Coordinate-aware organelle record

Scutellaria rehderiana chloroplast genome

Available MT982397.1 151,827 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	75	74
psbA	gene	photosystem-ii	−	377	1436	1059
trnK-UUU	gene	translation-rna	−	1683	4257	2574
matK	gene	other	−	1972	3502	1530
rps16	gene	ribosomal-protein	−	5151	6317	1166
trnQ-UUG	gene	translation-rna	−	7422	7494	72
psbK	gene	photosystem-ii	+	7815	8001	186
psbI	gene	photosystem-ii	+	8403	8514	111
trnS-GCU	gene	translation-rna	−	8629	8717	88
trnG-UCC	gene	translation-rna	+	9344	10098	754
trnR-UCU	gene	translation-rna	+	10272	10344	72
atpA	gene	atp-synthase	−	10440	11964	1524
atpF	gene	atp-synthase	−	12053	13282	1229
atpH	gene	atp-synthase	−	13643	13889	246
atpI	gene	atp-synthase	−	14863	15607	744
rps2	gene	ribosomal-protein	−	15951	16662	711
rpoC2	gene	rna-polymerase	−	16875	21081	4206
rpoC1	gene	rna-polymerase	−	21235	24087	2852
rpoB	gene	rna-polymerase	−	24092	27305	3213
trnC-GCA	gene	translation-rna	+	28466	28537	71
petN	gene	cytochrome	+	28825	28915	90
psbM	gene	photosystem-ii	−	30014	30119	105
trnD-GUC	gene	translation-rna	−	30645	30719	74
trnY-GUA	gene	translation-rna	−	30837	30921	84
trnT-GGU	gene	translation-rna	+	31621	31693	72
psbD	gene	photosystem-ii	+	33007	34069	1062
psbC	gene	photosystem-ii	+	34016	35438	1422
trnS-UGA	gene	translation-rna	−	35672	35764	92
psbZ	gene	photosystem-ii	+	36080	36269	189
trnG-GCC	gene	translation-rna	+	36544	36615	71
trnfM-CAU	gene	translation-rna	−	36762	36836	74
rps14	gene	ribosomal-protein	−	36985	37288	303
psaB	gene	photosystem-i	−	37415	39620	2205
psaA	gene	photosystem-i	−	39645	41898	2253
ycf3	gene	other	−	42586	44511	1925
trnS-GGA	gene	translation-rna	+	45405	45492	87
rps4	gene	ribosomal-protein	−	45773	46379	606
trnT-UGU	gene	translation-rna	−	46728	46801	73
trnL-UAA	gene	translation-rna	+	47491	48067	576
trnF-GAA	gene	translation-rna	+	48377	48450	73
ndhJ	gene	nad-dehydrogenase	−	49097	49574	477
ndhK	gene	nad-dehydrogenase	−	49682	50360	678
ndhC	gene	nad-dehydrogenase	−	50412	50775	363
trnV-UAC	gene	translation-rna	−	51718	52371	653
trnM-CAU	gene	translation-rna	+	52559	52632	73
atpE	gene	atp-synthase	−	52840	53242	402
atpB	gene	atp-synthase	−	53238	54735	1497
rbcL	gene	other	+	55499	56942	1443
accD	gene	other	+	57657	59136	1479
psaI	gene	photosystem-i	+	59854	59965	111
ycf4	gene	other	+	60398	60953	555
cemA	gene	other	+	61584	62295	711
petA	gene	cytochrome	+	62496	63459	963
psbJ	gene	photosystem-ii	−	64467	64590	123
psbL	gene	photosystem-ii	−	64723	64840	117
psbF	gene	photosystem-ii	−	64863	64983	120
psbE	gene	photosystem-ii	−	64997	65249	252
petL	gene	cytochrome	+	66117	66213	96
petG	gene	cytochrome	+	66388	66502	114
trnW-CCA	gene	translation-rna	−	66620	66694	74
trnP-UGG	gene	translation-rna	−	66863	66937	74
psaJ	gene	photosystem-i	+	67207	67342	135
rpl33	gene	ribosomal-protein	+	67817	68018	201
rps18	gene	ribosomal-protein	+	68192	68498	306
rpl20	gene	ribosomal-protein	−	68732	69119	387
rps12	gene	ribosomal-protein	−	69904	98015	28111
rps12	gene	ribosomal-protein	+	69904	138574	68670
clpP	gene	other	−	70171	72112	1941
psbB	gene	photosystem-ii	+	72569	74096	1527
