Coordinate-aware organelle record

Scutellaria scordiifolia var. puberula chloroplast genome

Available PQ059189.1 152,566 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	379	1438	1059
trnK-UUU	gene	translation-rna	−	1670	4258	2588
matK	gene	other	−	1965	3501	1536
rps16	gene	ribosomal-protein	−	5161	6330	1169
trnQ-UUG	gene	translation-rna	−	7460	7532	72
psbK	gene	photosystem-ii	+	7856	8042	186
psbI	gene	photosystem-ii	+	8432	8543	111
trnS-GCU	gene	translation-rna	−	8660	8748	88
trnG-UCC	gene	translation-rna	+	9435	10195	760
trnR-UCU	gene	translation-rna	+	10369	10441	72
atpA	gene	atp-synthase	−	10537	12061	1524
atpF	gene	atp-synthase	−	12134	13362	1228
atpH	gene	atp-synthase	−	13730	13976	246
atpI	gene	atp-synthase	−	14966	15710	744
rps2	gene	ribosomal-protein	−	16058	16769	711
rpoC2	gene	rna-polymerase	−	16985	21191	4206
rpoC1	gene	rna-polymerase	−	21345	24182	2837
rpoB	gene	rna-polymerase	−	24208	27421	3213
trnC-GCA	gene	translation-rna	+	28584	28655	71
petN	gene	cytochrome	+	29365	29455	90
psbM	gene	photosystem-ii	−	30482	30587	105
trnD-GUC	gene	translation-rna	−	31112	31186	74
trnY-GUA	gene	translation-rna	−	31299	31383	84
trnE-UUC	gene	translation-rna	−	31442	31515	73
trnT-GGU	gene	translation-rna	+	32097	32169	72
psbD	gene	photosystem-ii	+	33470	34532	1062
psbC	gene	photosystem-ii	+	34479	35901	1422
trnS-UGA	gene	translation-rna	−	36144	36236	92
psbZ	gene	photosystem-ii	+	36555	36744	189
trnG-GCC	gene	translation-rna	+	37015	37086	71
trnfM-CAU	gene	translation-rna	−	37232	37306	74
rps14	gene	ribosomal-protein	−	37455	37758	303
psaB	gene	photosystem-i	−	37885	40090	2205
psaA	gene	photosystem-i	−	40115	42368	2253
ycf3	gene	other	−	43044	44968	1924
trnS-GGA	gene	translation-rna	+	45854	45941	87
rps4	gene	ribosomal-protein	−	46226	46832	606
trnT-UGU	gene	translation-rna	−	47170	47243	73
trnL-UAA	gene	translation-rna	+	47928	48497	569
trnF-GAA	gene	translation-rna	+	48803	48876	73
ndhJ	gene	nad-dehydrogenase	−	49524	50001	477
ndhK	gene	nad-dehydrogenase	−	50108	50786	678
ndhC	gene	nad-dehydrogenase	−	50838	51201	363
trnV-UAC	gene	translation-rna	−	52197	52850	653
trnM-CAU	gene	translation-rna	+	53030	53103	73
atpE	gene	atp-synthase	−	53312	53714	402
atpB	gene	atp-synthase	−	53710	55198	1488
rbcL	gene	other	+	55949	57413	1464
accD	gene	other	+	58123	59590	1467
psaI	gene	photosystem-i	+	60320	60431	111
ycf4	gene	other	+	60864	61419	555
cemA	gene	other	+	62167	62767	600
petA	gene	cytochrome	+	62973	63936	963
psbJ	gene	photosystem-ii	−	64954	65077	123
psbL	gene	photosystem-ii	−	65210	65327	117
psbF	gene	photosystem-ii	−	65350	65470	120
psbE	gene	photosystem-ii	−	65484	65736	252
petL	gene	cytochrome	+	66644	66740	96
petG	gene	cytochrome	+	66914	67028	114
trnW-CCA	gene	translation-rna	−	67146	67220	74
trnP-UGG	gene	translation-rna	−	67389	67463	74
psaJ	gene	photosystem-i	+	67734	67869	135
rpl33	gene	ribosomal-protein	+	68340	68541	201
rps18	gene	ribosomal-protein	+	68715	69021	306
rpl20	gene	ribosomal-protein	−	69258	69645	387
rps12	gene	ribosomal-protein	−	70433	98570	28137
rps12	gene	ribosomal-protein	+	70433	139333	68900
clpP	gene	other	−	70701	72636	1935
