Coordinate-aware organelle record

Scutellaria rubropunctata chloroplast genome

Available PQ059337.1 152,080 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	345	1404	1059
trnK-UUU	gene	translation-rna	−	1645	4234	2589
matK	gene	other	−	1940	3476	1536
rps16	gene	ribosomal-protein	−	5115	6288	1173
trnQ-UUG	gene	translation-rna	−	7291	7363	72
psbK	gene	photosystem-ii	+	7687	7873	186
psbI	gene	photosystem-ii	+	8266	8377	111
trnS-GCU	gene	translation-rna	−	8494	8582	88
trnG-UCC	gene	translation-rna	+	9263	10024	761
trnR-UCU	gene	translation-rna	+	10194	10266	72
atpA	gene	atp-synthase	−	10362	11886	1524
atpF	gene	atp-synthase	−	11968	13196	1228
atpH	gene	atp-synthase	−	13551	13797	246
atpI	gene	atp-synthase	−	14792	15536	744
rps2	gene	ribosomal-protein	−	15884	16595	711
rpoC2	gene	rna-polymerase	−	16811	21017	4206
rpoC1	gene	rna-polymerase	−	21171	24002	2831
rpoB	gene	rna-polymerase	−	24028	27241	3213
trnC-GCA	gene	translation-rna	+	28411	28482	71
petN	gene	cytochrome	+	29193	29283	90
psbM	gene	photosystem-ii	−	30280	30385	105
trnD-GUC	gene	translation-rna	−	30911	30985	74
trnY-GUA	gene	translation-rna	−	31098	31182	84
trnE-UUC	gene	translation-rna	−	31241	31314	73
trnT-GGU	gene	translation-rna	+	31889	31961	72
psbD	gene	photosystem-ii	+	33268	34330	1062
psbC	gene	photosystem-ii	+	34277	35699	1422
trnS-UGA	gene	translation-rna	−	35935	36027	92
psbZ	gene	photosystem-ii	+	36346	36535	189
trnG-GCC	gene	translation-rna	+	36797	36868	71
trnfM-CAU	gene	translation-rna	−	37021	37095	74
rps14	gene	ribosomal-protein	−	37244	37547	303
psaB	gene	photosystem-i	−	37674	39879	2205
psaA	gene	photosystem-i	−	39904	42157	2253
ycf3	gene	other	−	42793	44716	1923
trnS-GGA	gene	translation-rna	+	45600	45687	87
rps4	gene	ribosomal-protein	−	45972	46578	606
trnT-UGU	gene	translation-rna	−	46949	47022	73
trnL-UAA	gene	translation-rna	+	47705	48267	562
trnF-GAA	gene	translation-rna	+	48573	48646	73
ndhJ	gene	nad-dehydrogenase	−	49294	49771	477
ndhK	gene	nad-dehydrogenase	−	49878	50556	678
ndhC	gene	nad-dehydrogenase	−	50608	50971	363
trnV-UAC	gene	translation-rna	−	51826	52479	653
trnM-CAU	gene	translation-rna	+	52659	52732	73
atpE	gene	atp-synthase	−	52947	53349	402
atpB	gene	atp-synthase	−	53345	54833	1488
rbcL	gene	other	+	55589	57053	1464
accD	gene	other	+	57786	59253	1467
psaI	gene	photosystem-i	+	59810	59921	111
ycf4	gene	other	+	60354	60909	555
cemA	gene	other	+	61655	62255	600
petA	gene	cytochrome	+	62461	63424	963
psbJ	gene	photosystem-ii	−	64458	64581	123
psbL	gene	photosystem-ii	−	64714	64936	222
psbF	gene	photosystem-ii	−	64854	64974	120
psbE	gene	photosystem-ii	−	64988	65240	252
petL	gene	cytochrome	+	66148	66244	96
petG	gene	cytochrome	+	66419	66533	114
trnW-CCA	gene	translation-rna	−	66651	66725	74
trnP-UGG	gene	translation-rna	−	66894	66968	74
psaJ	gene	photosystem-i	+	67240	67375	135
rpl33	gene	ribosomal-protein	+	67848	68049	201
rps18	gene	ribosomal-protein	+	68223	68529	306
rpl20	gene	ribosomal-protein	−	68766	69153	387
rps12	gene	ribosomal-protein	−	69941	98072	28131
rps12	gene	ribosomal-protein	+	69941	138847	68906
clpP	gene	other	−	70209	72141	1932
