Coordinate-aware organelle record

Scutellaria ramosissima chloroplast genome

Available PQ059244.1 151,830 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	373	1432	1059
trnK-UUU	gene	translation-rna	−	1673	4255	2582
matK	gene	other	−	1963	3490	1527
rps16	gene	ribosomal-protein	−	5154	6315	1161
trnQ-UUG	gene	translation-rna	−	7059	7131	72
psbK	gene	photosystem-ii	+	7455	7641	186
psbI	gene	photosystem-ii	+	8030	8141	111
trnS-GCU	gene	translation-rna	−	8259	8347	88
trnG-UCC	gene	translation-rna	+	9050	9807	757
trnR-UCU	gene	translation-rna	+	9972	10044	72
atpA	gene	atp-synthase	−	10140	11664	1524
atpF	gene	atp-synthase	−	11745	12975	1230
atpH	gene	atp-synthase	−	13335	13581	246
atpI	gene	atp-synthase	−	14568	15312	744
rps2	gene	ribosomal-protein	−	15658	16369	711
rpoC2	gene	rna-polymerase	−	16583	20789	4206
rpoC1	gene	rna-polymerase	−	20943	23780	2837
rpoB	gene	rna-polymerase	−	23806	27019	3213
trnC-GCA	gene	translation-rna	+	28179	28250	71
petN	gene	cytochrome	+	28964	29054	90
psbM	gene	photosystem-ii	−	30082	30187	105
trnD-GUC	gene	translation-rna	−	30712	30786	74
trnY-GUA	gene	translation-rna	−	30899	30983	84
trnE-UUC	gene	translation-rna	−	31042	31115	73
trnT-GGU	gene	translation-rna	+	31690	31762	72
psbD	gene	photosystem-ii	+	33068	34130	1062
psbC	gene	photosystem-ii	+	34077	35499	1422
trnS-UGA	gene	translation-rna	−	35734	35826	92
psbZ	gene	photosystem-ii	+	36141	36330	189
trnG-GCC	gene	translation-rna	+	36606	36677	71
trnfM-CAU	gene	translation-rna	−	36828	36902	74
rps14	gene	ribosomal-protein	−	37051	37354	303
psaB	gene	photosystem-i	−	37482	39687	2205
psaA	gene	photosystem-i	−	39712	41965	2253
ycf3	gene	other	−	42657	44586	1929
trnS-GGA	gene	translation-rna	+	45468	45555	87
rps4	gene	ribosomal-protein	−	45830	46436	606
trnT-UGU	gene	translation-rna	−	46782	46855	73
trnL-UAA	gene	translation-rna	+	47536	48096	560
trnF-GAA	gene	translation-rna	+	48396	48469	73
ndhJ	gene	nad-dehydrogenase	−	49117	49594	477
ndhK	gene	nad-dehydrogenase	−	49702	50380	678
ndhC	gene	nad-dehydrogenase	−	50433	50796	363
trnV-UAC	gene	translation-rna	−	51781	52434	653
trnM-CAU	gene	translation-rna	+	52622	52695	73
atpE	gene	atp-synthase	−	52888	53290	402
atpB	gene	atp-synthase	−	53286	54783	1497
rbcL	gene	other	+	55534	56998	1464
accD	gene	other	+	57711	59190	1479
psaI	gene	photosystem-i	+	59896	60007	111
ycf4	gene	other	+	60440	60995	555
cemA	gene	other	+	61742	62342	600
petA	gene	cytochrome	+	62548	63511	963
psbJ	gene	photosystem-ii	−	64519	64642	123
psbL	gene	photosystem-ii	−	64775	64997	222
psbF	gene	photosystem-ii	−	64915	65035	120
psbE	gene	photosystem-ii	−	65049	65301	252
petL	gene	cytochrome	+	66176	66272	96
petG	gene	cytochrome	+	66447	66561	114
trnW-CCA	gene	translation-rna	−	66679	66753	74
trnP-UGG	gene	translation-rna	−	66922	66996	74
psaJ	gene	photosystem-i	+	67267	67402	135
rpl33	gene	ribosomal-protein	+	67878	68079	201
rps18	gene	ribosomal-protein	+	68253	68559	306
rpl20	gene	ribosomal-protein	−	68793	69180	387
rps12	gene	ribosomal-protein	−	69974	98025	28051
rps12	gene	ribosomal-protein	+	69974	138598	68624
clpP	gene	other	−	70229	72158	1929
