Scutellaria sosnowskyi chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PQ075921.1 · 4–77 bp · −
psbA · PQ075921.1 · 375–1,433 bp · −
trnK-UUU · PQ075921.1 · 1,675–4,257 bp · −
matK · PQ075921.1 · 1,965–3,491 bp · −
rps16 · PQ075921.1 · 5,157–6,314 bp · −
trnQ-UUG · PQ075921.1 · 7,444–7,515 bp · −
trnS-GCU · PQ075921.1 · 8,641–8,728 bp · −
atpA · PQ075921.1 · 10,516–12,039 bp · −
atpF · PQ075921.1 · 12,121–13,349 bp · −
atpH · PQ075921.1 · 13,712–13,957 bp · −
atpI · PQ075921.1 · 14,944–15,687 bp · −
rps2 · PQ075921.1 · 16,028–16,738 bp · −
rpoC2 · PQ075921.1 · 16,953–21,158 bp · −
rpoC1 · PQ075921.1 · 21,313–24,154 bp · −
rpoB · PQ075921.1 · 24,181–27,393 bp · −
psbM · PQ075921.1 · 30,456–30,560 bp · −
trnD-GUC · PQ075921.1 · 31,086–31,159 bp · −
trnY-GUA · PQ075921.1 · 31,269–31,352 bp · −
trnE-UUC · PQ075921.1 · 31,412–31,484 bp · −
trnS-UGA · PQ075921.1 · 36,103–36,194 bp · −
trnfM-CAU · PQ075921.1 · 37,192–37,265 bp · −
rps14 · PQ075921.1 · 37,420–37,722 bp · −
psaB · PQ075921.1 · 37,851–40,055 bp · −
psaA · PQ075921.1 · 40,081–42,333 bp · −
ycf3 · PQ075921.1 · 43,029–44,948 bp · −
rps4 · PQ075921.1 · 46,201–46,806 bp · −
trnT-UGU · PQ075921.1 · 47,148–47,220 bp · −
ndhJ · PQ075921.1 · 49,490–49,966 bp · −
ndhK · PQ075921.1 · 50,075–50,836 bp · −
ndhC · PQ075921.1 · 50,806–51,168 bp · −
trnV-UAC · PQ075921.1 · 52,159–52,811 bp · −
atpE · PQ075921.1 · 53,266–53,667 bp · −
atpB · PQ075921.1 · 53,664–55,160 bp · −
psbJ · PQ075921.1 · 64,896–65,018 bp · −
psbL · PQ075921.1 · 65,152–65,373 bp · −
psbF · PQ075921.1 · 65,292–65,411 bp · −
psbE · PQ075921.1 · 65,426–65,677 bp · −
trnW-CCA · PQ075921.1 · 67,053–67,126 bp · −
trnP-UGG · PQ075921.1 · 67,296–67,369 bp · −
rpl20 · PQ075921.1 · 69,165–69,551 bp · −
rps12 · PQ075921.1 · 70,336–70,461 bp · −
rps12 · PQ075921.1 · 97,608–98,398 bp · −
clpP · PQ075921.1 · 70,603–72,531 bp · −
psbN · PQ075921.1 · 74,868–74,999 bp · −
rpoA · PQ075921.1 · 78,552–79,352 bp · −
rps11 · PQ075921.1 · 79,424–79,840 bp · −
rpl36 · PQ075921.1 · 79,942–80,055 bp · −
infA · PQ075921.1 · 80,150–80,383 bp · −
rps8 · PQ075921.1 · 80,506–80,916 bp · −
rpl14 · PQ075921.1 · 81,071–81,439 bp · −
rpl16 · PQ075921.1 · 81,566–82,799 bp · −
rps3 · PQ075921.1 · 82,955–83,617 bp · −
rpl22 · PQ075921.1 · 83,619–84,074 bp · −
rps19 · PQ075921.1 · 84,134–84,412 bp · −
rpl2 · PQ075921.1 · 84,467–85,948 bp · −
rpl23 · PQ075921.1 · 85,967–86,248 bp · −
trnI-CAU · PQ075921.1 · 86,408–86,481 bp · −
trnL-CAA · PQ075921.1 · 93,978–94,058 bp · −
ndhB · PQ075921.1 · 94,601–96,812 bp · −
rps7 · PQ075921.1 · 97,087–97,554 bp · −
trnN-GUU · PQ075921.1 · 108,435–108,506 bp · −
ndhF · PQ075921.1 · 109,563–111,824 bp · −
ndhD · PQ075921.1 · 114,157–115,659 bp · −
psaC · PQ075921.1 · 115,787–116,032 bp · −
ndhE · PQ075921.1 · 116,288–116,593 bp · −
