Coordinate-aware organelle record

Scutellaria scandens chloroplast genome

Available PQ059338.1 152,624 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	369	1428	1059
trnK-UUU	gene	translation-rna	−	1660	4248	2588
matK	gene	other	−	1955	3491	1536
rps16	gene	ribosomal-protein	−	5158	6327	1169
trnQ-UUG	gene	translation-rna	−	7446	7518	72
psbK	gene	photosystem-ii	+	7847	8033	186
psbI	gene	photosystem-ii	+	8400	8511	111
trnS-GCU	gene	translation-rna	−	8627	8715	88
trnG-UCC	gene	translation-rna	+	9404	10166	762
trnR-UCU	gene	translation-rna	+	10340	10412	72
atpA	gene	atp-synthase	−	10508	12032	1524
atpF	gene	atp-synthase	−	12105	13333	1228
atpH	gene	atp-synthase	−	13750	13996	246
atpI	gene	atp-synthase	−	14986	15730	744
rps2	gene	ribosomal-protein	−	16078	16915	837
rpoC2	gene	rna-polymerase	−	17005	21211	4206
rpoC1	gene	rna-polymerase	−	21363	24200	2837
rpoB	gene	rna-polymerase	−	24226	27439	3213
trnC-GCA	gene	translation-rna	+	28607	28678	71
petN	gene	cytochrome	+	29380	29470	90
psbM	gene	photosystem-ii	−	30552	30666	114
trnD-GUC	gene	translation-rna	−	31192	31266	74
trnY-GUA	gene	translation-rna	−	31379	31463	84
trnE-UUC	gene	translation-rna	−	31522	31595	73
trnT-GGU	gene	translation-rna	+	32177	32249	72
psbD	gene	photosystem-ii	+	33554	34616	1062
psbC	gene	photosystem-ii	+	34563	35985	1422
trnS-UGA	gene	translation-rna	−	36228	36320	92
psbZ	gene	photosystem-ii	+	36639	36828	189
trnG-GCC	gene	translation-rna	+	37099	37170	71
trnfM-CAU	gene	translation-rna	−	37322	37396	74
rps14	gene	ribosomal-protein	−	37545	37848	303
psaB	gene	photosystem-i	−	37975	40180	2205
psaA	gene	photosystem-i	−	40205	42458	2253
ycf3	gene	other	−	43161	45061	1900
trnS-GGA	gene	translation-rna	+	45946	46033	87
rps4	gene	ribosomal-protein	−	46325	46931	606
trnT-UGU	gene	translation-rna	−	47273	47346	73
trnL-UAA	gene	translation-rna	+	48029	48598	569
trnF-GAA	gene	translation-rna	+	48903	48976	73
ndhJ	gene	nad-dehydrogenase	−	49628	50105	477
ndhK	gene	nad-dehydrogenase	−	50212	50890	678
ndhC	gene	nad-dehydrogenase	−	50942	51305	363
trnV-UAC	gene	translation-rna	−	52295	52948	653
trnM-CAU	gene	translation-rna	+	53128	53201	73
atpE	gene	atp-synthase	−	53410	53812	402
atpB	gene	atp-synthase	−	53808	55296	1488
rbcL	gene	other	+	56046	57510	1464
accD	gene	other	+	58231	59698	1467
psaI	gene	photosystem-i	+	60414	60525	111
ycf4	gene	other	+	60958	61513	555
cemA	gene	other	+	62254	62854	600
petA	gene	cytochrome	+	63067	64030	963
psbJ	gene	photosystem-ii	−	65040	65163	123
psbL	gene	photosystem-ii	−	65296	65518	222
psbF	gene	photosystem-ii	−	65436	65556	120
psbE	gene	photosystem-ii	−	65570	65822	252
petL	gene	cytochrome	+	66732	66828	96
petG	gene	cytochrome	+	67003	67117	114
trnW-CCA	gene	translation-rna	−	67235	67309	74
trnP-UGG	gene	translation-rna	−	67470	67544	74
psaJ	gene	photosystem-i	+	67800	67935	135
rpl33	gene	ribosomal-protein	+	68407	68608	201
rps18	gene	ribosomal-protein	+	68782	69088	306
rpl20	gene	ribosomal-protein	−	69326	69713	387
rps12	gene	ribosomal-protein	−	70501	98664	28163
rps12	gene	ribosomal-protein	+	70501	139391	68890
clpP	gene	other	−	70769	72710	1941