psbB	gene	photosystem-ii	+	72609	74136	1527
psbT	gene	photosystem-ii	+	74327	74435	108
psbN	gene	photosystem-ii	−	74495	74627	132
psbH	gene	photosystem-ii	+	74730	74952	222
petB	gene	cytochrome	+	75076	76445	1369
petD	gene	cytochrome	+	76627	77834	1207
rpoA	gene	rna-polymerase	−	78188	78989	801
rps11	gene	ribosomal-protein	−	79060	79477	417
rpl36	gene	ribosomal-protein	−	79578	79692	114
infA	gene	other	−	79786	80020	234
rps8	gene	ribosomal-protein	−	80143	80554	411
rpl14	gene	ribosomal-protein	−	80706	81075	369
rpl16	gene	ribosomal-protein	−	81201	82435	1234
rps3	gene	ribosomal-protein	−	82590	83253	663
rpl22	gene	ribosomal-protein	−	83254	83710	456
rps19	gene	ribosomal-protein	−	83769	84048	279
rpl2	gene	ribosomal-protein	−	84102	85584	1482
rpl23	gene	ribosomal-protein	−	85602	85884	282
trnI-CAU	gene	translation-rna	−	86043	86117	74
ycf2	gene	other	+	86205	93006	6801
ycf15	gene	other	+	93096	93345	249
trnL-CAA	gene	translation-rna	−	93604	93685	81
ndhB	gene	nad-dehydrogenase	−	94227	96385	2158
rps7	gene	ribosomal-protein	−	96713	97181	468
trnV-GAC	gene	translation-rna	+	99596	99668	72
rrn16	gene	ribosomal-rna	+	99894	101385	1491
trnI-GAU	gene	translation-rna	+	101683	102704	1021
trnA-UGC	gene	translation-rna	+	102768	103658	890
rrn23	gene	ribosomal-rna	+	103827	106639	2812
rrn4.5	gene	ribosomal-rna	+	106737	106840	103
rrn5	gene	ribosomal-rna	+	107087	107208	121
trnR-ACG	gene	translation-rna	+	107442	107516	74
trnN-GUU	gene	translation-rna	−	108064	108136	72
ndhF	gene	nad-dehydrogenase	−	109192	111454	2262
rpl32	gene	ribosomal-protein	+	111781	111958	177
trnL-UAG	gene	translation-rna	+	112405	112485	80
ccsA	gene	other	+	112586	113561	975
ndhD	gene	nad-dehydrogenase	−	113834	115364	1530
psaC	gene	photosystem-i	−	115464	115710	246
ndhE	gene	nad-dehydrogenase	−	115965	116271	306
ndhG	gene	nad-dehydrogenase	−	116487	117018	531
ndhI	gene	nad-dehydrogenase	−	117384	117885	501
ndhA	gene	nad-dehydrogenase	−	117970	120092	2122
ndhH	gene	nad-dehydrogenase	−	120093	121305	1212
rps15	gene	ribosomal-protein	−	121371	121644	273
ycf1	gene	other	−	121841	127478	5637
trnN-GUU	gene	translation-rna	+	127696	127768	72
trnR-ACG	gene	translation-rna	−	128316	128390	74
rrn5	gene	ribosomal-rna	−	128624	128745	121
rrn4.5	gene	ribosomal-rna	−	128992	129095	103
rrn23	gene	ribosomal-rna	−	129193	132005	2812
trnA-UGC	gene	translation-rna	−	132174	133064	890
trnI-GAU	gene	translation-rna	−	133128	134149	1021
ycf68	gene	other	−	133700	133994	294
rrn16	gene	ribosomal-rna	−	134447	135938	1491
trnV-GAC	gene	translation-rna	−	136164	136236	72
rps7	gene	ribosomal-protein	+	138651	139119	468
ndhB	gene	nad-dehydrogenase	+	139447	141605	2158
trnL-CAA	gene	translation-rna	+	142147	142228	81
ycf15	gene	other	−	142487	142736	249
ycf2	gene	other	−	142826	149627	6801
trnI-CAU	gene	translation-rna	+	149715	149789	74
rpl23	gene	ribosomal-protein	+	149948	150230	282
rpl2	gene	ribosomal-protein	+	150248	151730	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059244.1DNA · accDPQ059244DNA · atpBPQ059244DNA · matKPQ059244DNA · ndhFPQ059244DNA · psbAPQ059244DNA · rbcLPQ059244DNA · rps12PQ059244DNA · ycf1PQ059244