ndhG · PQ075921.1 · 116,810–117,340 bp · −
ndhI · PQ075921.1 · 117,707–118,207 bp · −
ndhA · PQ075921.1 · 118,288–120,409 bp · −
ndhH · PQ075921.1 · 120,411–121,622 bp · −
rps15 · PQ075921.1 · 121,689–121,961 bp · −
ycf1 · PQ075921.1 · 122,155–127,791 bp · −
trnR-ACG · PQ075921.1 · 128,630–128,703 bp · −
rrn5 · PQ075921.1 · 128,938–129,058 bp · −
rrn4.5 · PQ075921.1 · 129,306–129,408 bp · −
rrn23 · PQ075921.1 · 129,507–132,318 bp · −
trnA-UGC · PQ075921.1 · 132,488–133,374 bp · −
trnI-GAU · PQ075921.1 · 133,439–134,459 bp · −
ycf68 · PQ075921.1 · 134,011–134,304 bp · −
rrn16 · PQ075921.1 · 134,758–136,248 bp · −
trnV-GAC · PQ075921.1 · 136,475–136,546 bp · −
ycf15 · PQ075921.1 · 142,798–142,995 bp · −
ycf2 · PQ075921.1 · 143,137–149,946 bp · −
psbK · PQ075921.1 · 7,840–8,025 bp · +
psbI · PQ075921.1 · 8,413–8,523 bp · +
trnG-UCC · PQ075921.1 · 9,426–10,173 bp · +
trnR-UCU · PQ075921.1 · 10,348–10,419 bp · +
trnC-GCA · PQ075921.1 · 28,554–28,624 bp · +
petN · PQ075921.1 · 29,342–29,431 bp · +
trnT-GGU · PQ075921.1 · 32,061–32,132 bp · +
psbD · PQ075921.1 · 33,437–34,498 bp · +
psbC · PQ075921.1 · 34,446–35,867 bp · +
psbZ · PQ075921.1 · 36,511–36,699 bp · +
trnG-GCC · PQ075921.1 · 36,977–37,047 bp · +
trnS-GGA · PQ075921.1 · 45,839–45,925 bp · +
trnL-UAA · PQ075921.1 · 47,905–48,465 bp · +
trnF-GAA · PQ075921.1 · 48,772–48,844 bp · +
trnM-CAU · PQ075921.1 · 53,000–53,072 bp · +
rbcL · PQ075921.1 · 55,912–57,375 bp · +
accD · PQ075921.1 · 58,089–59,567 bp · +
psaI · PQ075921.1 · 60,274–60,384 bp · +
ycf4 · PQ075921.1 · 60,818–61,372 bp · +
cemA · PQ075921.1 · 62,121–62,720 bp · +
petA · PQ075921.1 · 62,927–63,889 bp · +
petL · PQ075921.1 · 66,551–66,646 bp · +
petG · PQ075921.1 · 66,821–66,934 bp · +
psaJ · PQ075921.1 · 67,637–67,771 bp · +
rpl33 · PQ075921.1 · 68,250–68,450 bp · +
rps18 · PQ075921.1 · 68,625–68,930 bp · +
rps12 · PQ075921.1 · 138,118–138,908 bp · +
psbB · PQ075921.1 · 72,983–74,509 bp · +
psbT · PQ075921.1 · 74,700–74,807 bp · +
psbH · PQ075921.1 · 75,103–75,324 bp · +
petB · PQ075921.1 · 75,449–76,813 bp · +
petD · PQ075921.1 · 76,996–78,197 bp · +
ycf2 · PQ075921.1 · 86,570–93,379 bp · +
ycf15 · PQ075921.1 · 93,521–93,718 bp · +
trnV-GAC · PQ075921.1 · 99,970–100,041 bp · +
rrn16 · PQ075921.1 · 100,268–101,758 bp · +
trnI-GAU · PQ075921.1 · 102,057–103,077 bp · +
trnA-UGC · PQ075921.1 · 103,142–104,028 bp · +
rrn23 · PQ075921.1 · 104,198–107,009 bp · +
rrn4.5 · PQ075921.1 · 107,108–107,210 bp · +
rrn5 · PQ075921.1 · 107,458–107,578 bp · +
trnR-ACG · PQ075921.1 · 107,813–107,886 bp · +
rpl32 · PQ075921.1 · 112,152–112,328 bp · +
trnL-UAG · PQ075921.1 · 112,776–112,855 bp · +
ccsA · PQ075921.1 · 112,944–113,918 bp · +
trnN-GUU · PQ075921.1 · 128,010–128,081 bp · +
rps7 · PQ075921.1 · 138,962–139,429 bp · +
