Coordinate-aware organelle record

Scutellaria siphocampyloides chloroplast genome

Available MW420977.1 152,533 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	362	1421	1059
trnK-UUU	gene	translation-rna	−	1657	4246	2589
matK	gene	other	−	1948	3484	1536
rps16	gene	ribosomal-protein	−	5140	6310	1170
trnQ-UUC	gene	translation-rna	−	7435	7507	72
psbK	gene	photosystem-ii	+	7831	8017	186
psbI	gene	photosystem-ii	+	8407	8518	111
trnS-GCU	gene	translation-rna	−	8634	8722	88
trnG-CGA	gene	translation-rna	+	9400	10160	760
trnR-UCU	gene	translation-rna	+	10334	10406	72
atpA	gene	atp-synthase	−	10502	12026	1524
atpF	gene	atp-synthase	−	12099	13334	1235
atpH	gene	atp-synthase	−	13699	13945	246
atpI	gene	atp-synthase	−	14940	15684	744
rps2	gene	ribosomal-protein	−	16034	16745	711
rpoC2	gene	rna-polymerase	−	16961	21167	4206
rpoC1	gene	rna-polymerase	−	21321	24159	2838
rpoB	gene	rna-polymerase	−	24185	27398	3213
trnC-GCA	gene	translation-rna	+	28559	28630	71
petN	gene	cytochrome	+	29348	29438	90
psbM	gene	photosystem-ii	−	30434	30539	105
trnD-GUC	gene	translation-rna	−	31064	31138	74
trnY-GUA	gene	translation-rna	−	31251	31335	84
trnE-UUC	gene	translation-rna	−	31394	31467	73
trnT-GGU	gene	translation-rna	+	32049	32121	72
psbD	gene	photosystem-ii	+	33424	34486	1062
psbC	gene	photosystem-ii	+	34433	35855	1422
trnS-UCA	gene	translation-rna	−	36097	36190	93
psbZ	gene	photosystem-ii	+	36510	36699	189
trnG-GCC	gene	translation-rna	+	36970	37041	71
trnfM-CAU	gene	translation-rna	−	37194	37268	74
rps14	gene	ribosomal-protein	−	37417	37720	303
psaB	gene	photosystem-i	−	37845	40050	2205
psaA	gene	photosystem-i	−	40075	42328	2253
ycf3	gene	other	−	43002	44916	1914
trnS-GGA	gene	translation-rna	+	45803	45890	87
rps4	gene	ribosomal-protein	−	46175	46781	606
trnT-UGU	gene	translation-rna	−	47119	47192	73
trnL-UAA	gene	translation-rna	+	47861	48430	569
trnF-GAA	gene	translation-rna	+	48734	48807	73
ndhJ	gene	nad-dehydrogenase	−	49461	49938	477
ndhK	gene	nad-dehydrogenase	−	50046	50724	678
ndhC	gene	nad-dehydrogenase	−	50776	51139	363
trnV-UAC	gene	translation-rna	−	52129	52782	653
trnM-CAU	gene	translation-rna	+	52962	53035	73
atpE	gene	atp-synthase	−	53244	53646	402
atpB	gene	atp-synthase	−	53642	55130	1488
rbcL	gene	other	+	55896	57339	1443
accD	gene	other	+	58060	59527	1467
psaI	gene	photosystem-i	+	60227	60338	111
ycf4	gene	other	+	60753	61308	555
cemA	gene	other	+	61993	62653	660
petA	gene	cytochrome	+	62859	63822	963
pabJ	gene	other	−	64845	64968	123
psbL	gene	photosystem-ii	−	65101	65218	117
psbF	gene	photosystem-ii	−	65241	65361	120
psbE	gene	photosystem-ii	−	65375	65627	252
petL	gene	cytochrome	+	66534	66630	96
petG	gene	cytochrome	+	66805	66919	114
trnW-CCA	gene	translation-rna	−	67037	67111	74
trnP-UGG	gene	translation-rna	−	67280	67354	74
psbJ	gene	photosystem-ii	+	67626	67761	135
rpl33	gene	ribosomal-protein	+	68232	68433	201
rps18	gene	ribosomal-protein	+	68607	68913	306
rpl20	gene	ribosomal-protein	−	69149	69536	387
rps12	gene	ribosomal-protein	−	70320	98475	28155
rps12	gene	ribosomal-protein	+	70320	139300	68980
clpP	gene	other	−	70588	72520	1932
psbB	gene	photosystem-ii	+	72999	74526	1527
psbT	gene	photosystem-ii	+	74716	74818	102
psbN	gene	photosystem-ii	−	74891	75023	132
psbH	gene	photosystem-ii	+	75126	75348	222
petB	gene	cytochrome	+	75472	76841	1369
petD	gene	cytochrome	+	77029	78231	1202
rpoA	gene	rna-polymerase	−	78393	79407	1014
rps11	gene	ribosomal-protein	−	79478	79895	417
rpl36	gene	ribosomal-protein	−	79996	80110	114
infA	gene	other	−	80205	80439	234
rps8	gene	ribosomal-protein	−	80559	80970	411
rpl14	gene	ribosomal-protein	−	81140	81509	369
rpl16	gene	ribosomal-protein	−	81635	82880	1245
rps3	gene	ribosomal-protein	−	83034	83697	663
rpl22	gene	ribosomal-protein	−	83698	84154	456
rps19	gene	ribosomal-protein	−	84213	84492	279
rpl2	gene	ribosomal-protein	−	84546	86029	1483
rpl23	gene	ribosomal-protein	−	86047	86329	282
trnI-CAU	gene	translation-rna	−	86488	86562	74
ycf2	gene	other	+	86650	93460	6810
ycf15	gene	other	+	93601	93799	198
trnL-CAA	gene	translation-rna	−	94054	94135	81
ndhB	gene	nad-dehydrogenase	−	94677	96889	2212
rps7	gene	ribosomal-protein	−	97163	97631	468
trnV-GAC	gene	translation-rna	+	100058	100130	72
rrn16	gene	ribosomal-rna	+	100357	101848	1491
trnI-GAU	gene	translation-rna	+	102146	103166	1020
trnA-UGC	gene	translation-rna	+	103231	104113	882
rrn23	gene	ribosomal-rna	+	104282	107095	2813
rrn4.5	gene	ribosomal-rna	+	107193	107296	103
rrn5	gene	ribosomal-rna	+	107543	107664	121
trnR-ACG	gene	translation-rna	+	107898	107972	74
trnN-GUU	gene	translation-rna	+	108519	108591	72
ndhF	gene	nad-dehydrogenase	−	109667	111908	2241
rpl32	gene	ribosomal-protein	+	112431	112608	177
trnL-UAG	gene	translation-rna	+	113034	113114	80
ccsA	gene	other	+	113211	114186	975
ndhD	gene	nad-dehydrogenase	−	114418	115939	1521
psaC	gene	photosystem-i	−	116040	116286	246
ndhE	gene	nad-dehydrogenase	−	116542	116848	306
ndhG	gene	nad-dehydrogenase	−	117057	117588	531
ndhI	gene	nad-dehydrogenase	−	117952	118453	501
ndhA	gene	nad-dehydrogenase	−	118533	120626	2093
ndhH	gene	nad-dehydrogenase	−	120627	121809	1182
rps15	gene	ribosomal-protein	−	121911	122184	273
ycf1	gene	other	−	122451	128064	5613
trnN-GUU	gene	translation-rna	+	128393	128465	72
trnR-ACG	gene	translation-rna	−	129012	129086	74
rrn5	gene	ribosomal-rna	−	129320	129441	121
rrn4.5	gene	ribosomal-rna	−	129688	129791	103
rrn23	gene	ribosomal-rna	−	129889	132702	2813
trnA-UGC	gene	translation-rna	−	132871	133753	882
trnI-GAU	gene	translation-rna	−	133818	134838	1020
rrn16	gene	ribosomal-rna	−	135136	136627	1491
trnV-GAC	gene	translation-rna	−	136854	136926	72
rps7	gene	ribosomal-protein	+	139353	139821	468
ndhB	gene	nad-dehydrogenase	+	140095	142307	2212
trnL-CAA	gene	translation-rna	+	142849	142930	81
ycf15	gene	other	−	143185	143383	198
ycf2	gene	other	−	143524	150334	6810
trnI-CAU	gene	translation-rna	+	150422	150496	74
rpl23	gene	ribosomal-protein	+	150655	150937	282
rpl2	gene	ribosomal-protein	+	150955	152438	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW420977.1DNA · accDMW420977DNA · atpBMW420977DNA · matKMW420977DNA · ndhFMW420977DNA · psbAMW420977DNA · rbcLMW420977DNA · rps12MW420977DNA · ycf1MW420977