Coordinate-aware organelle record

Scutellaria scordiifolia var. ammophila chloroplast genome

Available PQ059339.1 152,574 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	379	1438	1059
trnK-UUU	gene	translation-rna	−	1670	4258	2588
matK	gene	other	−	1965	3501	1536
rps16	gene	ribosomal-protein	−	5161	6330	1169
trnQ-UUG	gene	translation-rna	−	7460	7532	72
psbK	gene	photosystem-ii	+	7856	8042	186
psbI	gene	photosystem-ii	+	8432	8543	111
trnS-GCU	gene	translation-rna	−	8662	8750	88
trnG-UCC	gene	translation-rna	+	9437	10197	760
trnR-UCU	gene	translation-rna	+	10386	10458	72
atpA	gene	atp-synthase	−	10554	12078	1524
atpF	gene	atp-synthase	−	12151	13379	1228
atpH	gene	atp-synthase	−	13745	13991	246
atpI	gene	atp-synthase	−	14987	15731	744
rps2	gene	ribosomal-protein	−	16079	16790	711
rpoC2	gene	rna-polymerase	−	17005	21211	4206
rpoC1	gene	rna-polymerase	−	21365	24202	2837
rpoB	gene	rna-polymerase	−	24228	27441	3213
trnC-GCA	gene	translation-rna	+	28604	28675	71
petN	gene	cytochrome	+	29385	29475	90
psbM	gene	photosystem-ii	−	30502	30607	105
trnD-GUC	gene	translation-rna	−	31132	31206	74
trnY-GUA	gene	translation-rna	−	31319	31403	84
trnE-UUC	gene	translation-rna	−	31462	31535	73
trnT-GGU	gene	translation-rna	+	32117	32189	72
psbD	gene	photosystem-ii	+	33485	34547	1062
psbC	gene	photosystem-ii	+	34494	35916	1422
trnS-UGA	gene	translation-rna	−	36159	36251	92
psbZ	gene	photosystem-ii	+	36570	36759	189
trnG-GCC	gene	translation-rna	+	37030	37101	71
trnfM-CAU	gene	translation-rna	−	37246	37320	74
rps14	gene	ribosomal-protein	−	37469	37772	303
psaB	gene	photosystem-i	−	37899	40104	2205
psaA	gene	photosystem-i	−	40129	42382	2253
ycf3	gene	other	−	43058	44981	1923
trnS-GGA	gene	translation-rna	+	45875	45962	87
rps4	gene	ribosomal-protein	−	46247	46853	606
trnT-UGU	gene	translation-rna	−	47191	47264	73
trnL-UAA	gene	translation-rna	+	47949	48518	569
trnF-GAA	gene	translation-rna	+	48824	48897	73
ndhJ	gene	nad-dehydrogenase	−	49545	50022	477
ndhK	gene	nad-dehydrogenase	−	50129	50807	678
ndhC	gene	nad-dehydrogenase	−	50859	51222	363
trnV-UAC	gene	translation-rna	−	52218	52871	653
trnM-CAU	gene	translation-rna	+	53051	53124	73
atpE	gene	atp-synthase	−	53333	53735	402
atpB	gene	atp-synthase	−	53731	55219	1488
rbcL	gene	other	+	55970	57434	1464
accD	gene	other	+	58144	59611	1467
psaI	gene	photosystem-i	+	60341	60452	111
ycf4	gene	other	+	60885	61440	555
cemA	gene	other	+	62188	62788	600
petA	gene	cytochrome	+	62994	63957	963
psbJ	gene	photosystem-ii	−	64974	65097	123
psbL	gene	photosystem-ii	−	65230	65347	117
psbF	gene	photosystem-ii	−	65370	65490	120
psbE	gene	photosystem-ii	−	65504	65756	252
petL	gene	cytochrome	+	66663	66759	96
petG	gene	cytochrome	+	66933	67047	114
trnW-CCA	gene	translation-rna	−	67165	67239	74
trnP-UGG	gene	translation-rna	−	67408	67482	74
psaJ	gene	photosystem-i	+	67753	67888	135
rpl33	gene	ribosomal-protein	+	68359	68560	201
rps18	gene	ribosomal-protein	+	68734	69040	306
rpl20	gene	ribosomal-protein	−	69277	69664	387
rps12	gene	ribosomal-protein	−	70451	98570	28119
rps12	gene	ribosomal-protein	+	70451	139341	68890
clpP	gene	other	−	70719	72654	1935
