Scutellaria resinosa chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PQ058263.1 · 3–76 bp · −
psbA · PQ058263.1 · 382–1,440 bp · −
trnK-UUU · PQ058263.1 · 1,668–4,250 bp · −
matK · PQ058263.1 · 1,963–3,498 bp · −
rps16 · PQ058263.1 · 5,138–6,284 bp · −
trnQ-UUG · PQ058263.1 · 7,437–7,508 bp · −
trnS-GCU · PQ058263.1 · 8,633–8,720 bp · −
atpA · PQ058263.1 · 10,545–12,068 bp · −
atpF · PQ058263.1 · 12,153–13,380 bp · −
atpH · PQ058263.1 · 13,736–13,981 bp · −
atpI · PQ058263.1 · 14,980–15,723 bp · −
rps2 · PQ058263.1 · 16,072–16,908 bp · −
rpoC2 · PQ058263.1 · 16,999–21,192 bp · −
rpoC1 · PQ058263.1 · 21,347–24,180 bp · −
rpoB · PQ058263.1 · 24,207–27,419 bp · −
psbM · PQ058263.1 · 30,469–30,573 bp · −
trnD-GUC · PQ058263.1 · 31,099–31,172 bp · −
trnY-GUA · PQ058263.1 · 31,286–31,369 bp · −
trnE-UUC · PQ058263.1 · 31,429–31,501 bp · −
trnS-UGA · PQ058263.1 · 36,147–36,238 bp · −
trnfM-CAU · PQ058263.1 · 37,239–37,312 bp · −
rps14 · PQ058263.1 · 37,462–37,764 bp · −
psaB · PQ058263.1 · 37,892–40,096 bp · −
psaA · PQ058263.1 · 40,122–42,374 bp · −
ycf3 · PQ058263.1 · 43,085–45,008 bp · −
rps4 · PQ058263.1 · 46,266–46,871 bp · −
trnT-UGU · PQ058263.1 · 47,212–47,284 bp · −
ndhJ · PQ058263.1 · 49,523–49,999 bp · −
ndhK · PQ058263.1 · 50,107–50,784 bp · −
ndhC · PQ058263.1 · 50,838–51,200 bp · −
trnV-UAC · PQ058263.1 · 52,188–52,840 bp · −
atpE · PQ058263.1 · 53,303–53,704 bp · −
atpB · PQ058263.1 · 53,701–55,197 bp · −
psbJ · PQ058263.1 · 64,900–65,022 bp · −
psbL · PQ058263.1 · 65,156–65,377 bp · −
psbF · PQ058263.1 · 65,296–65,415 bp · −
psbE · PQ058263.1 · 65,430–65,681 bp · −
trnW-CCA · PQ058263.1 · 67,093–67,166 bp · −
trnP-UGG · PQ058263.1 · 67,330–67,403 bp · −
rpl20 · PQ058263.1 · 69,196–69,582 bp · −
rps12 · PQ058263.1 · 70,379–70,492 bp · −
rps12 · PQ058263.1 · 97,646–98,436 bp · −
clpP · PQ058263.1 · 70,633–72,576 bp · −
psbN · PQ058263.1 · 74,935–75,066 bp · −
rpoA · PQ058263.1 · 78,435–79,448 bp · −
rps11 · PQ058263.1 · 79,520–79,936 bp · −
rpl36 · PQ058263.1 · 80,038–80,151 bp · −
infA · PQ058263.1 · 80,245–80,478 bp · −
rps8 · PQ058263.1 · 80,598–81,008 bp · −
rpl14 · PQ058263.1 · 81,166–81,534 bp · −
rpl16 · PQ058263.1 · 81,664–82,847 bp · −
rps3 · PQ058263.1 · 83,003–83,665 bp · −
rpl22 · PQ058263.1 · 83,667–84,122 bp · −
rps19 · PQ058263.1 · 84,186–84,464 bp · −
rpl2 · PQ058263.1 · 84,519–86,001 bp · −
rpl23 · PQ058263.1 · 86,020–86,301 bp · −
trnI-CAU · PQ058263.1 · 86,461–86,534 bp · −
trnL-CAA · PQ058263.1 · 94,016–94,096 bp · −
ndhB · PQ058263.1 · 94,639–96,850 bp · −
rps7 · PQ058263.1 · 97,125–97,592 bp · −
trnN-GUU · PQ058263.1 · 108,447–108,518 bp · −
ndhF · PQ058263.1 · 109,595–111,835 bp · −
ndhD · PQ058263.1 · 114,364–115,887 bp · −
psaC · PQ058263.1 · 115,994–116,239 bp · −
ndhE · PQ058263.1 · 116,502–116,807 bp · −
