Coordinate-aware organelle record

Scutellaria sieberi chloroplast genome

Available PQ059342.1 151,996 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	394	1453	1059
trnK-UUU	gene	translation-rna	−	1694	4288	2594
matK	gene	other	−	1983	3528	1545
rps16	gene	ribosomal-protein	−	5199	6372	1173
trnQ-UUG	gene	translation-rna	−	7483	7555	72
psbK	gene	photosystem-ii	+	7879	8065	186
psbI	gene	photosystem-ii	+	8462	8573	111
trnS-GCU	gene	translation-rna	−	8672	8760	88
trnG-UCC	gene	translation-rna	+	9455	10210	755
trnR-UCU	gene	translation-rna	+	10375	10447	72
atpA	gene	atp-synthase	−	10543	12067	1524
atpF	gene	atp-synthase	−	12151	13380	1229
atpH	gene	atp-synthase	−	13751	13997	246
atpI	gene	atp-synthase	−	14990	15734	744
rps2	gene	ribosomal-protein	−	16081	16792	711
rpoC2	gene	rna-polymerase	−	17009	21209	4200
rpoC1	gene	rna-polymerase	−	21363	24182	2819
rpoB	gene	rna-polymerase	−	24208	27421	3213
trnC-GCA	gene	translation-rna	+	28597	28668	71
petN	gene	cytochrome	+	29403	29493	90
psbM	gene	photosystem-ii	−	30500	30605	105
trnD-GUC	gene	translation-rna	−	31136	31210	74
trnY-GUA	gene	translation-rna	−	31323	31407	84
trnE-UUC	gene	translation-rna	−	31466	31539	73
trnT-GGU	gene	translation-rna	+	32110	32182	72
psbD	gene	photosystem-ii	+	33494	34556	1062
psbC	gene	photosystem-ii	+	34503	35925	1422
trnS-UGA	gene	translation-rna	−	36159	36251	92
psbZ	gene	photosystem-ii	+	36570	36759	189
trnG-GCC	gene	translation-rna	+	37031	37102	71
trnfM-CAU	gene	translation-rna	−	37246	37320	74
rps14	gene	ribosomal-protein	−	37469	37772	303
psaB	gene	photosystem-i	−	37902	40107	2205
psaA	gene	photosystem-i	−	40132	42385	2253
ycf3	gene	other	−	43086	45013	1927
trnS-GGA	gene	translation-rna	+	45886	45973	87
rps4	gene	ribosomal-protein	−	46257	46863	606
trnT-UGU	gene	translation-rna	−	47203	47276	73
trnL-UAA	gene	translation-rna	+	47943	48510	567
trnF-GAA	gene	translation-rna	+	48815	48888	73
ndhJ	gene	nad-dehydrogenase	−	49537	50014	477
ndhK	gene	nad-dehydrogenase	−	50118	50796	678
ndhC	gene	nad-dehydrogenase	−	50848	51211	363
trnV-UAC	gene	translation-rna	−	52207	52866	659
trnM-CAU	gene	translation-rna	+	53046	53119	73
atpE	gene	atp-synthase	−	53327	53729	402
atpB	gene	atp-synthase	−	53725	55222	1497
rbcL	gene	other	+	55970	57434	1464
accD	gene	other	+	58159	59650	1491
psaI	gene	photosystem-i	+	59887	59998	111
ycf4	gene	other	+	60431	60986	555
cemA	gene	other	+	61599	62199	600
petA	gene	cytochrome	+	62405	63368	963
psbJ	gene	photosystem-ii	−	64389	64512	123
psbL	gene	photosystem-ii	−	64645	64867	222
psbF	gene	photosystem-ii	−	64785	64905	120
psbE	gene	photosystem-ii	−	64919	65171	252
petL	gene	cytochrome	+	66093	66189	96
petG	gene	cytochrome	+	66364	66478	114
trnW-CCA	gene	translation-rna	−	66586	66660	74
trnP-UGG	gene	translation-rna	−	66829	66903	74
psaJ	gene	photosystem-i	+	67175	67310	135
rpl33	gene	ribosomal-protein	+	67783	67984	201
rps18	gene	ribosomal-protein	+	68158	68464	306
rpl20	gene	ribosomal-protein	−	68704	69091	387
rps12	gene	ribosomal-protein	−	69886	97985	28099
rps12	gene	ribosomal-protein	+	69886	138757	68871
clpP	gene	other	−	70141	72078	1937
