Coordinate-aware organelle record

Scutellaria serrata chloroplast genome

Available PQ059340.1 151,523 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	75	74
psbA	gene	photosystem-ii	−	379	1438	1059
trnK-UUU	gene	translation-rna	−	1680	4275	2595
matK	gene	other	−	1981	3517	1536
rps16	gene	ribosomal-protein	−	5176	6346	1170
trnQ-UUG	gene	translation-rna	−	7273	7345	72
psbK	gene	photosystem-ii	+	7677	7863	186
psbI	gene	photosystem-ii	+	8246	8357	111
trnS-GCU	gene	translation-rna	−	8468	8556	88
trnG-UCC	gene	translation-rna	+	9230	9992	762
trnR-UCU	gene	translation-rna	+	10166	10238	72
atpA	gene	atp-synthase	−	10340	11864	1524
atpF	gene	atp-synthase	−	11936	13170	1234
atpH	gene	atp-synthase	−	13533	13779	246
atpI	gene	atp-synthase	−	14768	15512	744
rps2	gene	ribosomal-protein	−	15851	16688	837
rpoC2	gene	rna-polymerase	−	16784	20978	4194
rpoC1	gene	rna-polymerase	−	21132	23941	2809
rpoB	gene	rna-polymerase	−	23967	27180	3213
trnC-GCA	gene	translation-rna	+	28335	28406	71
petN	gene	cytochrome	+	29117	29207	90
psbM	gene	photosystem-ii	−	30194	30308	114
trnD-GUC	gene	translation-rna	−	30837	30911	74
trnY-GUA	gene	translation-rna	−	31030	31114	84
trnE-UUC	gene	translation-rna	−	31173	31246	73
trnT-GGU	gene	translation-rna	+	31829	31901	72
psbD	gene	photosystem-ii	+	33193	34255	1062
psbC	gene	photosystem-ii	+	34202	35624	1422
trnS-UGA	gene	translation-rna	−	35863	35955	92
psbZ	gene	photosystem-ii	+	36274	36463	189
trnG-GCC	gene	translation-rna	+	36738	36809	71
trnfM-CAU	gene	translation-rna	−	36962	37036	74
rps14	gene	ribosomal-protein	−	37185	37488	303
psaB	gene	photosystem-i	−	37615	39820	2205
psaA	gene	photosystem-i	−	39844	42097	2253
ycf3	gene	other	−	42792	44704	1912
trnS-GGA	gene	translation-rna	+	45044	45131	87
rps4	gene	ribosomal-protein	−	45414	46020	606
trnT-UGU	gene	translation-rna	−	46358	46431	73
trnL-UAA	gene	translation-rna	+	47063	47628	565
trnF-GAA	gene	translation-rna	+	47933	48006	73
ndhJ	gene	nad-dehydrogenase	−	48657	49134	477
ndhK	gene	nad-dehydrogenase	−	49241	49919	678
ndhC	gene	nad-dehydrogenase	−	49971	50334	363
trnV-UAC	gene	translation-rna	−	51329	51982	653
trnM-CAU	gene	translation-rna	+	52162	52235	73
atpE	gene	atp-synthase	−	52445	52847	402
atpB	gene	atp-synthase	−	52843	54340	1497
rbcL	gene	other	+	55085	56549	1464
accD	gene	other	+	57260	58739	1479
psaI	gene	photosystem-i	+	59433	59544	111
ycf4	gene	other	+	59970	60525	555
cemA	gene	other	+	61265	61865	600
petA	gene	cytochrome	+	62071	63034	963
psbJ	gene	photosystem-ii	−	64076	64199	123
psbL	gene	photosystem-ii	−	64333	64450	117
psbF	gene	photosystem-ii	−	64473	64593	120
psbE	gene	photosystem-ii	−	64607	64859	252
petL	gene	cytochrome	+	65766	65862	96
petG	gene	cytochrome	+	66037	66151	114
trnW-CCA	gene	translation-rna	−	66269	66343	74
trnP-UGG	gene	translation-rna	−	66506	66580	74
psaJ	gene	photosystem-i	+	66848	66983	135
rpl33	gene	ribosomal-protein	+	67454	67655	201
rps18	gene	ribosomal-protein	+	67828	68155	327
rpl20	gene	ribosomal-protein	−	68390	68777	387
rps12	gene	ribosomal-protein	−	69561	97673	28112
rps12	gene	ribosomal-protein	+	69561	138304	68743
clpP	gene	other	−	69828	71758	1930
