Scutellaria sessilifolia chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PQ059344.1 · 3–76 bp · −
psbA · PQ059344.1 · 370–1,428 bp · −
trnK-UUU · PQ059344.1 · 1,670–4,257 bp · −
matK · PQ059344.1 · 1,965–3,500 bp · −
rps16 · PQ059344.1 · 5,148–6,307 bp · −
trnQ-UUG · PQ059344.1 · 7,402–7,473 bp · −
trnS-GCU · PQ059344.1 · 8,596–8,683 bp · −
atpA · PQ059344.1 · 10,488–12,011 bp · −
atpF · PQ059344.1 · 12,094–13,321 bp · −
atpH · PQ059344.1 · 13,681–13,926 bp · −
atpI · PQ059344.1 · 14,922–15,665 bp · −
rps2 · PQ059344.1 · 16,014–16,724 bp · −
rpoC2 · PQ059344.1 · 16,950–21,155 bp · −
rpoC1 · PQ059344.1 · 21,310–24,139 bp · −
rpoB · PQ059344.1 · 24,166–27,378 bp · −
psbM · PQ059344.1 · 30,414–30,527 bp · −
trnD-GUC · PQ059344.1 · 31,054–31,127 bp · −
trnY-GUA · PQ059344.1 · 31,241–31,324 bp · −
trnE-UUC · PQ059344.1 · 31,384–31,456 bp · −
trnS-UGA · PQ059344.1 · 36,092–36,183 bp · −
trnfM-CAU · PQ059344.1 · 37,187–37,260 bp · −
rps14 · PQ059344.1 · 37,410–37,712 bp · −
psaB · PQ059344.1 · 37,840–40,044 bp · −
psaA · PQ059344.1 · 40,070–42,322 bp · −
ycf3 · PQ059344.1 · 42,996–44,919 bp · −
rps4 · PQ059344.1 · 46,182–46,787 bp · −
trnT-UGU · PQ059344.1 · 47,130–47,202 bp · −
ndhJ · PQ059344.1 · 49,469–49,945 bp · −
ndhK · PQ059344.1 · 50,053–50,730 bp · −
ndhC · PQ059344.1 · 50,783–51,145 bp · −
trnV-UAC · PQ059344.1 · 52,129–52,781 bp · −
atpE · PQ059344.1 · 53,244–53,645 bp · −
atpB · PQ059344.1 · 53,642–55,129 bp · −
psbJ · PQ059344.1 · 64,882–65,004 bp · −
psbL · PQ059344.1 · 65,138–65,359 bp · −
psbF · PQ059344.1 · 65,278–65,397 bp · −
psbE · PQ059344.1 · 65,412–65,663 bp · −
trnW-CCA · PQ059344.1 · 67,062–67,135 bp · −
trnP-UGG · PQ059344.1 · 67,305–67,378 bp · −
rpl20 · PQ059344.1 · 69,185–69,571 bp · −
rps12 · PQ059344.1 · 70,372–70,485 bp · −
rps12 · PQ059344.1 · 97,716–98,506 bp · −
clpP · PQ059344.1 · 70,640–72,571 bp · −
psbN · PQ059344.1 · 74,949–75,080 bp · −
rpoA · PQ059344.1 · 78,452–79,465 bp · −
rps11 · PQ059344.1 · 79,537–79,953 bp · −
rpl36 · PQ059344.1 · 80,055–80,168 bp · −
infA · PQ059344.1 · 80,264–80,497 bp · −
rps8 · PQ059344.1 · 80,617–81,027 bp · −
rpl14 · PQ059344.1 · 81,194–81,562 bp · −
rpl16 · PQ059344.1 · 81,689–82,932 bp · −
rps3 · PQ059344.1 · 83,087–83,749 bp · −
rpl22 · PQ059344.1 · 83,751–84,206 bp · −
rps19 · PQ059344.1 · 84,266–84,544 bp · −
rpl2 · PQ059344.1 · 84,599–86,081 bp · −
rpl23 · PQ059344.1 · 86,100–86,381 bp · −
trnI-CAU · PQ059344.1 · 86,541–86,614 bp · −
trnL-CAA · PQ059344.1 · 94,086–94,166 bp · −
ndhB · PQ059344.1 · 94,709–96,920 bp · −
rps7 · PQ059344.1 · 97,195–97,662 bp · −
trnN-GUU · PQ059344.1 · 108,526–108,597 bp · −
ndhF · PQ059344.1 · 109,674–111,914 bp · −
ndhD · PQ059344.1 · 114,429–115,931 bp · −
psaC · PQ059344.1 · 116,051–116,296 bp · −
ndhE · PQ059344.1 · 116,553–116,858 bp · −