psbB	gene	photosystem-ii	+	72531	74058	1527
psbT	gene	photosystem-ii	+	74236	74344	108
psbN	gene	photosystem-ii	−	74404	74536	132
psbH	gene	photosystem-ii	+	74639	74861	222
petB	gene	cytochrome	+	74985	76354	1369
petD	gene	cytochrome	+	76542	77754	1212
rpoA	gene	rna-polymerase	−	77916	78930	1014
rps11	gene	ribosomal-protein	−	79001	79418	417
rpl36	gene	ribosomal-protein	−	79519	79633	114
infA	gene	other	−	79728	79962	234
rps8	gene	ribosomal-protein	−	80084	80495	411
rpl14	gene	ribosomal-protein	−	80658	81027	369
rpl16	gene	ribosomal-protein	−	81153	82384	1231
rps3	gene	ribosomal-protein	−	82538	83201	663
rpl22	gene	ribosomal-protein	−	83202	83658	456
rps19	gene	ribosomal-protein	−	83717	83996	279
rpl2	gene	ribosomal-protein	−	84051	85534	1483
rpl23	gene	ribosomal-protein	−	85552	85834	282
trnI-CAU	gene	translation-rna	−	85993	86067	74
ycf2	gene	other	+	86155	92965	6810
ycf15	gene	other	+	93106	93304	198
trnL-CAA	gene	translation-rna	−	93564	93645	81
ndhB	gene	nad-dehydrogenase	−	94187	96345	2158
rps7	gene	ribosomal-protein	−	96673	97141	468
trnV-GAC	gene	translation-rna	+	99557	99629	72
rrn16	gene	ribosomal-rna	+	99851	101342	1491
trnI-GAU	gene	translation-rna	+	101640	102659	1019
trnA-UGC	gene	translation-rna	+	102723	103608	885
rrn23	gene	ribosomal-rna	+	103777	106589	2812
rrn4.5	gene	ribosomal-rna	+	106687	106790	103
rrn5	gene	ribosomal-rna	+	107037	107158	121
trnR-ACG	gene	translation-rna	+	107392	107466	74
trnN-GUU	gene	translation-rna	−	108021	108093	72
ndhF	gene	nad-dehydrogenase	−	109169	111410	2241
rpl32	gene	ribosomal-protein	+	111924	112101	177
trnL-UAG	gene	translation-rna	+	112534	112614	80
ccsA	gene	other	+	112700	113675	975
ndhD	gene	nad-dehydrogenase	−	113912	115415	1503
psaC	gene	photosystem-i	−	115548	115794	246
ndhE	gene	nad-dehydrogenase	−	116049	116355	306
ndhG	gene	nad-dehydrogenase	−	116578	117109	531
ndhI	gene	nad-dehydrogenase	−	117457	117958	501
ndhA	gene	nad-dehydrogenase	−	118038	120153	2115
ndhH	gene	nad-dehydrogenase	−	120154	121336	1182
rps15	gene	ribosomal-protein	−	121432	121705	273
ycf1	gene	other	−	121973	127640	5667
trnN-GUU	gene	translation-rna	+	127858	127930	72
trnR-ACG	gene	translation-rna	−	128485	128559	74
rrn5	gene	ribosomal-rna	−	128793	128914	121
rrn4.5	gene	ribosomal-rna	−	129161	129264	103
rrn23	gene	ribosomal-rna	−	129362	132174	2812
trnA-UGC	gene	translation-rna	−	132343	133228	885
trnI-GAU	gene	translation-rna	−	133292	134311	1019
ycf68	gene	other	−	133862	134156	294
rrn16	gene	ribosomal-rna	−	134609	136100	1491
trnV-GAC	gene	translation-rna	−	136322	136394	72
rps7	gene	ribosomal-protein	+	138810	139278	468
ndhB	gene	nad-dehydrogenase	+	139606	141764	2158
trnL-CAA	gene	translation-rna	+	142306	142387	81
ycf15	gene	other	−	142647	142845	198
ycf2	gene	other	−	142986	149796	6810
trnI-CAU	gene	translation-rna	+	149884	149958	74
rpl23	gene	ribosomal-protein	+	150117	150399	282
rpl2	gene	ribosomal-protein	+	150417	151900	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059342.1DNA · accDPQ059342DNA · atpBPQ059342DNA · matKPQ059342DNA · ndhFPQ059342DNA · psbAPQ059342DNA · rbcLPQ059342DNA · rps12PQ059342DNA · ycf1PQ059342