ndhG · PQ058263.1 · 117,028–117,558 bp · −
ndhI · PQ058263.1 · 117,924–118,424 bp · −
ndhA · PQ058263.1 · 118,505–120,602 bp · −
ndhH · PQ058263.1 · 120,604–121,785 bp · −
rps15 · PQ058263.1 · 121,882–122,154 bp · −
ycf1 · PQ058263.1 · 122,428–127,995 bp · −
trnR-ACG · PQ058263.1 · 128,832–128,905 bp · −
rrn5 · PQ058263.1 · 129,130–129,250 bp · −
rrn4.5 · PQ058263.1 · 129,498–129,600 bp · −
rrn23 · PQ058263.1 · 129,699–132,511 bp · −
trnA-UGC · PQ058263.1 · 132,674–133,560 bp · −
trnI-GAU · PQ058263.1 · 133,625–134,645 bp · −
ycf68 · PQ058263.1 · 134,251–134,490 bp · −
rrn16 · PQ058263.1 · 134,944–136,434 bp · −
trnV-GAC · PQ058263.1 · 136,662–136,733 bp · −
ycf15 · PQ058263.1 · 142,970–143,218 bp · −
ycf2 · PQ058263.1 · 143,309–150,109 bp · −
psbK · PQ058263.1 · 7,833–8,018 bp · +
psbI · PQ058263.1 · 8,414–8,524 bp · +
trnG-UCC · PQ058263.1 · 9,412–10,169 bp · +
trnR-UCU · PQ058263.1 · 10,377–10,448 bp · +
trnC-GCA · PQ058263.1 · 28,577–28,647 bp · +
petN · PQ058263.1 · 29,352–29,441 bp · +
trnT-GGU · PQ058263.1 · 32,091–32,162 bp · +
psbD · PQ058263.1 · 33,466–34,527 bp · +
psbC · PQ058263.1 · 34,475–35,896 bp · +
psbZ · PQ058263.1 · 36,558–36,746 bp · +
trnG-GCC · PQ058263.1 · 37,018–37,088 bp · +
trnS-GGA · PQ058263.1 · 45,895–45,981 bp · +
trnL-UAA · PQ058263.1 · 47,920–48,480 bp · +
trnF-GAA · PQ058263.1 · 48,786–48,858 bp · +
trnM-CAU · PQ058263.1 · 53,021–53,093 bp · +
rbcL · PQ058263.1 · 55,955–57,418 bp · +
accD · PQ058263.1 · 58,099–59,598 bp · +
psaI · PQ058263.1 · 60,306–60,416 bp · +
ycf4 · PQ058263.1 · 60,843–61,397 bp · +
cemA · PQ058263.1 · 62,138–62,737 bp · +
petA · PQ058263.1 · 62,943–63,905 bp · +
petL · PQ058263.1 · 66,590–66,685 bp · +
petG · PQ058263.1 · 66,861–66,974 bp · +
psaJ · PQ058263.1 · 67,677–67,811 bp · +
rpl33 · PQ058263.1 · 68,283–68,483 bp · +
rps18 · PQ058263.1 · 68,657–68,962 bp · +
rps12 · PQ058263.1 · 138,296–139,086 bp · +
psbB · PQ058263.1 · 73,046–74,572 bp · +
psbT · PQ058263.1 · 74,764–74,865 bp · +
psbH · PQ058263.1 · 75,170–75,391 bp · +
petB · PQ058263.1 · 75,516–76,883 bp · +
petD · PQ058263.1 · 77,072–78,272 bp · +
ycf2 · PQ058263.1 · 86,623–93,423 bp · +
ycf15 · PQ058263.1 · 93,514–93,762 bp · +
trnV-GAC · PQ058263.1 · 99,999–100,070 bp · +
rrn16 · PQ058263.1 · 100,298–101,788 bp · +
trnI-GAU · PQ058263.1 · 102,087–103,107 bp · +
trnA-UGC · PQ058263.1 · 103,172–104,058 bp · +
rrn23 · PQ058263.1 · 104,221–107,033 bp · +
rrn4.5 · PQ058263.1 · 107,132–107,234 bp · +
rrn5 · PQ058263.1 · 107,482–107,602 bp · +
trnR-ACG · PQ058263.1 · 107,827–107,900 bp · +
rpl32 · PQ058263.1 · 112,358–112,534 bp · +
trnL-UAG · PQ058263.1 · 112,975–113,054 bp · +
ccsA · PQ058263.1 · 113,100–114,125 bp · +
trnN-GUU · PQ058263.1 · 128,214–128,285 bp · +
rps7 · PQ058263.1 · 139,140–139,607 bp · +
