Coordinate-aware organelle record

Scutellaria racemosa chloroplast genome

Available PQ059336.1 152,586 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	75	74
psbA	gene	photosystem-ii	−	379	1438	1059
trnK-UUU	gene	translation-rna	−	1670	4258	2588
matK	gene	other	−	1965	3501	1536
rps16	gene	ribosomal-protein	−	5180	6349	1169
trnQ-UUG	gene	translation-rna	−	7465	7537	72
psbK	gene	photosystem-ii	+	7861	8047	186
psbI	gene	photosystem-ii	+	8444	8555	111
trnS-GCU	gene	translation-rna	−	8674	8762	88
trnG-UCC	gene	translation-rna	+	9456	10219	763
trnR-UCU	gene	translation-rna	+	10393	10465	72
atpA	gene	atp-synthase	−	10561	12085	1524
atpF	gene	atp-synthase	−	12167	13397	1230
atpH	gene	atp-synthase	−	13753	13999	246
atpI	gene	atp-synthase	−	14960	15704	744
rps2	gene	ribosomal-protein	−	16051	16888	837
rpoC2	gene	rna-polymerase	−	16958	21179	4221
rpoC1	gene	rna-polymerase	−	21333	24167	2834
rpoB	gene	rna-polymerase	−	24193	27406	3213
trnC-GCA	gene	translation-rna	+	28579	28650	71
petN	gene	cytochrome	+	29360	29450	90
psbM	gene	photosystem-ii	−	30450	30555	105
trnD-GUC	gene	translation-rna	−	31082	31156	74
trnY-GUA	gene	translation-rna	−	31269	31353	84
trnE-UUC	gene	translation-rna	−	31412	31485	73
trnT-GGU	gene	translation-rna	+	32073	32145	72
psbD	gene	photosystem-ii	+	33459	34521	1062
psbC	gene	photosystem-ii	+	34468	35890	1422
trnS-UGA	gene	translation-rna	−	36133	36225	92
psbZ	gene	photosystem-ii	+	36545	36734	189
trnG-GCC	gene	translation-rna	+	37010	37081	71
trnfM-CAU	gene	translation-rna	−	37236	37310	74
rps14	gene	ribosomal-protein	−	37459	37762	303
psaB	gene	photosystem-i	−	37889	40094	2205
psaA	gene	photosystem-i	−	40119	42372	2253
ycf3	gene	other	−	43062	44991	1929
trnS-GGA	gene	translation-rna	+	45877	45964	87
rps4	gene	ribosomal-protein	−	46234	46840	606
trnT-UGU	gene	translation-rna	−	47174	47247	73
trnL-UAA	gene	translation-rna	+	47932	48493	561
trnF-GAA	gene	translation-rna	+	48805	48878	73
ndhJ	gene	nad-dehydrogenase	−	49536	50013	477
ndhK	gene	nad-dehydrogenase	−	50120	50798	678
ndhC	gene	nad-dehydrogenase	−	50850	51213	363
trnV-UAC	gene	translation-rna	−	52210	52863	653
trnM-CAU	gene	translation-rna	+	53044	53117	73
atpE	gene	atp-synthase	−	53332	53734	402
atpB	gene	atp-synthase	−	53730	55218	1488
rbcL	gene	other	+	55967	57431	1464
accD	gene	other	+	58148	59615	1467
psaI	gene	photosystem-i	+	60347	60458	111
ycf4	gene	other	+	60891	61446	555
cemA	gene	other	+	62187	62787	600
petA	gene	cytochrome	+	62993	63956	963
psbJ	gene	photosystem-ii	−	64971	65094	123
psbL	gene	photosystem-ii	−	65227	65449	222
psbF	gene	photosystem-ii	−	65367	65487	120
psbE	gene	photosystem-ii	−	65501	65753	252
petL	gene	cytochrome	+	66661	66757	96
petG	gene	cytochrome	+	66932	67046	114
trnW-CCA	gene	translation-rna	−	67164	67238	74
trnP-UGG	gene	translation-rna	−	67407	67481	74
psaJ	gene	photosystem-i	+	67754	67889	135
rpl33	gene	ribosomal-protein	+	68351	68552	201
rps18	gene	ribosomal-protein	+	68726	69032	306
rpl20	gene	ribosomal-protein	−	69266	69653	387
rps12	gene	ribosomal-protein	−	70450	98572	28122
rps12	gene	ribosomal-protein	+	70450	139352	68902
clpP	gene	other	−	70707	72647	1940