ndhB · PQ075921.1 · 139,704–141,915 bp · +
trnL-CAA · PQ075921.1 · 142,458–142,538 bp · +
trnI-CAU · PQ075921.1 · 150,035–150,108 bp · +
rpl23 · PQ075921.1 · 150,268–150,549 bp · +
rpl2 · PQ075921.1 · 150,568–152,049 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Scutellaria sosnowskyi
ANNOTATED PLASTOME
PQ075921.1
152,149 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38037 76074 114112 152149 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU ycf68 rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 4 77 74 Locate
psbA gene − 375 1433 1059 Locate
trnK-UUU gene − 1675 4257 2583 Locate
matK gene − 1965 3491 1527 Locate
rps16 gene − 5157 6314 1158 Locate
trnQ-UUG gene − 7444 7515 72 Locate
psbK gene + 7840 8025 186 Locate
psbI gene + 8413 8523 111 Locate
trnS-GCU gene − 8641 8728 88 Locate
trnG-UCC gene + 9426 10173 748 Locate
trnR-UCU gene + 10348 10419 72 Locate
atpA gene − 10516 12039 1524 Locate
atpF gene − 12121 13349 1229 Locate
atpH gene − 13712 13957 246 Locate
atpI gene − 14944 15687 744 Locate
rps2 gene − 16028 16738 711 Locate
rpoC2 gene − 16953 21158 4206 Locate
rpoC1 gene − 21313 24154 2842 Locate
rpoB gene − 24181 27393 3213 Locate
trnC-GCA gene + 28554 28624 71 Locate
petN gene + 29342 29431 90 Locate
psbM gene − 30456 30560 105 Locate
trnD-GUC gene − 31086 31159 74 Locate
trnY-GUA gene − 31269 31352 84 Locate
trnE-UUC gene − 31412 31484 73 Locate
trnT-GGU gene + 32061 32132 72 Locate
psbD gene + 33437 34498 1062 Locate
psbC gene + 34446 35867 1422 Locate
trnS-UGA gene − 36103 36194 92 Locate
psbZ gene + 36511 36699 189 Locate
trnG-GCC gene + 36977 37047 71 Locate
trnfM-CAU gene − 37192 37265 74 Locate
rps14 gene − 37420 37722 303 Locate
psaB gene − 37851 40055 2205 Locate
psaA gene − 40081 42333 2253 Locate
ycf3 gene − 43029 44948 1920 Locate
trnS-GGA gene + 45839 45925 87 Locate
rps4 gene − 46201 46806 606 Locate
trnT-UGU gene − 47148 47220 73 Locate
trnL-UAA gene + 47905 48465 561 Locate
trnF-GAA gene + 48772 48844 73 Locate
ndhJ gene − 49490 49966 477 Locate
ndhK gene − 50075 50836 762 Locate
ndhC gene − 50806 51168 363 Locate
trnV-UAC gene − 52159 52811 653 Locate
trnM-CAU gene + 53000 53072 73 Locate
atpE gene − 53266 53667 402 Locate
atpB gene − 53664 55160 1497 Locate
rbcL gene + 55912 57375 1464 Locate
accD gene + 58089 59567 1479 Locate
psaI gene + 60274 60384 111 Locate
ycf4 gene + 60818 61372 555 Locate
cemA gene + 62121 62720 600 Locate
petA gene + 62927 63889 963 Locate
psbJ gene − 64896 65018 123 Locate
psbL gene − 65152 65373 222 Locate
psbF gene − 65292 65411 120 Locate
psbE gene − 65426 65677 252 Locate
petL gene + 66551 66646 96 Locate
petG gene + 66821 66934 114 Locate
trnW-CCA gene − 67053 67126 74 Locate
trnP-UGG gene − 67296 67369 74 Locate
psaJ gene + 67637 67771 135 Locate
