 81113 81481 369 Locate
rpl16 gene − 81608 82841 1234 Locate
rps3 gene − 82997 83659 663 Locate
rpl22 gene − 83661 84116 456 Locate
rps19 gene − 84176 84454 279 Locate
rpl2 gene − 84509 85990 1482 Locate
rpl23 gene − 86009 86290 282 Locate
trnI-CAU gene − 86450 86523 74 Locate
ycf2 gene + 86612 93421 6810 Locate
ycf15 gene + 93512 93760 249 Locate
trnL-CAA gene − 94020 94100 81 Locate
ndhB gene − 94643 96800 2158 Locate
rps7 gene − 97129 97596 468 Locate
rps12 gene − 97650 98440 791 Locate
trnV-GAC gene + 100012 100083 72 Locate
rrn16 gene + 100310 101800 1491 Locate
trnI-GAU gene + 102099 103119 1021 Locate
trnA-UGC gene + 103184 104069 886 Locate
rrn23 gene + 104239 107050 2812 Locate
rrn4.5 gene + 107149 107251 103 Locate
rrn5 gene + 107499 107619 121 Locate
trnR-ACG gene + 107854 107927 74 Locate
trnN-GUU gene − 108476 108547 72 Locate
ndhF gene − 109604 111865 2262 Locate
rpl32 gene + 112193 112369 177 Locate
trnL-UAG gene + 112817 112896 80 Locate
ccsA gene + 112998 113972 975 Locate
ndhD gene − 114211 115713 1503 Locate
psaC gene − 115841 116086 246 Locate
ndhE gene − 116342 116647 306 Locate
ndhG gene − 116864 117394 531 Locate
ndhI gene − 117761 118261 501 Locate
ndhA gene − 118342 120463 2122 Locate
ndhH gene − 120465 121676 1212 Locate
rps15 gene − 121743 122015 273 Locate
ycf1 gene − 122209 127845 5637 Locate
trnN-GUU gene + 128064 128135 72 Locate
trnR-ACG gene − 128684 128757 74 Locate
rrn5 gene − 128992 129112 121 Locate
rrn4.5 gene − 129360 129462 103 Locate
rrn23 gene − 129561 132372 2812 Locate
trnA-UGC gene − 132542 133427 886 Locate
trnI-GAU gene − 133492 134512 1021 Locate
ycf68 gene − 134064 134357 294 Locate
rrn16 gene − 134811 136301 1491 Locate
trnV-GAC gene − 136528 136599 72 Locate
rps12 gene + 138171 138961 791 Locate
rps7 gene + 139015 139482 468 Locate
ndhB gene + 139811 141968 2158 Locate
trnL-CAA gene + 142511 142591 81 Locate
ycf15 gene − 142851 143099 249 Locate
ycf2 gene − 143190 149999 6810 Locate
trnI-CAU gene + 150088 150161 74 Locate
rpl23 gene + 150321 150602 282 Locate
rpl2 gene + 150621 152102 1482 Locate
Status Available
Accession PQ059325.1
Length 152,202 bp
GC content 38.3%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources