Coordinate-aware organelle record

Scutellaria sieversii chloroplast genome

Available PQ059345.1 151,794 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	373	1432	1059
trnK-UUU	gene	translation-rna	−	1673	4255	2582
matK	gene	other	−	1963	3490	1527
rps16	gene	ribosomal-protein	−	5156	6316	1160
trnQ-UUG	gene	translation-rna	−	7060	7132	72
psbK	gene	photosystem-ii	+	7456	7642	186
psbI	gene	photosystem-ii	+	8032	8143	111
trnS-GCU	gene	translation-rna	−	8261	8349	88
trnG-UCC	gene	translation-rna	+	9047	9804	757
trnR-UCU	gene	translation-rna	+	9978	10050	72
atpA	gene	atp-synthase	−	10146	11670	1524
atpF	gene	atp-synthase	−	11751	12980	1229
atpH	gene	atp-synthase	−	13334	13580	246
atpI	gene	atp-synthase	−	14567	15311	744
rps2	gene	ribosomal-protein	−	15656	16367	711
rpoC2	gene	rna-polymerase	−	16581	20787	4206
rpoC1	gene	rna-polymerase	−	20941	23778	2837
rpoB	gene	rna-polymerase	−	23804	27017	3213
trnC-GCA	gene	translation-rna	+	28177	28248	71
petN	gene	cytochrome	+	28962	29052	90
psbM	gene	photosystem-ii	−	30094	30199	105
trnD-GUC	gene	translation-rna	−	30724	30798	74
trnY-GUA	gene	translation-rna	−	30911	30995	84
trnE-UUC	gene	translation-rna	−	31054	31127	73
trnT-GGU	gene	translation-rna	+	31702	31774	72
psbD	gene	photosystem-ii	+	33077	34139	1062
psbC	gene	photosystem-ii	+	34086	35508	1422
trnS-UGA	gene	translation-rna	−	35743	35835	92
psbZ	gene	photosystem-ii	+	36150	36339	189
trnG-GCC	gene	translation-rna	+	36616	36687	71
trnfM-CAU	gene	translation-rna	−	36834	36908	74
rps14	gene	ribosomal-protein	−	37062	37365	303
psaB	gene	photosystem-i	−	37493	39698	2205
psaA	gene	photosystem-i	−	39723	41976	2253
ycf3	gene	other	−	42668	44592	1924
trnS-GGA	gene	translation-rna	+	45474	45561	87
rps4	gene	ribosomal-protein	−	45836	46442	606
trnT-UGU	gene	translation-rna	−	46791	46864	73
trnL-UAA	gene	translation-rna	+	47544	48104	560
trnF-GAA	gene	translation-rna	+	48405	48478	73
ndhJ	gene	nad-dehydrogenase	−	49124	49601	477
ndhK	gene	nad-dehydrogenase	−	49709	50471	762
ndhC	gene	nad-dehydrogenase	−	50440	50803	363
trnV-UAC	gene	translation-rna	−	51788	52441	653
trnM-CAU	gene	translation-rna	+	52629	52702	73
atpE	gene	atp-synthase	−	52895	53297	402
atpB	gene	atp-synthase	−	53293	54790	1497
rbcL	gene	other	+	55540	57004	1464
accD	gene	other	+	57714	59193	1479
psaI	gene	photosystem-i	+	59899	60010	111
ycf4	gene	other	+	60443	60998	555
cemA	gene	other	+	61746	62346	600
petA	gene	cytochrome	+	62552	63515	963
psbJ	gene	photosystem-ii	−	64514	64637	123
psbL	gene	photosystem-ii	−	64770	64887	117
psbF	gene	photosystem-ii	−	64910	65030	120
psbE	gene	photosystem-ii	−	65044	65296	252
petL	gene	cytochrome	+	66173	66269	96
petG	gene	cytochrome	+	66444	66558	114
trnW-CCA	gene	translation-rna	−	66676	66750	74
trnP-UGG	gene	translation-rna	−	66919	66993	74
psaJ	gene	photosystem-i	+	67201	67399	198
rpl33	gene	ribosomal-protein	+	67874	68075	201
rps18	gene	ribosomal-protein	+	68249	68555	306
rpl20	gene	ribosomal-protein	−	68789	69176	387
rps12	gene	ribosomal-protein	−	69958	98021	28063
rps12	gene	ribosomal-protein	+	69958	138562	68604
clpP	gene	other	−	70225	72153	1928