rpl33 gene + 68250 68450 201 Locate
rps18 gene + 68625 68930 306 Locate
rpl20 gene − 69165 69551 387 Locate
rps12 gene − 70336 70461 126 Locate
clpP gene − 70603 72531 1929 Locate
psbB gene + 72983 74509 1527 Locate
psbT gene + 74700 74807 108 Locate
psbN gene − 74868 74999 132 Locate
psbH gene + 75103 75324 222 Locate
petB gene + 75449 76813 1365 Locate
petD gene + 76996 78197 1202 Locate
rpoA gene − 78552 79352 801 Locate
rps11 gene − 79424 79840 417 Locate
rpl36 gene − 79942 80055 114 Locate
infA gene − 80150 80383 234 Locate
rps8 gene − 80506 80916 411 Locate
rpl14 gene − 81071 81439 369 Locate
rpl16 gene − 81566 82799 1234 Locate
rps3 gene − 82955 83617 663 Locate
rpl22 gene − 83619 84074 456 Locate
rps19 gene − 84134 84412 279 Locate
rpl2 gene − 84467 85948 1482 Locate
rpl23 gene − 85967 86248 282 Locate
trnI-CAU gene − 86408 86481 74 Locate
ycf2 gene + 86570 93379 6810 Locate
ycf15 gene + 93521 93718 198 Locate
trnL-CAA gene − 93978 94058 81 Locate
ndhB gene − 94601 96812 2212 Locate
rps7 gene − 97087 97554 468 Locate
rps12 gene − 97608 98398 791 Locate
trnV-GAC gene + 99970 100041 72 Locate
rrn16 gene + 100268 101758 1491 Locate
trnI-GAU gene + 102057 103077 1021 Locate
trnA-UGC gene + 103142 104028 887 Locate
rrn23 gene + 104198 107009 2812 Locate
rrn4.5 gene + 107108 107210 103 Locate
rrn5 gene + 107458 107578 121 Locate
trnR-ACG gene + 107813 107886 74 Locate
trnN-GUU gene − 108435 108506 72 Locate
ndhF gene − 109563 111824 2262 Locate
rpl32 gene + 112152 112328 177 Locate
trnL-UAG gene + 112776 112855 80 Locate
ccsA gene + 112944 113918 975 Locate
ndhD gene − 114157 115659 1503 Locate
psaC gene − 115787 116032 246 Locate
ndhE gene − 116288 116593 306 Locate
ndhG gene − 116810 117340 531 Locate
ndhI gene − 117707 118207 501 Locate
ndhA gene − 118288 120409 2122 Locate
ndhH gene − 120411 121622 1212 Locate
rps15 gene − 121689 121961 273 Locate
ycf1 gene − 122155 127791 5637 Locate
trnN-GUU gene + 128010 128081 72 Locate
trnR-ACG gene − 128630 128703 74 Locate
rrn5 gene − 128938 129058 121 Locate
rrn4.5 gene − 129306 129408 103 Locate
rrn23 gene − 129507 132318 2812 Locate
trnA-UGC gene − 132488 133374 887 Locate
trnI-GAU gene − 133439 134459 1021 Locate
ycf68 gene − 134011 134304 294 Locate
rrn16 gene − 134758 136248 1491 Locate
trnV-GAC gene − 136475 136546 72 Locate
rps12 gene + 138118 138908 791 Locate
rps7 gene + 138962 139429 468 Locate
ndhB gene + 139704 141915 2212 Locate
trnL-CAA gene + 142458 142538 81 Locate
ycf15 gene − 142798 142995 198 Locate
ycf2 gene − 143137 149946 6810 Locate
trnI-CAU gene + 150035 150108 74 Locate
rpl23 gene + 150268 150549 282 Locate
rpl2 gene + 150568 152049 1482 Locate
Status Available
Accession PQ075921.1
Length 152,149 bp
GC content 38.3%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources