Coordinate-aware organelle record

Scutellaria scutellarioides chloroplast genome

Available MW420961.1 151,544 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	0	74	74
psbA	gene	photosystem-ii	−	267	1326	1059
trnK-UUU	gene	translation-rna	−	1562	4144	2582
matK	gene	other	−	1853	3392	1539
rps16	gene	ribosomal-protein	−	5035	6209	1174
trnQ-UUC	gene	translation-rna	−	7203	7275	72
psbK	gene	photosystem-ii	+	7600	7786	186
psbI	gene	photosystem-ii	+	8179	8290	111
trnS-GCU	gene	translation-rna	−	8409	8497	88
trnG-CGA	gene	translation-rna	+	9211	9958	747
trnR-UCU	gene	translation-rna	+	10132	10204	72
atpA	gene	atp-synthase	−	10300	11824	1524
atpF	gene	atp-synthase	−	11915	13144	1229
atpH	gene	atp-synthase	−	13508	13754	246
atpI	gene	atp-synthase	−	14739	15483	744
rps2	gene	ribosomal-protein	−	15831	16542	711
rpoC2	gene	rna-polymerase	−	16758	20964	4206
rpoC1	gene	rna-polymerase	−	21118	23944	2826
rpoB	gene	rna-polymerase	−	23970	27183	3213
trnC-GCA	gene	translation-rna	+	28336	28407	71
petN	gene	cytochrome	+	29114	29204	90
psbM	gene	photosystem-ii	−	30199	30304	105
trnD-GUC	gene	translation-rna	−	30830	30904	74
trnY-GUA	gene	translation-rna	−	31017	31101	84
trnE-UUC	gene	translation-rna	−	31160	31233	73
trnT-GGU	gene	translation-rna	+	31808	31880	72
psbD	gene	photosystem-ii	+	33190	34252	1062
psbC	gene	photosystem-ii	+	34199	35621	1422
trnS-UCA	gene	translation-rna	−	35855	35948	93
psbZ	gene	photosystem-ii	+	36267	36456	189
trnG-GCC	gene	translation-rna	+	36714	36785	71
trnfM-CAU	gene	translation-rna	−	36938	37012	74
rps14	gene	ribosomal-protein	−	37161	37464	303
psaB	gene	photosystem-i	−	37591	39796	2205
psaA	gene	photosystem-i	−	39821	42074	2253
ycf3	gene	other	−	42742	44678	1936
trnS-GGA	gene	translation-rna	+	45254	45341	87
rps4	gene	ribosomal-protein	−	45623	46229	606
trnT-UGU	gene	translation-rna	−	46562	46635	73
trnL-UAA	gene	translation-rna	+	47317	47887	570
trnF-GAA	gene	translation-rna	+	48191	48264	73
ndhJ	gene	nad-dehydrogenase	−	48917	49394	477
ndhK	gene	nad-dehydrogenase	−	49501	50179	678
ndhC	gene	nad-dehydrogenase	−	50231	50594	363
trnV-UAC	gene	translation-rna	−	51047	51702	655
trnM-CAU	gene	translation-rna	+	51882	51955	73
atpE	gene	atp-synthase	−	52163	52565	402
atpB	gene	atp-synthase	−	52561	54058	1497
rbcL	gene	other	+	54824	56270	1446
accD	gene	other	+	56991	58470	1479
psaI	gene	photosystem-i	+	59180	59291	111
ycf4	gene	other	+	59724	60279	555
cemA	gene	other	+	60961	61621	660
petA	gene	cytochrome	+	61827	62790	963
pabJ	gene	other	−	63818	63941	123
psbL	gene	photosystem-ii	−	64074	64191	117
psbF	gene	photosystem-ii	−	64214	64334	120
psbE	gene	photosystem-ii	−	64348	64600	252
petL	gene	cytochrome	+	65504	65600	96
petG	gene	cytochrome	+	65775	65889	114
trnW-CCA	gene	translation-rna	−	66007	66081	74
trnP-UGG	gene	translation-rna	−	66240	66314	74
psbJ	gene	photosystem-ii	+	66586	66721	135
rpl33	gene	ribosomal-protein	+	67200	67401	201
rps18	gene	ribosomal-protein	+	67575	67881	306
rpl20	gene	ribosomal-protein	−	68108	68495	387
rps12	gene	ribosomal-protein	−	69288	97610	28322
rps12	gene	ribosomal-protein	+	69288	138304	69016
