Coordinate-aware organelle record

Scutellaria raddeana chloroplast genome

Available PQ059237.1 151,891 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	374	1433	1059
trnK-UUU	gene	translation-rna	−	1674	4251	2577
matK	gene	other	−	1958	3485	1527
rps16	gene	ribosomal-protein	−	5149	6307	1158
trnQ-UUG	gene	translation-rna	−	7419	7491	72
psbK	gene	photosystem-ii	+	7815	8001	186
psbI	gene	photosystem-ii	+	8378	8489	111
trnS-GCU	gene	translation-rna	−	8607	8695	88
trnG-UCC	gene	translation-rna	+	9397	10155	758
trnR-UCU	gene	translation-rna	+	10329	10401	72
atpA	gene	atp-synthase	−	10497	12021	1524
atpF	gene	atp-synthase	−	12102	13331	1229
atpH	gene	atp-synthase	−	13692	13938	246
atpI	gene	atp-synthase	−	14925	15669	744
rps2	gene	ribosomal-protein	−	16013	16724	711
rpoC2	gene	rna-polymerase	−	16937	21143	4206
rpoC1	gene	rna-polymerase	−	21297	24132	2835
rpoB	gene	rna-polymerase	−	24158	27371	3213
trnC-GCA	gene	translation-rna	+	28531	28602	71
petN	gene	cytochrome	+	29313	29403	90
psbM	gene	photosystem-ii	−	30250	30355	105
trnD-GUC	gene	translation-rna	−	30869	30943	74
trnY-GUA	gene	translation-rna	−	31056	31140	84
trnE-UUC	gene	translation-rna	−	31199	31272	73
trnT-GGU	gene	translation-rna	+	31847	31919	72
psbD	gene	photosystem-ii	+	33223	34285	1062
psbC	gene	photosystem-ii	+	34232	35654	1422
trnS-UGA	gene	translation-rna	−	35888	35980	92
psbZ	gene	photosystem-ii	+	36295	36484	189
trnG-GCC	gene	translation-rna	+	36762	36833	71
trnfM-CAU	gene	translation-rna	−	36987	37061	74
rps14	gene	ribosomal-protein	−	37215	37518	303
psaB	gene	photosystem-i	−	37646	39851	2205
psaA	gene	photosystem-i	−	39876	42129	2253
ycf3	gene	other	−	42824	44746	1922
trnS-GGA	gene	translation-rna	+	45627	45714	87
rps4	gene	ribosomal-protein	−	45989	46595	606
trnT-UGU	gene	translation-rna	−	46933	47006	73
trnL-UAA	gene	translation-rna	+	47690	48250	560
trnF-GAA	gene	translation-rna	+	48556	48629	73
ndhJ	gene	nad-dehydrogenase	−	49266	49743	477
ndhK	gene	nad-dehydrogenase	−	49851	50529	678
ndhC	gene	nad-dehydrogenase	−	50582	50945	363
trnV-UAC	gene	translation-rna	−	51922	52575	653
trnM-CAU	gene	translation-rna	+	52763	52836	73
atpE	gene	atp-synthase	−	53029	53431	402
atpB	gene	atp-synthase	−	53427	54924	1497
rbcL	gene	other	+	55675	57139	1464
accD	gene	other	+	57843	59322	1479
psaI	gene	photosystem-i	+	60029	60140	111
ycf4	gene	other	+	60573	61128	555
cemA	gene	other	+	61875	62475	600
petA	gene	cytochrome	+	62681	63644	963
psbJ	gene	photosystem-ii	−	64649	64772	123
psbL	gene	photosystem-ii	−	64905	65022	117
psbF	gene	photosystem-ii	−	65045	65165	120
psbE	gene	photosystem-ii	−	65179	65431	252
petL	gene	cytochrome	+	66305	66401	96
petG	gene	cytochrome	+	66575	66689	114
trnW-CCA	gene	translation-rna	−	66807	66881	74
trnP-UGG	gene	translation-rna	−	67050	67124	74
psaJ	gene	photosystem-i	+	67395	67530	135
rpl33	gene	ribosomal-protein	+	68007	68208	201
rps18	gene	ribosomal-protein	+	68382	68688	306
rpl20	gene	ribosomal-protein	−	68922	69309	387
rps12	gene	ribosomal-protein	−	70086	98160	28074
rps12	gene	ribosomal-protein	+	70086	138651	68565
clpP	gene	other	−	70353	72283	1930