ndhG · PQ059344.1 · 117,089–117,619 bp · −
ndhI · PQ059344.1 · 117,984–118,484 bp · −
ndhA · PQ059344.1 · 118,565–120,663 bp · −
ndhH · PQ059344.1 · 120,665–121,846 bp · −
rps15 · PQ059344.1 · 121,949–122,281 bp · −
ycf1 · PQ059344.1 · 122,488–128,133 bp · −
trnR-ACG · PQ059344.1 · 128,970–129,043 bp · −
rrn5 · PQ059344.1 · 129,278–129,398 bp · −
rrn4.5 · PQ059344.1 · 129,646–129,748 bp · −
rrn23 · PQ059344.1 · 129,847–132,659 bp · −
trnA-UGC · PQ059344.1 · 132,829–133,710 bp · −
trnI-GAU · PQ059344.1 · 133,775–134,786 bp · −
ycf68 · PQ059344.1 · 134,392–134,631 bp · −
rrn16 · PQ059344.1 · 135,085–136,575 bp · −
trnV-GAC · PQ059344.1 · 136,803–136,874 bp · −
ycf15 · PQ059344.1 · 143,119–143,316 bp · −
ycf2 · PQ059344.1 · 143,458–150,246 bp · −
psbK · PQ059344.1 · 7,798–7,983 bp · +
psbI · PQ059344.1 · 8,368–8,478 bp · +
trnG-UCC · PQ059344.1 · 9,385–10,145 bp · +
trnR-UCU · PQ059344.1 · 10,320–10,391 bp · +
trnC-GCA · PQ059344.1 · 28,547–28,617 bp · +
petN · PQ059344.1 · 29,336–29,425 bp · +
trnT-GGU · PQ059344.1 · 32,033–32,104 bp · +
psbD · PQ059344.1 · 33,417–34,478 bp · +
psbC · PQ059344.1 · 34,426–35,847 bp · +
psbZ · PQ059344.1 · 36,503–36,691 bp · +
trnG-GCC · PQ059344.1 · 36,963–37,033 bp · +
trnS-GGA · PQ059344.1 · 45,810–45,896 bp · +
trnL-UAA · PQ059344.1 · 47,886–48,446 bp · +
trnF-GAA · PQ059344.1 · 48,752–48,824 bp · +
trnM-CAU · PQ059344.1 · 52,962–53,034 bp · +
rbcL · PQ059344.1 · 55,881–57,344 bp · +
accD · PQ059344.1 · 58,073–59,539 bp · +
psaI · PQ059344.1 · 60,257–60,367 bp · +
ycf4 · PQ059344.1 · 60,801–61,355 bp · +
cemA · PQ059344.1 · 62,098–62,697 bp · +
petA · PQ059344.1 · 62,904–63,866 bp · +
petL · PQ059344.1 · 66,559–66,654 bp · +
petG · PQ059344.1 · 66,830–66,943 bp · +
psaJ · PQ059344.1 · 67,651–67,785 bp · +
rpl33 · PQ059344.1 · 68,263–68,463 bp · +
rps18 · PQ059344.1 · 68,643–68,948 bp · +
rps12 · PQ059344.1 · 138,443–139,233 bp · +
psbB · PQ059344.1 · 73,056–74,582 bp · +
psbT · PQ059344.1 · 74,774–74,875 bp · +
psbH · PQ059344.1 · 75,184–75,405 bp · +
petB · PQ059344.1 · 75,530–76,899 bp · +
petD · PQ059344.1 · 77,088–78,289 bp · +
ycf2 · PQ059344.1 · 86,703–93,491 bp · +
ycf15 · PQ059344.1 · 93,633–93,830 bp · +
trnV-GAC · PQ059344.1 · 100,075–100,146 bp · +
rrn16 · PQ059344.1 · 100,374–101,864 bp · +
trnI-GAU · PQ059344.1 · 102,163–103,174 bp · +
trnA-UGC · PQ059344.1 · 103,239–104,120 bp · +
rrn23 · PQ059344.1 · 104,290–107,102 bp · +
rrn4.5 · PQ059344.1 · 107,201–107,303 bp · +
rrn5 · PQ059344.1 · 107,551–107,671 bp · +
trnR-ACG · PQ059344.1 · 107,906–107,979 bp · +
rpl32 · PQ059344.1 · 112,436–112,612 bp · +
trnL-UAG · PQ059344.1 · 113,059–113,138 bp · +
ccsA · PQ059344.1 · 113,222–114,196 bp · +
trnN-GUU · PQ059344.1 · 128,352–128,423 bp · +
rps7 · PQ059344.1 · 139,287–139,754 bp · +