ndhB · PQ058263.1 · 139,882–142,093 bp · +
trnL-CAA · PQ058263.1 · 142,636–142,716 bp · +
trnI-CAU · PQ058263.1 · 150,198–150,271 bp · +
rpl23 · PQ058263.1 · 150,431–150,712 bp · +
rpl2 · PQ058263.1 · 150,731–152,213 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Scutellaria resinosa
ANNOTATED PLASTOME
PQ058263.1
152,308 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38077 76154 114231 152308 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU ycf68 rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 3 76 74 Locate
psbA gene − 382 1440 1059 Locate
trnK-UUU gene − 1668 4250 2583 Locate
matK gene − 1963 3498 1536 Locate
rps16 gene − 5138 6284 1147 Locate
trnQ-UUG gene − 7437 7508 72 Locate
psbK gene + 7833 8018 186 Locate
psbI gene + 8414 8524 111 Locate
trnS-GCU gene − 8633 8720 88 Locate
trnG-UCC gene + 9412 10169 758 Locate
trnR-UCU gene + 10377 10448 72 Locate
atpA gene − 10545 12068 1524 Locate
atpF gene − 12153 13380 1228 Locate
atpH gene − 13736 13981 246 Locate
atpI gene − 14980 15723 744 Locate
rps2 gene − 16072 16908 837 Locate
rpoC2 gene − 16999 21192 4194 Locate
rpoC1 gene − 21347 24180 2834 Locate
rpoB gene − 24207 27419 3213 Locate
trnC-GCA gene + 28577 28647 71 Locate
petN gene + 29352 29441 90 Locate
psbM gene − 30469 30573 105 Locate
trnD-GUC gene − 31099 31172 74 Locate
trnY-GUA gene − 31286 31369 84 Locate
trnE-UUC gene − 31429 31501 73 Locate
trnT-GGU gene + 32091 32162 72 Locate
psbD gene + 33466 34527 1062 Locate
psbC gene + 34475 35896 1422 Locate
trnS-UGA gene − 36147 36238 92 Locate
psbZ gene + 36558 36746 189 Locate
trnG-GCC gene + 37018 37088 71 Locate
trnfM-CAU gene − 37239 37312 74 Locate
rps14 gene − 37462 37764 303 Locate
psaB gene − 37892 40096 2205 Locate
psaA gene − 40122 42374 2253 Locate
ycf3 gene − 43085 45008 1924 Locate
trnS-GGA gene + 45895 45981 87 Locate
rps4 gene − 46266 46871 606 Locate
trnT-UGU gene − 47212 47284 73 Locate
trnL-UAA gene + 47920 48480 561 Locate
trnF-GAA gene + 48786 48858 73 Locate
ndhJ gene − 49523 49999 477 Locate
ndhK gene − 50107 50784 678 Locate
ndhC gene − 50838 51200 363 Locate
trnV-UAC gene − 52188 52840 653 Locate
trnM-CAU gene + 53021 53093 73 Locate
atpE gene − 53303 53704 402 Locate
atpB gene − 53701 55197 1497 Locate
rbcL gene + 55955 57418 1464 Locate
accD gene + 58099 59598 1500 Locate
psaI gene + 60306 60416 111 Locate
ycf4 gene + 60843 61397 555 Locate
cemA gene + 62138 62737 600 Locate
petA gene + 62943 63905 963 Locate
psbJ gene − 64900 65022 123 Locate
psbL gene − 65156 65377 222 Locate
psbF gene − 65296 65415 120 Locate
psbE gene − 65430 65681 252 Locate
petL gene + 66590 66685 96 Locate
petG gene + 66861 66974 114 Locate
trnW-CCA gene − 67093 67166 74 Locate
trnP-UGG gene − 67330 67403 74 Locate
psaJ gene + 67677 67811 135 Locate