clpP	gene	other	−	69555	71490	1935
psbB	gene	photosystem-ii	+	71958	73485	1527
psbT	gene	photosystem-ii	+	73676	73784	108
psbN	gene	photosystem-ii	−	73844	73976	132
psbH	gene	photosystem-ii	+	74079	74301	222
petB	gene	cytochrome	+	74426	75793	1367
petD	gene	cytochrome	+	75981	77174	1193
rpoA	gene	rna-polymerase	−	77336	78350	1014
rps11	gene	ribosomal-protein	−	78421	78838	417
rpl36	gene	ribosomal-protein	−	79052	79166	114
infA	gene	other	−	79261	79495	234
rps8	gene	ribosomal-protein	−	79614	80025	411
rpl14	gene	ribosomal-protein	−	80191	80560	369
rpl16	gene	ribosomal-protein	−	80682	81931	1249
rps3	gene	ribosomal-protein	−	82078	82741	663
rpl22	gene	ribosomal-protein	−	82742	83198	456
rps19	gene	ribosomal-protein	−	83257	83536	279
rpl2	gene	ribosomal-protein	−	83591	85074	1483
rpl23	gene	ribosomal-protein	−	85092	85374	282
trnI-CAU	gene	translation-rna	−	85533	85607	74
ycf2	gene	other	+	85695	92505	6810
ycf15	gene	other	+	92646	92844	198
trnL-CAA	gene	translation-rna	−	93104	93185	81
ndhB	gene	nad-dehydrogenase	−	93727	95939	2212
rps7	gene	ribosomal-protein	−	96213	96681	468
trnV-GAC	gene	translation-rna	+	99169	99241	72
rrn16	gene	ribosomal-rna	+	99468	100959	1491
trnI-GAU	gene	translation-rna	+	101249	102268	1019
trnA-UGC	gene	translation-rna	+	102333	103218	885
rrn23	gene	ribosomal-rna	+	103387	106198	2811
rrn4.5	gene	ribosomal-rna	+	106296	106399	103
rrn5	gene	ribosomal-rna	+	106646	106767	121
trnR-ACG	gene	translation-rna	+	107001	107075	74
trnN-GUU	gene	translation-rna	+	107631	107703	72
ndhF	gene	nad-dehydrogenase	−	108785	111026	2241
rpl32	gene	ribosomal-protein	+	111546	111723	177
trnL-UAG	gene	translation-rna	+	112161	112241	80
ccsA	gene	other	+	112335	113310	975
ndhD	gene	nad-dehydrogenase	−	113544	115074	1530
psaC	gene	photosystem-i	−	115173	115419	246
ndhE	gene	nad-dehydrogenase	−	115674	115980	306
ndhG	gene	nad-dehydrogenase	−	116190	116721	531
ndhI	gene	nad-dehydrogenase	−	117077	117578	501
ndhA	gene	nad-dehydrogenase	−	117658	119747	2089
ndhH	gene	nad-dehydrogenase	−	119748	120930	1182
rps15	gene	ribosomal-protein	−	121026	121299	273
ycf1	gene	other	−	121573	127006	5433
trnN-GUU	gene	translation-rna	+	127335	127407	72
trnR-ACG	gene	translation-rna	−	127963	128037	74
rrn5	gene	ribosomal-rna	−	128271	128392	121
rrn4.5	gene	ribosomal-rna	−	128639	128742	103
rrn23	gene	ribosomal-rna	−	128840	131651	2811
trnA-UGC	gene	translation-rna	−	131820	132705	885
trnI-GAU	gene	translation-rna	−	132770	133789	1019
rrn16	gene	ribosomal-rna	−	134079	135570	1491
trnV-GAC	gene	translation-rna	−	135797	135869	72
rps7	gene	ribosomal-protein	+	138357	138825	468
ndhB	gene	nad-dehydrogenase	+	139099	141311	2212
trnL-CAA	gene	translation-rna	+	141853	141934	81
ycf15	gene	other	−	142194	142392	198
ycf2	gene	other	−	142533	149343	6810
trnI-CAU	gene	translation-rna	+	149431	149505	74
rpl23	gene	ribosomal-protein	+	149664	149946	282
rpl2	gene	ribosomal-protein	+	149964	151447	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW420961.1DNA · accDMW420961DNA · atpBMW420961DNA · matKMW420961DNA · ndhFMW420961DNA · psbAMW420961DNA · rbcLMW420961DNA · rps12MW420961DNA · ycf1MW420961