psbB	gene	photosystem-ii	+	73110	74637	1527
psbT	gene	photosystem-ii	+	74828	74930	102
psbN	gene	photosystem-ii	−	75003	75135	132
psbH	gene	photosystem-ii	+	75238	75460	222
petB	gene	cytochrome	+	75584	76950	1366
petD	gene	cytochrome	+	77138	78340	1202
rpoA	gene	rna-polymerase	−	78502	79516	1014
rps11	gene	ribosomal-protein	−	79587	80004	417
rpl36	gene	ribosomal-protein	−	80105	80219	114
infA	gene	other	−	80314	80548	234
rps8	gene	ribosomal-protein	−	80667	81078	411
rpl14	gene	ribosomal-protein	−	81236	81605	369
rpl16	gene	ribosomal-protein	−	81731	82975	1244
rps3	gene	ribosomal-protein	−	83129	83792	663
rpl22	gene	ribosomal-protein	−	83793	84249	456
rps19	gene	ribosomal-protein	−	84308	84587	279
rpl2	gene	ribosomal-protein	−	84641	86124	1483
rpl23	gene	ribosomal-protein	−	86142	86424	282
trnI-CAU	gene	translation-rna	−	86583	86657	74
ycf2	gene	other	+	86745	93555	6810
ycf15	gene	other	+	93696	93894	198
trnL-CAA	gene	translation-rna	−	94149	94230	81
ndhB	gene	nad-dehydrogenase	−	94772	96930	2158
rps7	gene	ribosomal-protein	−	97258	97726	468
trnV-GAC	gene	translation-rna	+	100147	100219	72
rrn16	gene	ribosomal-rna	+	100446	101937	1491
trnI-GAU	gene	translation-rna	+	102235	103256	1021
trnA-UGC	gene	translation-rna	+	103320	104205	885
rrn23	gene	ribosomal-rna	+	104374	107187	2813
rrn4.5	gene	ribosomal-rna	+	107285	107388	103
rrn5	gene	ribosomal-rna	+	107635	107756	121
trnR-ACG	gene	translation-rna	+	107990	108064	74
trnN-GUU	gene	translation-rna	−	108610	108682	72
ndhF	gene	nad-dehydrogenase	−	109751	111992	2241
rpl32	gene	ribosomal-protein	+	112508	112685	177
trnL-UAG	gene	translation-rna	+	113131	113211	80
ccsA	gene	other	+	113307	114282	975
ndhD	gene	nad-dehydrogenase	−	114514	116038	1524
psaC	gene	photosystem-i	−	116136	116382	246
ndhE	gene	nad-dehydrogenase	−	116643	116949	306
ndhG	gene	nad-dehydrogenase	−	117169	117700	531
ndhI	gene	nad-dehydrogenase	−	118063	118564	501
ndhA	gene	nad-dehydrogenase	−	118644	120736	2092
ndhH	gene	nad-dehydrogenase	−	120737	121949	1212
rps15	gene	ribosomal-protein	−	122021	122354	333
ycf1	gene	other	−	122564	128318	5754
trnN-GUU	gene	translation-rna	+	128430	128502	72
trnR-ACG	gene	translation-rna	−	129048	129122	74
rrn5	gene	ribosomal-rna	−	129356	129477	121
rrn4.5	gene	ribosomal-rna	−	129724	129827	103
rrn23	gene	ribosomal-rna	−	129925	132738	2813
trnA-UGC	gene	translation-rna	−	132907	133792	885
trnI-GAU	gene	translation-rna	−	133856	134877	1021
ycf68	gene	other	−	134482	134722	240
rrn16	gene	ribosomal-rna	−	135175	136666	1491
trnV-GAC	gene	translation-rna	−	136893	136965	72
rps7	gene	ribosomal-protein	+	139386	139854	468
ndhB	gene	nad-dehydrogenase	+	140182	142340	2158
trnL-CAA	gene	translation-rna	+	142882	142963	81
ycf15	gene	other	−	143218	143416	198
ycf2	gene	other	−	143557	150367	6810
trnI-CAU	gene	translation-rna	+	150455	150529	74
rpl23	gene	ribosomal-protein	+	150688	150970	282
rpl2	gene	ribosomal-protein	+	150988	152471	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059189.1DNA · accDPQ059189DNA · atpBPQ059189DNA · matKPQ059189DNA · ndhFPQ059189DNA · psbAPQ059189DNA · rbcLPQ059189DNA · rps12PQ059189DNA · ycf1PQ059189