psbB	gene	photosystem-ii	+	72604	74131	1527
psbT	gene	photosystem-ii	+	74322	74430	108
psbN	gene	photosystem-ii	−	74490	74622	132
psbH	gene	photosystem-ii	+	74725	74947	222
petB	gene	cytochrome	+	75071	76442	1371
petD	gene	cytochrome	+	76624	77831	1207
rpoA	gene	rna-polymerase	−	78185	78986	801
rps11	gene	ribosomal-protein	−	79057	79474	417
rpl36	gene	ribosomal-protein	−	79575	79689	114
infA	gene	other	−	79783	80017	234
rps8	gene	ribosomal-protein	−	80140	80551	411
rpl14	gene	ribosomal-protein	−	80702	81071	369
rpl16	gene	ribosomal-protein	−	81197	82431	1234
rps3	gene	ribosomal-protein	−	82586	83249	663
rpl22	gene	ribosomal-protein	−	83250	83706	456
rps19	gene	ribosomal-protein	−	83765	84044	279
rpl2	gene	ribosomal-protein	−	84098	85580	1482
rpl23	gene	ribosomal-protein	−	85598	85880	282
trnI-CAU	gene	translation-rna	−	86039	86113	74
ycf2	gene	other	+	86201	93002	6801
ycf15	gene	other	+	93143	93341	198
trnL-CAA	gene	translation-rna	−	93600	93681	81
ndhB	gene	nad-dehydrogenase	−	94223	96381	2158
rps7	gene	ribosomal-protein	−	96709	97177	468
trnV-GAC	gene	translation-rna	+	99592	99664	72
rrn16	gene	ribosomal-rna	+	99890	101381	1491
trnI-GAU	gene	translation-rna	+	101679	102700	1021
trnA-UGC	gene	translation-rna	+	102764	103649	885
rrn23	gene	ribosomal-rna	+	103818	106630	2812
rrn4.5	gene	ribosomal-rna	+	106728	106831	103
rrn5	gene	ribosomal-rna	+	107078	107199	121
trnR-ACG	gene	translation-rna	+	107433	107507	74
trnN-GUU	gene	translation-rna	−	108055	108127	72
ndhF	gene	nad-dehydrogenase	−	109183	111445	2262
rpl32	gene	ribosomal-protein	+	111772	111949	177
trnL-UAG	gene	translation-rna	+	112395	112475	80
ccsA	gene	other	+	112576	113551	975
ndhD	gene	nad-dehydrogenase	−	113807	115310	1503
psaC	gene	photosystem-i	−	115437	115683	246
ndhE	gene	nad-dehydrogenase	−	115938	116244	306
ndhG	gene	nad-dehydrogenase	−	116460	116991	531
ndhI	gene	nad-dehydrogenase	−	117357	117858	501
ndhA	gene	nad-dehydrogenase	−	117943	120065	2122
ndhH	gene	nad-dehydrogenase	−	120066	121248	1182
rps15	gene	ribosomal-protein	−	121344	121617	273
ycf1	gene	other	−	121810	127447	5637
trnN-GUU	gene	translation-rna	+	127665	127737	72
trnR-ACG	gene	translation-rna	−	128285	128359	74
rrn5	gene	ribosomal-rna	−	128593	128714	121
rrn4.5	gene	ribosomal-rna	−	128961	129064	103
rrn23	gene	ribosomal-rna	−	129162	131974	2812
trnA-UGC	gene	translation-rna	−	132143	133028	885
trnI-GAU	gene	translation-rna	−	133092	134113	1021
ycf68	gene	other	−	133664	133958	294
rrn16	gene	ribosomal-rna	−	134411	135902	1491
trnV-GAC	gene	translation-rna	−	136128	136200	72
rps7	gene	ribosomal-protein	+	138615	139083	468
ndhB	gene	nad-dehydrogenase	+	139411	141569	2158
trnL-CAA	gene	translation-rna	+	142111	142192	81
ycf15	gene	other	−	142451	142649	198
ycf2	gene	other	−	142790	149591	6801
trnI-CAU	gene	translation-rna	+	149679	149753	74
rpl23	gene	ribosomal-protein	+	149912	150194	282
rpl2	gene	ribosomal-protein	+	150212	151694	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059345.1DNA · accDPQ059345DNA · atpBPQ059345DNA · matKPQ059345DNA · ndhFPQ059345DNA · psbAPQ059345DNA · rbcLPQ059345DNA · rps12PQ059345DNA · ycf1PQ059345