rpl33 gene + 68283 68483 201 Locate
rps18 gene + 68657 68962 306 Locate
rpl20 gene − 69196 69582 387 Locate
rps12 gene − 70379 70492 114 Locate
clpP gene − 70633 72576 1944 Locate
psbB gene + 73046 74572 1527 Locate
psbT gene + 74764 74865 102 Locate
psbN gene − 74935 75066 132 Locate
psbH gene + 75170 75391 222 Locate
petB gene + 75516 76883 1368 Locate
petD gene + 77072 78272 1201 Locate
rpoA gene − 78435 79448 1014 Locate
rps11 gene − 79520 79936 417 Locate
rpl36 gene − 80038 80151 114 Locate
infA gene − 80245 80478 234 Locate
rps8 gene − 80598 81008 411 Locate
rpl14 gene − 81166 81534 369 Locate
rpl16 gene − 81664 82847 1184 Locate
rps3 gene − 83003 83665 663 Locate
rpl22 gene − 83667 84122 456 Locate
rps19 gene − 84186 84464 279 Locate
rpl2 gene − 84519 86001 1483 Locate
rpl23 gene − 86020 86301 282 Locate
trnI-CAU gene − 86461 86534 74 Locate
ycf2 gene + 86623 93423 6801 Locate
ycf15 gene + 93514 93762 249 Locate
trnL-CAA gene − 94016 94096 81 Locate
ndhB gene − 94639 96850 2212 Locate
rps7 gene − 97125 97592 468 Locate
rps12 gene − 97646 98436 791 Locate
trnV-GAC gene + 99999 100070 72 Locate
rrn16 gene + 100298 101788 1491 Locate
trnI-GAU gene + 102087 103107 1021 Locate
trnA-UGC gene + 103172 104058 887 Locate
rrn23 gene + 104221 107033 2813 Locate
rrn4.5 gene + 107132 107234 103 Locate
rrn5 gene + 107482 107602 121 Locate
trnR-ACG gene + 107827 107900 74 Locate
trnN-GUU gene − 108447 108518 72 Locate
ndhF gene − 109595 111835 2241 Locate
rpl32 gene + 112358 112534 177 Locate
trnL-UAG gene + 112975 113054 80 Locate
ccsA gene + 113100 114125 1026 Locate
ndhD gene − 114364 115887 1524 Locate
psaC gene − 115994 116239 246 Locate
ndhE gene − 116502 116807 306 Locate
ndhG gene − 117028 117558 531 Locate
ndhI gene − 117924 118424 501 Locate
ndhA gene − 118505 120602 2098 Locate
ndhH gene − 120604 121785 1182 Locate
rps15 gene − 121882 122154 273 Locate
ycf1 gene − 122428 127995 5568 Locate
trnN-GUU gene + 128214 128285 72 Locate
trnR-ACG gene − 128832 128905 74 Locate
rrn5 gene − 129130 129250 121 Locate
rrn4.5 gene − 129498 129600 103 Locate
rrn23 gene − 129699 132511 2813 Locate
trnA-UGC gene − 132674 133560 887 Locate
trnI-GAU gene − 133625 134645 1021 Locate
ycf68 gene − 134251 134490 240 Locate
rrn16 gene − 134944 136434 1491 Locate
trnV-GAC gene − 136662 136733 72 Locate
rps12 gene + 138296 139086 791 Locate
rps7 gene + 139140 139607 468 Locate
ndhB gene + 139882 142093 2212 Locate
trnL-CAA gene + 142636 142716 81 Locate
ycf15 gene − 142970 143218 249 Locate
ycf2 gene − 143309 150109 6801 Locate
trnI-CAU gene + 150198 150271 74 Locate
rpl23 gene + 150431 150712 282 Locate
rpl2 gene + 150731 152213 1483 Locate
Status Available
Accession PQ058263.1
Length 152,308 bp
GC content 38.3%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources