Coordinate-aware organelle record

Scutellaria sibthorpii chloroplast genome

Available PQ059217.1 151,990 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	394	1453	1059
trnK-UUU	gene	translation-rna	−	1694	4287	2593
matK	gene	other	−	1983	3528	1545
rps16	gene	ribosomal-protein	−	5198	6370	1172
trnQ-UUG	gene	translation-rna	−	7481	7553	72
psbK	gene	photosystem-ii	+	7877	8063	186
psbI	gene	photosystem-ii	+	8460	8571	111
trnS-GCU	gene	translation-rna	−	8669	8757	88
trnG-UCC	gene	translation-rna	+	9449	10205	756
trnR-UCU	gene	translation-rna	+	10374	10446	72
atpA	gene	atp-synthase	−	10542	12066	1524
atpF	gene	atp-synthase	−	12150	13381	1231
atpH	gene	atp-synthase	−	13751	13997	246
atpI	gene	atp-synthase	−	14990	15734	744
rps2	gene	ribosomal-protein	−	16080	16791	711
rpoC2	gene	rna-polymerase	−	17008	21208	4200
rpoC1	gene	rna-polymerase	−	21362	24181	2819
rpoB	gene	rna-polymerase	−	24207	27420	3213
trnC-GCA	gene	translation-rna	+	28602	28673	71
petN	gene	cytochrome	+	29408	29498	90
psbM	gene	photosystem-ii	−	30505	30610	105
trnD-GUC	gene	translation-rna	−	31141	31215	74
trnY-GUA	gene	translation-rna	−	31328	31412	84
trnE-UUC	gene	translation-rna	−	31471	31544	73
trnT-GGU	gene	translation-rna	+	32115	32187	72
psbD	gene	photosystem-ii	+	33503	34565	1062
psbC	gene	photosystem-ii	+	34512	35934	1422
trnS-UGA	gene	translation-rna	−	36168	36260	92
psbZ	gene	photosystem-ii	+	36579	36768	189
trnG-GCC	gene	translation-rna	+	37040	37111	71
trnfM-CAU	gene	translation-rna	−	37255	37329	74
rps14	gene	ribosomal-protein	−	37478	37781	303
psaB	gene	photosystem-i	−	37911	40116	2205
psaA	gene	photosystem-i	−	40141	42394	2253
ycf3	gene	other	−	43098	45025	1927
trnS-GGA	gene	translation-rna	+	45898	45985	87
rps4	gene	ribosomal-protein	−	46269	46875	606
trnT-UGU	gene	translation-rna	−	47215	47288	73
trnL-UAA	gene	translation-rna	+	47950	48517	567
trnF-GAA	gene	translation-rna	+	48822	48895	73
ndhJ	gene	nad-dehydrogenase	−	49544	50021	477
ndhK	gene	nad-dehydrogenase	−	50125	50803	678
ndhC	gene	nad-dehydrogenase	−	50855	51218	363
trnV-UAC	gene	translation-rna	−	52206	52865	659
trnM-CAU	gene	translation-rna	+	53045	53118	73
atpE	gene	atp-synthase	−	53326	53728	402
atpB	gene	atp-synthase	−	53724	55221	1497
rbcL	gene	other	+	55968	57432	1464
accD	gene	other	+	58157	59648	1491
psaI	gene	photosystem-i	+	59885	59996	111
ycf4	gene	other	+	60429	60984	555
cemA	gene	other	+	61597	62197	600
petA	gene	cytochrome	+	62403	63366	963
psbJ	gene	photosystem-ii	−	64387	64510	123
psbL	gene	photosystem-ii	−	64643	64865	222
psbF	gene	photosystem-ii	−	64783	64903	120
psbE	gene	photosystem-ii	−	64917	65169	252
petL	gene	cytochrome	+	66085	66181	96
petG	gene	cytochrome	+	66356	66470	114
trnW-CCA	gene	translation-rna	−	66578	66652	74
trnP-UGG	gene	translation-rna	−	66821	66895	74
psaJ	gene	photosystem-i	+	67167	67302	135
rpl33	gene	ribosomal-protein	+	67770	67971	201
rps18	gene	ribosomal-protein	+	68145	68451	306
rpl20	gene	ribosomal-protein	−	68691	69078	387
rps12	gene	ribosomal-protein	−	69860	97974	28114
rps12	gene	ribosomal-protein	+	69860	138751	68891
clpP	gene	other	−	70127	72063	1936