psbB	gene	photosystem-ii	+	72607	74134	1527
psbT	gene	photosystem-ii	+	74325	74427	102
psbN	gene	photosystem-ii	−	74500	74632	132
psbH	gene	photosystem-ii	+	74735	74957	222
petB	gene	cytochrome	+	75081	76449	1368
petD	gene	cytochrome	+	76637	77839	1202
rpoA	gene	rna-polymerase	−	78001	79015	1014
rps11	gene	ribosomal-protein	−	79086	79503	417
rpl36	gene	ribosomal-protein	−	79604	79718	114
infA	gene	other	−	79813	80047	234
rps8	gene	ribosomal-protein	−	80166	80577	411
rpl14	gene	ribosomal-protein	−	80748	81117	369
rpl16	gene	ribosomal-protein	−	81243	82477	1234
rps3	gene	ribosomal-protein	−	82631	83294	663
rpl22	gene	ribosomal-protein	−	83295	83751	456
rps19	gene	ribosomal-protein	−	83810	84089	279
rpl2	gene	ribosomal-protein	−	84143	85626	1483
rpl23	gene	ribosomal-protein	−	85644	85926	282
trnI-CAU	gene	translation-rna	−	86085	86159	74
ycf2	gene	other	+	86247	93057	6810
ycf15	gene	other	+	93147	93396	249
trnL-CAA	gene	translation-rna	−	93651	93732	81
ndhB	gene	nad-dehydrogenase	−	94274	96486	2212
rps7	gene	ribosomal-protein	−	96760	97228	468
trnV-GAC	gene	translation-rna	+	99649	99721	72
rrn16	gene	ribosomal-rna	+	99948	101439	1491
trnI-GAU	gene	translation-rna	+	101737	102758	1021
trnA-UGC	gene	translation-rna	+	102822	103705	883
rrn23	gene	ribosomal-rna	+	103874	106687	2813
rrn4.5	gene	ribosomal-rna	+	106785	106888	103
rrn5	gene	ribosomal-rna	+	107135	107256	121
trnR-ACG	gene	translation-rna	+	107490	107564	74
trnN-GUU	gene	translation-rna	−	108110	108182	72
ndhF	gene	nad-dehydrogenase	−	109258	111499	2241
rpl32	gene	ribosomal-protein	+	112020	112197	177
trnL-UAG	gene	translation-rna	+	112642	112722	80
ccsA	gene	other	+	112817	113792	975
ndhD	gene	nad-dehydrogenase	−	114024	115527	1503
psaC	gene	photosystem-i	−	115646	115892	246
ndhE	gene	nad-dehydrogenase	−	116148	116454	306
ndhG	gene	nad-dehydrogenase	−	116684	117215	531
ndhI	gene	nad-dehydrogenase	−	117579	118080	501
ndhA	gene	nad-dehydrogenase	−	118160	120252	2092
ndhH	gene	nad-dehydrogenase	−	120253	121435	1182
rps15	gene	ribosomal-protein	−	121537	121810	273
ycf1	gene	other	−	122076	127728	5652
trnN-GUU	gene	translation-rna	+	127946	128018	72
trnR-ACG	gene	translation-rna	−	128564	128638	74
rrn5	gene	ribosomal-rna	−	128872	128993	121
rrn4.5	gene	ribosomal-rna	−	129240	129343	103
rrn23	gene	ribosomal-rna	−	129441	132254	2813
trnA-UGC	gene	translation-rna	−	132423	133306	883
trnI-GAU	gene	translation-rna	−	133370	134391	1021
ycf68	gene	other	−	133996	134236	240
rrn16	gene	ribosomal-rna	−	134689	136180	1491
trnV-GAC	gene	translation-rna	−	136407	136479	72
rps7	gene	ribosomal-protein	+	138900	139368	468
ndhB	gene	nad-dehydrogenase	+	139642	141854	2212
trnL-CAA	gene	translation-rna	+	142396	142477	81
ycf15	gene	other	−	142732	142981	249
ycf2	gene	other	−	143071	149881	6810
trnI-CAU	gene	translation-rna	+	149969	150043	74
rpl23	gene	ribosomal-protein	+	150202	150484	282
rpl2	gene	ribosomal-protein	+	150502	151985	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059337.1DNA · accDPQ059337DNA · atpBPQ059337DNA · matKPQ059337DNA · ndhFPQ059337DNA · psbAPQ059337DNA · rbcLPQ059337DNA · rps12PQ059337DNA · ycf1PQ059337