psbB	gene	photosystem-ii	+	72213	73740	1527
psbT	gene	photosystem-ii	+	73931	74033	102
psbN	gene	photosystem-ii	−	74106	74238	132
psbH	gene	photosystem-ii	+	74341	74563	222
petB	gene	cytochrome	+	74687	76058	1371
petD	gene	cytochrome	+	76246	77452	1206
rpoA	gene	rna-polymerase	−	77614	78628	1014
rps11	gene	ribosomal-protein	−	78699	79116	417
rpl36	gene	ribosomal-protein	−	79217	79331	114
infA	gene	other	−	79426	79660	234
rps8	gene	ribosomal-protein	−	79780	80191	411
rpl14	gene	ribosomal-protein	−	80349	80718	369
rpl16	gene	ribosomal-protein	−	80844	82088	1244
rps3	gene	ribosomal-protein	−	82242	82905	663
rpl22	gene	ribosomal-protein	−	82906	83362	456
rps19	gene	ribosomal-protein	−	83426	83705	279
rpl2	gene	ribosomal-protein	−	83760	85243	1483
rpl23	gene	ribosomal-protein	−	85261	85543	282
trnI-CAU	gene	translation-rna	−	85702	85776	74
ycf2	gene	other	+	85864	92662	6798
ycf15	gene	other	+	92752	93001	249
trnL-CAA	gene	translation-rna	−	93261	93342	81
ndhB	gene	nad-dehydrogenase	−	93884	96087	2203
rps7	gene	ribosomal-protein	−	96361	96829	468
trnV-GAC	gene	translation-rna	+	99242	99314	72
rrn16	gene	ribosomal-rna	+	99541	101032	1491
trnI-GAU	gene	translation-rna	+	101330	102351	1021
trnA-UGC	gene	translation-rna	+	102415	103303	888
rrn23	gene	ribosomal-rna	+	103465	106278	2813
rrn4.5	gene	ribosomal-rna	+	106376	106479	103
rrn5	gene	ribosomal-rna	+	106726	106847	121
trnR-ACG	gene	translation-rna	+	107071	107145	74
trnN-GUU	gene	translation-rna	−	107692	107764	72
ndhF	gene	nad-dehydrogenase	−	108788	111080	2292
rpl32	gene	ribosomal-protein	+	111601	111778	177
trnL-UAG	gene	translation-rna	+	112213	112293	80
ccsA	gene	other	+	112386	113361	975
ndhD	gene	nad-dehydrogenase	−	113595	115119	1524
psaC	gene	photosystem-i	−	115224	115470	246
ndhE	gene	nad-dehydrogenase	−	115721	116027	306
ndhG	gene	nad-dehydrogenase	−	116257	116788	531
ndhI	gene	nad-dehydrogenase	−	117152	117653	501
ndhA	gene	nad-dehydrogenase	−	117733	119831	2098
ndhH	gene	nad-dehydrogenase	−	119832	121068	1236
rps15	gene	ribosomal-protein	−	121110	121383	273
ycf1	gene	other	−	121656	126303	4647
trnN-GUU	gene	translation-rna	+	127422	127494	72
trnR-ACG	gene	translation-rna	−	128041	128115	74
rrn5	gene	ribosomal-rna	−	128339	128460	121
rrn4.5	gene	ribosomal-rna	−	128707	128810	103
rrn23	gene	ribosomal-rna	−	128908	131721	2813
trnA-UGC	gene	translation-rna	−	131883	132771	888
trnI-GAU	gene	translation-rna	−	132835	133856	1021
ycf68	gene	other	−	133461	133701	240
rrn16	gene	ribosomal-rna	−	134154	135645	1491
trnV-GAC	gene	translation-rna	−	135872	135944	72
rps7	gene	ribosomal-protein	+	138357	138825	468
ndhB	gene	nad-dehydrogenase	+	139099	141302	2203
trnL-CAA	gene	translation-rna	+	141844	141925	81
ycf15	gene	other	−	142185	142434	249
ycf2	gene	other	−	142524	149322	6798
trnI-CAU	gene	translation-rna	+	149410	149484	74
rpl23	gene	ribosomal-protein	+	149643	149925	282
rpl2	gene	ribosomal-protein	+	149943	151426	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059340.1DNA · accDPQ059340DNA · atpBPQ059340DNA · matKPQ059340DNA · ndhFPQ059340DNA · psbAPQ059340DNA · rbcLPQ059340DNA · rps12PQ059340DNA · ycf1PQ059340