psbB	gene	photosystem-ii	+	72516	74043	1527
psbT	gene	photosystem-ii	+	74223	74331	108
psbN	gene	photosystem-ii	−	74391	74523	132
psbH	gene	photosystem-ii	+	74626	74848	222
petB	gene	cytochrome	+	74972	76341	1369
petD	gene	cytochrome	+	76529	77741	1212
rpoA	gene	rna-polymerase	−	77903	78917	1014
rps11	gene	ribosomal-protein	−	78988	79405	417
rpl36	gene	ribosomal-protein	−	79506	79620	114
infA	gene	other	−	79715	79949	234
rps8	gene	ribosomal-protein	−	80071	80482	411
rpl14	gene	ribosomal-protein	−	80646	81015	369
rpl16	gene	ribosomal-protein	−	81141	82373	1232
rps3	gene	ribosomal-protein	−	82527	83190	663
rpl22	gene	ribosomal-protein	−	83191	83647	456
rps19	gene	ribosomal-protein	−	83706	83985	279
rpl2	gene	ribosomal-protein	−	84040	85523	1483
rpl23	gene	ribosomal-protein	−	85541	85823	282
trnI-CAU	gene	translation-rna	−	85982	86056	74
ycf2	gene	other	+	86144	92954	6810
ycf15	gene	other	+	93044	93293	249
trnL-CAA	gene	translation-rna	−	93553	93634	81
ndhB	gene	nad-dehydrogenase	−	94176	96334	2158
rps7	gene	ribosomal-protein	−	96662	97130	468
trnV-GAC	gene	translation-rna	+	99546	99618	72
rrn16	gene	ribosomal-rna	+	99840	101331	1491
trnI-GAU	gene	translation-rna	+	101629	102648	1019
trnA-UGC	gene	translation-rna	+	102712	103598	886
rrn23	gene	ribosomal-rna	+	103767	106579	2812
rrn4.5	gene	ribosomal-rna	+	106677	106780	103
rrn5	gene	ribosomal-rna	+	107027	107148	121
trnR-ACG	gene	translation-rna	+	107382	107456	74
trnN-GUU	gene	translation-rna	−	108011	108083	72
ndhF	gene	nad-dehydrogenase	−	109159	111400	2241
rpl32	gene	ribosomal-protein	+	111913	112090	177
trnL-UAG	gene	translation-rna	+	112524	112604	80
ccsA	gene	other	+	112690	113665	975
ndhD	gene	nad-dehydrogenase	−	113902	115405	1503
psaC	gene	photosystem-i	−	115537	115783	246
ndhE	gene	nad-dehydrogenase	−	116038	116344	306
ndhG	gene	nad-dehydrogenase	−	116567	117098	531
ndhI	gene	nad-dehydrogenase	−	117446	117947	501
ndhA	gene	nad-dehydrogenase	−	118027	120137	2110
ndhH	gene	nad-dehydrogenase	−	120138	121350	1212
rps15	gene	ribosomal-protein	−	121416	121749	333
ycf1	gene	other	−	121957	127633	5676
trnN-GUU	gene	translation-rna	+	127851	127923	72
trnR-ACG	gene	translation-rna	−	128478	128552	74
rrn5	gene	ribosomal-rna	−	128786	128907	121
rrn4.5	gene	ribosomal-rna	−	129154	129257	103
rrn23	gene	ribosomal-rna	−	129355	132167	2812
trnA-UGC	gene	translation-rna	−	132336	133222	886
trnI-GAU	gene	translation-rna	−	133286	134305	1019
ycf68	gene	other	−	133856	134150	294
rrn16	gene	ribosomal-rna	−	134603	136094	1491
trnV-GAC	gene	translation-rna	−	136316	136388	72
rps7	gene	ribosomal-protein	+	138804	139272	468
ndhB	gene	nad-dehydrogenase	+	139600	141758	2158
trnL-CAA	gene	translation-rna	+	142300	142381	81
ycf15	gene	other	−	142641	142890	249
ycf2	gene	other	−	142980	149790	6810
trnI-CAU	gene	translation-rna	+	149878	149952	74
rpl23	gene	ribosomal-protein	+	150111	150393	282
rpl2	gene	ribosomal-protein	+	150411	151894	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059217.1DNA · accDPQ059217DNA · atpBPQ059217DNA · matKPQ059217DNA · ndhFPQ059217DNA · psbAPQ059217DNA · rbcLPQ059217DNA · rps12PQ059217DNA · ycf1PQ059217