psbT	gene	photosystem-ii	+	74287	74395	108
psbN	gene	photosystem-ii	−	74455	74587	132
psbH	gene	photosystem-ii	+	74690	74912	222
petB	gene	cytochrome	+	75036	76405	1369
petD	gene	cytochrome	+	76593	77790	1197
rpoA	gene	rna-polymerase	−	78165	78966	801
rps11	gene	ribosomal-protein	−	79037	79454	417
rpl36	gene	ribosomal-protein	−	79555	79669	114
infA	gene	other	−	79763	79997	234
rps8	gene	ribosomal-protein	−	80119	80530	411
rpl14	gene	ribosomal-protein	−	80686	81055	369
rpl16	gene	ribosomal-protein	−	81181	82414	1233
rps3	gene	ribosomal-protein	−	82569	83232	663
rpl22	gene	ribosomal-protein	−	83233	83689	456
rps19	gene	ribosomal-protein	−	83748	84027	279
rpl2	gene	ribosomal-protein	−	84083	85565	1482
rpl23	gene	ribosomal-protein	−	85583	85865	282
trnI-CAU	gene	translation-rna	−	86024	86098	74
ycf2	gene	other	+	86186	92996	6810
ycf15	gene	other	+	93086	93335	249
trnL-CAA	gene	translation-rna	−	93594	93675	81
ndhB	gene	nad-dehydrogenase	−	94217	96429	2212
rps7	gene	ribosomal-protein	−	96703	97171	468
trnV-GAC	gene	translation-rna	+	99586	99658	72
rrn16	gene	ribosomal-rna	+	99884	101375	1491
trnI-GAU	gene	translation-rna	+	101673	102693	1020
trnA-UGC	gene	translation-rna	+	102757	103646	889
rrn23	gene	ribosomal-rna	+	103815	106627	2812
rrn4.5	gene	ribosomal-rna	+	106725	106828	103
rrn5	gene	ribosomal-rna	+	107075	107196	121
trnR-ACG	gene	translation-rna	+	107430	107504	74
trnN-GUU	gene	translation-rna	−	108060	108132	72
ndhF	gene	nad-dehydrogenase	−	109208	111449	2241
rpl32	gene	ribosomal-protein	+	111961	112138	177
trnL-UAG	gene	translation-rna	+	112423	112503	80
ccsA	gene	other	+	112597	113572	975
ndhD	gene	nad-dehydrogenase	−	113805	115335	1530
psaC	gene	photosystem-i	−	115435	115681	246
ndhE	gene	nad-dehydrogenase	−	115936	116242	306
ndhG	gene	nad-dehydrogenase	−	116463	116994	531
ndhI	gene	nad-dehydrogenase	−	117356	117857	501
ndhA	gene	nad-dehydrogenase	−	117937	120044	2107
ndhH	gene	nad-dehydrogenase	−	120045	121227	1182
rps15	gene	ribosomal-protein	−	121323	121596	273
ycf1	gene	other	−	121790	127337	5547
trnN-GUU	gene	translation-rna	+	127666	127738	72
trnR-ACG	gene	translation-rna	−	128294	128368	74
rrn5	gene	ribosomal-rna	−	128602	128723	121
rrn4.5	gene	ribosomal-rna	−	128970	129073	103
rrn23	gene	ribosomal-rna	−	129171	131983	2812
trnA-UGC	gene	translation-rna	−	132152	133041	889
trnI-GAU	gene	translation-rna	−	133105	134125	1020
rrn16	gene	ribosomal-rna	−	134423	135914	1491
trnV-GAC	gene	translation-rna	−	136140	136212	72
rps7	gene	ribosomal-protein	+	138627	139095	468
ndhB	gene	nad-dehydrogenase	+	139369	141581	2212
trnL-CAA	gene	translation-rna	+	142123	142204	81
ycf15	gene	other	−	142463	142712	249
ycf2	gene	other	−	142802	149612	6810
trnI-CAU	gene	translation-rna	+	149700	149774	74
rpl23	gene	ribosomal-protein	+	149933	150215	282
rpl2	gene	ribosomal-protein	+	150233	151715	1482
rps19	gene	ribosomal-protein	+	151771	151827	56

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMT982397.1DNA · accDMT982397DNA · atpBMT982397DNA · matKMT982397DNA · ndhFMT982397DNA · psbAMT982397DNA · rbcLMT982397DNA · rps12MT982397DNA · ycf1MT982397