psbB	gene	photosystem-ii	+	73128	74655	1527
psbT	gene	photosystem-ii	+	74846	74948	102
psbN	gene	photosystem-ii	−	75021	75153	132
psbH	gene	photosystem-ii	+	75256	75478	222
petB	gene	cytochrome	+	75602	76968	1366
petD	gene	cytochrome	+	77156	78358	1202
rpoA	gene	rna-polymerase	−	78520	79534	1014
rps11	gene	ribosomal-protein	−	79605	80022	417
rpl36	gene	ribosomal-protein	−	80123	80237	114
infA	gene	other	−	80332	80566	234
rps8	gene	ribosomal-protein	−	80685	81096	411
rpl14	gene	ribosomal-protein	−	81254	81623	369
rpl16	gene	ribosomal-protein	−	81749	82975	1226
rps3	gene	ribosomal-protein	−	83129	83792	663
rpl22	gene	ribosomal-protein	−	83793	84249	456
rps19	gene	ribosomal-protein	−	84308	84587	279
rpl2	gene	ribosomal-protein	−	84641	86124	1483
rpl23	gene	ribosomal-protein	−	86142	86424	282
trnI-CAU	gene	translation-rna	−	86583	86657	74
ycf2	gene	other	+	86745	93555	6810
ycf15	gene	other	+	93645	93894	249
trnL-CAA	gene	translation-rna	−	94149	94230	81
ndhB	gene	nad-dehydrogenase	−	94772	96930	2158
rps7	gene	ribosomal-protein	−	97258	97726	468
trnV-GAC	gene	translation-rna	+	100147	100219	72
rrn16	gene	ribosomal-rna	+	100446	101937	1491
trnI-GAU	gene	translation-rna	+	102235	103256	1021
trnA-UGC	gene	translation-rna	+	103320	104205	885
rrn23	gene	ribosomal-rna	+	104374	107187	2813
rrn4.5	gene	ribosomal-rna	+	107285	107388	103
rrn5	gene	ribosomal-rna	+	107635	107756	121
trnR-ACG	gene	translation-rna	+	107990	108064	74
trnN-GUU	gene	translation-rna	−	108610	108682	72
ndhF	gene	nad-dehydrogenase	−	109751	111992	2241
rpl32	gene	ribosomal-protein	+	112508	112685	177
trnL-UAG	gene	translation-rna	+	113131	113211	80
ccsA	gene	other	+	113307	114282	975
ndhD	gene	nad-dehydrogenase	−	114514	116038	1524
psaC	gene	photosystem-i	−	116136	116382	246
ndhE	gene	nad-dehydrogenase	−	116643	116949	306
ndhG	gene	nad-dehydrogenase	−	117169	117700	531
ndhI	gene	nad-dehydrogenase	−	118063	118564	501
ndhA	gene	nad-dehydrogenase	−	118644	120744	2100
ndhH	gene	nad-dehydrogenase	−	120745	121927	1182
rps15	gene	ribosomal-protein	−	122029	122362	333
ycf1	gene	other	−	122572	128326	5754
trnN-GUU	gene	translation-rna	+	128438	128510	72
trnR-ACG	gene	translation-rna	−	129056	129130	74
rrn5	gene	ribosomal-rna	−	129364	129485	121
rrn4.5	gene	ribosomal-rna	−	129732	129835	103
rrn23	gene	ribosomal-rna	−	129933	132746	2813
trnA-UGC	gene	translation-rna	−	132915	133800	885
trnI-GAU	gene	translation-rna	−	133864	134885	1021
ycf68	gene	other	−	134490	134730	240
rrn16	gene	ribosomal-rna	−	135183	136674	1491
trnV-GAC	gene	translation-rna	−	136901	136973	72
rps7	gene	ribosomal-protein	+	139394	139862	468
ndhB	gene	nad-dehydrogenase	+	140190	142348	2158
trnL-CAA	gene	translation-rna	+	142890	142971	81
ycf15	gene	other	−	143226	143475	249
ycf2	gene	other	−	143565	150375	6810
trnI-CAU	gene	translation-rna	+	150463	150537	74
rpl23	gene	ribosomal-protein	+	150696	150978	282
rpl2	gene	ribosomal-protein	+	150996	152479	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059339.1DNA · accDPQ059339DNA · atpBPQ059339DNA · matKPQ059339DNA · ndhFPQ059339DNA · psbAPQ059339DNA · rbcLPQ059339DNA · rps12PQ059339DNA · ycf1PQ059339