psbB	gene	photosystem-ii	+	73183	74710	1527
psbT	gene	photosystem-ii	+	74901	75003	102
psbN	gene	photosystem-ii	−	75076	75208	132
psbH	gene	photosystem-ii	+	75311	75533	222
petB	gene	cytochrome	+	75657	77028	1371
petD	gene	cytochrome	+	77216	78418	1202
rpoA	gene	rna-polymerase	−	78575	79595	1020
rps11	gene	ribosomal-protein	−	79666	80083	417
rpl36	gene	ribosomal-protein	−	80184	80298	114
infA	gene	other	−	80393	80627	234
rps8	gene	ribosomal-protein	−	80746	81157	411
rpl14	gene	ribosomal-protein	−	81330	81699	369
rpl16	gene	ribosomal-protein	−	81825	83069	1244
rps3	gene	ribosomal-protein	−	83223	83886	663
rpl22	gene	ribosomal-protein	−	83887	84343	456
rps19	gene	ribosomal-protein	−	84402	84681	279
rpl2	gene	ribosomal-protein	−	84735	86218	1483
rpl23	gene	ribosomal-protein	−	86236	86518	282
trnI-CAU	gene	translation-rna	−	86677	86751	74
ycf2	gene	other	+	86839	93649	6810
ycf15	gene	other	+	93739	93988	249
trnL-CAA	gene	translation-rna	−	94243	94324	81
ndhB	gene	nad-dehydrogenase	−	94866	97024	2158
rps7	gene	ribosomal-protein	−	97352	97820	468
trnV-GAC	gene	translation-rna	+	100241	100313	72
rrn16	gene	ribosomal-rna	+	100540	102031	1491
trnI-GAU	gene	translation-rna	+	102329	103350	1021
trnA-UGC	gene	translation-rna	+	103414	104302	888
rrn23	gene	ribosomal-rna	+	104471	107284	2813
rrn4.5	gene	ribosomal-rna	+	107382	107485	103
rrn5	gene	ribosomal-rna	+	107732	107853	121
trnR-ACG	gene	translation-rna	+	108076	108150	74
trnN-GUU	gene	translation-rna	−	108696	108768	72
ndhF	gene	nad-dehydrogenase	−	109844	112085	2241
rpl32	gene	ribosomal-protein	+	112607	112784	177
trnL-UAG	gene	translation-rna	+	113196	113276	80
ccsA	gene	other	+	113374	114349	975
ndhD	gene	nad-dehydrogenase	−	114583	116107	1524
psaC	gene	photosystem-i	−	116205	116451	246
ndhE	gene	nad-dehydrogenase	−	116707	117013	306
ndhG	gene	nad-dehydrogenase	−	117233	117764	531
ndhI	gene	nad-dehydrogenase	−	118121	118622	501
ndhA	gene	nad-dehydrogenase	−	118703	120805	2102
ndhH	gene	nad-dehydrogenase	−	120806	121988	1182
rps15	gene	ribosomal-protein	−	122090	122363	273
ycf1	gene	other	−	122623	128278	5655
trnN-GUU	gene	translation-rna	+	128496	128568	72
trnR-ACG	gene	translation-rna	−	129114	129188	74
rrn5	gene	ribosomal-rna	−	129411	129532	121
rrn4.5	gene	ribosomal-rna	−	129779	129882	103
rrn23	gene	ribosomal-rna	−	129980	132793	2813
trnA-UGC	gene	translation-rna	−	132962	133850	888
trnI-GAU	gene	translation-rna	−	133914	134935	1021
ycf68	gene	other	−	134540	134780	240
rrn16	gene	ribosomal-rna	−	135233	136724	1491
trnV-GAC	gene	translation-rna	−	136951	137023	72
rps7	gene	ribosomal-protein	+	139444	139912	468
ndhB	gene	nad-dehydrogenase	+	140240	142398	2158
trnL-CAA	gene	translation-rna	+	142940	143021	81
ycf15	gene	other	−	143276	143525	249
ycf2	gene	other	−	143615	150425	6810
trnI-CAU	gene	translation-rna	+	150513	150587	74
rpl23	gene	ribosomal-protein	+	150746	151028	282
rpl2	gene	ribosomal-protein	+	151046	152529	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059338.1DNA · accDPQ059338DNA · atpBPQ059338DNA · matKPQ059338DNA · ndhFPQ059338DNA · psbAPQ059338DNA · rbcLPQ059338DNA · rps12PQ059338DNA · ycf1PQ059338