ndhB · PQ059344.1 · 140,029–142,240 bp · +
trnL-CAA · PQ059344.1 · 142,783–142,863 bp · +
trnI-CAU · PQ059344.1 · 150,335–150,408 bp · +
rpl23 · PQ059344.1 · 150,568–150,849 bp · +
rpl2 · PQ059344.1 · 150,868–152,350 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Scutellaria sessilifolia
ANNOTATED PLASTOME
PQ059344.1
152,445 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38111 76222 114334 152445 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU ycf68 rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 3 76 74 Locate
psbA gene − 370 1428 1059 Locate
trnK-UUU gene − 1670 4257 2588 Locate
matK gene − 1965 3500 1536 Locate
rps16 gene − 5148 6307 1160 Locate
trnQ-UUG gene − 7402 7473 72 Locate
psbK gene + 7798 7983 186 Locate
psbI gene + 8368 8478 111 Locate
trnS-GCU gene − 8596 8683 88 Locate
trnG-UCC gene + 9385 10145 761 Locate
trnR-UCU gene + 10320 10391 72 Locate
atpA gene − 10488 12011 1524 Locate
atpF gene − 12094 13321 1228 Locate
atpH gene − 13681 13926 246 Locate
atpI gene − 14922 15665 744 Locate
rps2 gene − 16014 16724 711 Locate
rpoC2 gene − 16950 21155 4206 Locate
rpoC1 gene − 21310 24139 2830 Locate
rpoB gene − 24166 27378 3213 Locate
trnC-GCA gene + 28547 28617 71 Locate
petN gene + 29336 29425 90 Locate
psbM gene − 30414 30527 114 Locate
trnD-GUC gene − 31054 31127 74 Locate
trnY-GUA gene − 31241 31324 84 Locate
trnE-UUC gene − 31384 31456 73 Locate
trnT-GGU gene + 32033 32104 72 Locate
psbD gene + 33417 34478 1062 Locate
psbC gene + 34426 35847 1422 Locate
trnS-UGA gene − 36092 36183 92 Locate
psbZ gene + 36503 36691 189 Locate
trnG-GCC gene + 36963 37033 71 Locate
trnfM-CAU gene − 37187 37260 74 Locate
rps14 gene − 37410 37712 303 Locate
psaB gene − 37840 40044 2205 Locate
psaA gene − 40070 42322 2253 Locate
ycf3 gene − 42996 44919 1924 Locate
trnS-GGA gene + 45810 45896 87 Locate
rps4 gene − 46182 46787 606 Locate
trnT-UGU gene − 47130 47202 73 Locate
trnL-UAA gene + 47886 48446 561 Locate
trnF-GAA gene + 48752 48824 73 Locate
ndhJ gene − 49469 49945 477 Locate
ndhK gene − 50053 50730 678 Locate
ndhC gene − 50783 51145 363 Locate
trnV-UAC gene − 52129 52781 653 Locate
trnM-CAU gene + 52962 53034 73 Locate
atpE gene − 53244 53645 402 Locate
atpB gene − 53642 55129 1488 Locate
rbcL gene + 55881 57344 1464 Locate
accD gene + 58073 59539 1467 Locate
psaI gene + 60257 60367 111 Locate
ycf4 gene + 60801 61355 555 Locate
cemA gene + 62098 62697 600 Locate
petA gene + 62904 63866 963 Locate
psbJ gene − 64882 65004 123 Locate
psbL gene − 65138 65359 222 Locate
psbF gene − 65278 65397 120 Locate
psbE gene − 65412 65663 252 Locate
petL gene + 66559 66654 96 Locate
petG gene + 66830 66943 114 Locate
trnW-CCA gene − 67062 67135 74 Locate
trnP-UGG gene − 67305 67378 74 Locate
psaJ gene + 67651 67785 135 Locate