psbB	gene	photosystem-ii	+	73125	74652	1527
psbT	gene	photosystem-ii	+	74843	74945	102
psbN	gene	photosystem-ii	−	75019	75151	132
psbH	gene	photosystem-ii	+	75254	75476	222
petB	gene	cytochrome	+	75600	76968	1368
petD	gene	cytochrome	+	77152	78339	1187
rpoA	gene	rna-polymerase	−	78508	79522	1014
rps11	gene	ribosomal-protein	−	79593	80010	417
rpl36	gene	ribosomal-protein	−	80111	80225	114
infA	gene	other	−	80320	80554	234
rps8	gene	ribosomal-protein	−	80672	81083	411
rpl14	gene	ribosomal-protein	−	81248	81617	369
rpl16	gene	ribosomal-protein	−	81744	82977	1233
rps3	gene	ribosomal-protein	−	83131	83794	663
rpl22	gene	ribosomal-protein	−	83795	84251	456
rps19	gene	ribosomal-protein	−	84310	84589	279
rpl2	gene	ribosomal-protein	−	84643	86126	1483
rpl23	gene	ribosomal-protein	−	86144	86426	282
trnI-CAU	gene	translation-rna	−	86585	86659	74
ycf2	gene	other	+	86747	93557	6810
ycf15	gene	other	+	93647	93896	249
trnL-CAA	gene	translation-rna	−	94151	94232	81
ndhB	gene	nad-dehydrogenase	−	94774	96986	2212
rps7	gene	ribosomal-protein	−	97260	97728	468
trnV-GAC	gene	translation-rna	+	100138	100210	72
rrn16	gene	ribosomal-rna	+	100437	101928	1491
trnI-GAU	gene	translation-rna	+	102226	103247	1021
trnA-UGC	gene	translation-rna	+	103311	104198	887
rrn23	gene	ribosomal-rna	+	104367	107180	2813
rrn4.5	gene	ribosomal-rna	+	107278	107381	103
rrn5	gene	ribosomal-rna	+	107628	107749	121
trnR-ACG	gene	translation-rna	+	107983	108057	74
trnN-GUU	gene	translation-rna	−	108610	108682	72
ndhF	gene	nad-dehydrogenase	−	109758	111999	2241
rpl32	gene	ribosomal-protein	+	112522	112699	177
trnL-UAG	gene	translation-rna	+	113132	113212	80
ccsA	gene	other	+	113307	114282	975
ndhD	gene	nad-dehydrogenase	−	114518	116042	1524
psaC	gene	photosystem-i	−	116140	116386	246
ndhE	gene	nad-dehydrogenase	−	116647	116953	306
ndhG	gene	nad-dehydrogenase	−	117173	117704	531
ndhI	gene	nad-dehydrogenase	−	118068	118569	501
ndhA	gene	nad-dehydrogenase	−	118650	120751	2101
ndhH	gene	nad-dehydrogenase	−	120752	121934	1182
rps15	gene	ribosomal-protein	−	122036	122309	273
ycf1	gene	other	−	122581	128233	5652
trnN-GUU	gene	translation-rna	+	128451	128523	72
trnR-ACG	gene	translation-rna	−	129076	129150	74
rrn5	gene	ribosomal-rna	−	129384	129505	121
rrn4.5	gene	ribosomal-rna	−	129752	129855	103
rrn23	gene	ribosomal-rna	−	129953	132766	2813
trnA-UGC	gene	translation-rna	−	132935	133822	887
trnI-GAU	gene	translation-rna	−	133886	134907	1021
ycf68	gene	other	−	134512	134752	240
rrn16	gene	ribosomal-rna	−	135205	136696	1491
trnV-GAC	gene	translation-rna	−	136923	136995	72
rps7	gene	ribosomal-protein	+	139405	139873	468
ndhB	gene	nad-dehydrogenase	+	140147	142359	2212
trnL-CAA	gene	translation-rna	+	142901	142982	81
ycf15	gene	other	−	143237	143486	249
ycf2	gene	other	−	143576	150386	6810
trnI-CAU	gene	translation-rna	+	150474	150548	74
rpl23	gene	ribosomal-protein	+	150707	150989	282
rpl2	gene	ribosomal-protein	+	151007	152490	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059336.1DNA · accDPQ059336DNA · atpBPQ059336DNA · matKPQ059336DNA · ndhFPQ059336DNA · psbAPQ059336DNA · rbcLPQ059336DNA · rps12PQ059336DNA · ycf1PQ059336