psbB	gene	photosystem-ii	+	72751	74278	1527
psbT	gene	photosystem-ii	+	74468	74576	108
psbN	gene	photosystem-ii	−	74636	74768	132
psbH	gene	photosystem-ii	+	74871	75093	222
petB	gene	cytochrome	+	75217	76590	1373
petD	gene	cytochrome	+	76772	77978	1206
rpoA	gene	rna-polymerase	−	78332	79133	801
rps11	gene	ribosomal-protein	−	79204	79621	417
rpl36	gene	ribosomal-protein	−	79722	79836	114
infA	gene	other	−	79930	80164	234
rps8	gene	ribosomal-protein	−	80287	80698	411
rpl14	gene	ribosomal-protein	−	80850	81219	369
rpl16	gene	ribosomal-protein	−	81345	82572	1227
rps3	gene	ribosomal-protein	−	82727	83390	663
rpl22	gene	ribosomal-protein	−	83391	83847	456
rps19	gene	ribosomal-protein	−	83906	84185	279
rpl2	gene	ribosomal-protein	−	84238	85720	1482
rpl23	gene	ribosomal-protein	−	85738	86020	282
trnI-CAU	gene	translation-rna	−	86179	86253	74
ycf2	gene	other	+	86341	93151	6810
ycf15	gene	other	+	93241	93490	249
trnL-CAA	gene	translation-rna	−	93749	93830	81
ndhB	gene	nad-dehydrogenase	−	94372	96584	2212
rps7	gene	ribosomal-protein	−	96858	97326	468
trnV-GAC	gene	translation-rna	+	99731	99803	72
rrn16	gene	ribosomal-rna	+	100029	101520	1491
trnI-GAU	gene	translation-rna	+	101818	102839	1021
trnA-UGC	gene	translation-rna	+	102903	103788	885
rrn23	gene	ribosomal-rna	+	103957	106769	2812
rrn4.5	gene	ribosomal-rna	+	106867	106970	103
rrn5	gene	ribosomal-rna	+	107217	107338	121
trnR-ACG	gene	translation-rna	+	107572	107646	74
trnN-GUU	gene	translation-rna	−	108194	108266	72
ndhF	gene	nad-dehydrogenase	−	109322	111584	2262
rpl32	gene	ribosomal-protein	+	111910	112087	177
trnL-UAG	gene	translation-rna	+	112534	112614	80
ccsA	gene	other	+	112703	113678	975
ndhD	gene	nad-dehydrogenase	−	113916	115419	1503
psaC	gene	photosystem-i	−	115547	115793	246
ndhE	gene	nad-dehydrogenase	−	116041	116347	306
ndhG	gene	nad-dehydrogenase	−	116563	117094	531
ndhI	gene	nad-dehydrogenase	−	117459	117960	501
ndhA	gene	nad-dehydrogenase	−	118040	120162	2122
ndhH	gene	nad-dehydrogenase	−	120163	121345	1182
rps15	gene	ribosomal-protein	−	121441	121714	273
ycf1	gene	other	−	121909	127546	5637
trnN-GUU	gene	translation-rna	+	127764	127836	72
trnR-ACG	gene	translation-rna	−	128384	128458	74
rrn5	gene	ribosomal-rna	−	128692	128813	121
rrn4.5	gene	ribosomal-rna	−	129060	129163	103
rrn23	gene	ribosomal-rna	−	129261	132073	2812
trnA-UGC	gene	translation-rna	−	132242	133127	885
trnI-GAU	gene	translation-rna	−	133191	134212	1021
ycf68	gene	other	−	133763	134057	294
rrn16	gene	ribosomal-rna	−	134510	136001	1491
trnV-GAC	gene	translation-rna	−	136227	136299	72
rps7	gene	ribosomal-protein	+	138704	139172	468
ndhB	gene	nad-dehydrogenase	+	139446	141658	2212
trnL-CAA	gene	translation-rna	+	142200	142281	81
ycf15	gene	other	−	142540	142789	249
ycf2	gene	other	−	142879	149689	6810
trnI-CAU	gene	translation-rna	+	149777	149851	74
rpl23	gene	ribosomal-protein	+	150010	150292	282
rpl2	gene	ribosomal-protein	+	150310	151792	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059237.1DNA · accDPQ059237DNA · atpBPQ059237DNA · matKPQ059237DNA · ndhFPQ059237DNA · psbAPQ059237DNA · rbcLPQ059237DNA · rps12PQ059237DNA · ycf1PQ059237