rpl33 gene + 68263 68463 201 Locate
rps18 gene + 68643 68948 306 Locate
rpl20 gene − 69185 69571 387 Locate
rps12 gene − 70372 70485 114 Locate
clpP gene − 70640 72571 1932 Locate
psbB gene + 73056 74582 1527 Locate
psbT gene + 74774 74875 102 Locate
psbN gene − 74949 75080 132 Locate
psbH gene + 75184 75405 222 Locate
petB gene + 75530 76899 1370 Locate
petD gene + 77088 78289 1202 Locate
rpoA gene − 78452 79465 1014 Locate
rps11 gene − 79537 79953 417 Locate
rpl36 gene − 80055 80168 114 Locate
infA gene − 80264 80497 234 Locate
rps8 gene − 80617 81027 411 Locate
rpl14 gene − 81194 81562 369 Locate
rpl16 gene − 81689 82932 1244 Locate
rps3 gene − 83087 83749 663 Locate
rpl22 gene − 83751 84206 456 Locate
rps19 gene − 84266 84544 279 Locate
rpl2 gene − 84599 86081 1483 Locate
rpl23 gene − 86100 86381 282 Locate
trnI-CAU gene − 86541 86614 74 Locate
ycf2 gene + 86703 93491 6789 Locate
ycf15 gene + 93633 93830 198 Locate
trnL-CAA gene − 94086 94166 81 Locate
ndhB gene − 94709 96920 2212 Locate
rps7 gene − 97195 97662 468 Locate
rps12 gene − 97716 98506 791 Locate
trnV-GAC gene + 100075 100146 72 Locate
rrn16 gene + 100374 101864 1491 Locate
trnI-GAU gene + 102163 103174 1012 Locate
trnA-UGC gene + 103239 104120 882 Locate
rrn23 gene + 104290 107102 2813 Locate
rrn4.5 gene + 107201 107303 103 Locate
rrn5 gene + 107551 107671 121 Locate
trnR-ACG gene + 107906 107979 74 Locate
trnN-GUU gene − 108526 108597 72 Locate
ndhF gene − 109674 111914 2241 Locate
rpl32 gene + 112436 112612 177 Locate
trnL-UAG gene + 113059 113138 80 Locate
ccsA gene + 113222 114196 975 Locate
ndhD gene − 114429 115931 1503 Locate
psaC gene − 116051 116296 246 Locate
ndhE gene − 116553 116858 306 Locate
ndhG gene − 117089 117619 531 Locate
ndhI gene − 117984 118484 501 Locate
ndhA gene − 118565 120663 2099 Locate
ndhH gene − 120665 121846 1182 Locate
rps15 gene − 121949 122281 333 Locate
ycf1 gene − 122488 128133 5646 Locate
trnN-GUU gene + 128352 128423 72 Locate
trnR-ACG gene − 128970 129043 74 Locate
rrn5 gene − 129278 129398 121 Locate
rrn4.5 gene − 129646 129748 103 Locate
rrn23 gene − 129847 132659 2813 Locate
trnA-UGC gene − 132829 133710 882 Locate
trnI-GAU gene − 133775 134786 1012 Locate
ycf68 gene − 134392 134631 240 Locate
rrn16 gene − 135085 136575 1491 Locate
trnV-GAC gene − 136803 136874 72 Locate
rps12 gene + 138443 139233 791 Locate
rps7 gene + 139287 139754 468 Locate
ndhB gene + 140029 142240 2212 Locate
trnL-CAA gene + 142783 142863 81 Locate
ycf15 gene − 143119 143316 198 Locate
ycf2 gene − 143458 150246 6789 Locate
trnI-CAU gene + 150335 150408 74 Locate
rpl23 gene + 150568 150849 282 Locate
rpl2 gene + 150868 152350 1483 Locate
Status Available
Accession PQ059344.1
Length 152,445 bp
GC content 38.3%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources