Coordinate-aware organelle record

Scutellaria stocksii chloroplast genome

Available PQ059230.1 152,209 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	373	1432	1059
trnK-UUU	gene	translation-rna	−	1682	4265	2583
matK	gene	other	−	1972	3499	1527
rps16	gene	ribosomal-protein	−	5164	6323	1159
trnQ-UUG	gene	translation-rna	−	7447	7519	72
psbK	gene	photosystem-ii	+	7843	8029	186
psbI	gene	photosystem-ii	+	8418	8529	111
trnS-GCU	gene	translation-rna	−	8646	8734	88
trnG-UCC	gene	translation-rna	+	9431	10188	757
trnR-UCU	gene	translation-rna	+	10362	10434	72
atpA	gene	atp-synthase	−	10530	12054	1524
atpF	gene	atp-synthase	−	12135	13365	1230
atpH	gene	atp-synthase	−	13725	13971	246
atpI	gene	atp-synthase	−	14958	15702	744
rps2	gene	ribosomal-protein	−	16048	16759	711
rpoC2	gene	rna-polymerase	−	16975	21181	4206
rpoC1	gene	rna-polymerase	−	21335	24177	2842
rpoB	gene	rna-polymerase	−	24203	27416	3213
trnC-GCA	gene	translation-rna	+	28576	28647	71
petN	gene	cytochrome	+	29358	29448	90
psbM	gene	photosystem-ii	−	30501	30606	105
trnD-GUC	gene	translation-rna	−	31131	31205	74
trnY-GUA	gene	translation-rna	−	31318	31402	84
trnE-UUC	gene	translation-rna	−	31461	31534	73
trnT-GGU	gene	translation-rna	+	32109	32181	72
psbD	gene	photosystem-ii	+	33469	34531	1062
psbC	gene	photosystem-ii	+	34478	35900	1422
trnS-UGA	gene	translation-rna	−	36135	36227	92
psbZ	gene	photosystem-ii	+	36542	36731	189
trnG-GCC	gene	translation-rna	+	37009	37080	71
trnfM-CAU	gene	translation-rna	−	37226	37300	74
rps14	gene	ribosomal-protein	−	37454	37757	303
psaB	gene	photosystem-i	−	37885	40090	2205
psaA	gene	photosystem-i	−	40115	42368	2253
ycf3	gene	other	−	43065	44986	1921
trnS-GGA	gene	translation-rna	+	45861	45948	87
rps4	gene	ribosomal-protein	−	46223	46829	606
trnT-UGU	gene	translation-rna	−	47170	47243	73
trnL-UAA	gene	translation-rna	+	47928	48488	560
trnF-GAA	gene	translation-rna	+	48792	48865	73
ndhJ	gene	nad-dehydrogenase	−	49518	49995	477
ndhK	gene	nad-dehydrogenase	−	50103	50781	678
ndhC	gene	nad-dehydrogenase	−	50834	51197	363
trnV-UAC	gene	translation-rna	−	52174	52827	653
trnM-CAU	gene	translation-rna	+	53015	53088	73
atpE	gene	atp-synthase	−	53281	53683	402
atpB	gene	atp-synthase	−	53679	55176	1497
rbcL	gene	other	+	55927	57391	1464
accD	gene	other	+	58117	59596	1479
psaI	gene	photosystem-i	+	60302	60413	111
ycf4	gene	other	+	60846	61401	555
cemA	gene	other	+	62148	62748	600
petA	gene	cytochrome	+	62954	63917	963
psbJ	gene	photosystem-ii	−	64927	65050	123
psbL	gene	photosystem-ii	−	65183	65300	117
psbF	gene	photosystem-ii	−	65323	65443	120
psbE	gene	photosystem-ii	−	65457	65709	252
petL	gene	cytochrome	+	66584	66680	96
petG	gene	cytochrome	+	66855	66969	114
trnW-CCA	gene	translation-rna	−	67087	67161	74
trnP-UGG	gene	translation-rna	−	67330	67404	74
psaJ	gene	photosystem-i	+	67676	67811	135
rpl33	gene	ribosomal-protein	+	68288	68489	201
rps18	gene	ribosomal-protein	+	68663	68969	306
rpl20	gene	ribosomal-protein	−	69203	69590	387
rps12	gene	ribosomal-protein	−	70384	98451	28067
rps12	gene	ribosomal-protein	+	70384	138968	68584
clpP	gene	other	−	70640	72570	1930
psbB	gene	photosystem-ii	+	73028	74555	1527
psbT	gene	photosystem-ii	+	74745	74853	108
psbN	gene	photosystem-ii	−	74913	75045	132
psbH	gene	photosystem-ii	+	75148	75370	222
petB	gene	cytochrome	+	75494	76867	1373
petD	gene	cytochrome	+	77049	78254	1205
rpoA	gene	rna-polymerase	−	78608	79409	801
rps11	gene	ribosomal-protein	−	79480	79897	417
rpl36	gene	ribosomal-protein	−	79998	80112	114
infA	gene	other	−	80206	80440	234
rps8	gene	ribosomal-protein	−	80561	80972	411
rpl14	gene	ribosomal-protein	−	81123	81492	369
rpl16	gene	ribosomal-protein	−	81618	82852	1234
rps3	gene	ribosomal-protein	−	83007	83670	663
rpl22	gene	ribosomal-protein	−	83671	84127	456
rps19	gene	ribosomal-protein	−	84186	84465	279
rpl2	gene	ribosomal-protein	−	84519	86001	1482
rpl23	gene	ribosomal-protein	−	86019	86301	282
trnI-CAU	gene	translation-rna	−	86460	86534	74
ycf2	gene	other	+	86622	93432	6810
ycf15	gene	other	+	93522	93771	249
trnL-CAA	gene	translation-rna	−	94030	94111	81
ndhB	gene	nad-dehydrogenase	−	94653	96811	2158
rps7	gene	ribosomal-protein	−	97139	97607	468
trnV-GAC	gene	translation-rna	+	100023	100095	72
rrn16	gene	ribosomal-rna	+	100321	101812	1491
trnI-GAU	gene	translation-rna	+	102110	103131	1021
trnA-UGC	gene	translation-rna	+	103195	104081	886
rrn23	gene	ribosomal-rna	+	104243	107055	2812
rrn4.5	gene	ribosomal-rna	+	107153	107256	103
rrn5	gene	ribosomal-rna	+	107503	107624	121
trnR-ACG	gene	translation-rna	+	107858	107932	74
trnN-GUU	gene	translation-rna	−	108480	108552	72
ndhF	gene	nad-dehydrogenase	−	109608	111870	2262
rpl32	gene	ribosomal-protein	+	112197	112374	177
trnL-UAG	gene	translation-rna	+	112819	112899	80
ccsA	gene	other	+	112984	113959	975
ndhD	gene	nad-dehydrogenase	−	114216	115746	1530
psaC	gene	photosystem-i	−	115845	116091	246
ndhE	gene	nad-dehydrogenase	−	116346	116652	306
ndhG	gene	nad-dehydrogenase	−	116868	117399	531
ndhI	gene	nad-dehydrogenase	−	117765	118266	501
ndhA	gene	nad-dehydrogenase	−	118346	120468	2122
ndhH	gene	nad-dehydrogenase	−	120469	121681	1212
rps15	gene	ribosomal-protein	−	121751	122024	273
ycf1	gene	other	−	122221	127858	5637
trnN-GUU	gene	translation-rna	+	128076	128148	72
trnR-ACG	gene	translation-rna	−	128696	128770	74
rrn5	gene	ribosomal-rna	−	129004	129125	121
rrn4.5	gene	ribosomal-rna	−	129372	129475	103
rrn23	gene	ribosomal-rna	−	129573	132385	2812
trnA-UGC	gene	translation-rna	−	132547	133433	886
trnI-GAU	gene	translation-rna	−	133497	134518	1021
ycf68	gene	other	−	134069	134363	294
rrn16	gene	ribosomal-rna	−	134816	136307	1491
trnV-GAC	gene	translation-rna	−	136533	136605	72
rps7	gene	ribosomal-protein	+	139021	139489	468
ndhB	gene	nad-dehydrogenase	+	139817	141975	2158
trnL-CAA	gene	translation-rna	+	142517	142598	81
ycf15	gene	other	−	142857	143106	249
ycf2	gene	other	−	143196	150006	6810
trnI-CAU	gene	translation-rna	+	150094	150168	74
rpl23	gene	ribosomal-protein	+	150327	150609	282
rpl2	gene	ribosomal-protein	+	150627	152109	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059230.1DNA · accDPQ059230DNA · atpBPQ059230DNA · matKPQ059230DNA · ndhFPQ059230DNA · psbAPQ059230DNA · rbcLPQ059230DNA · rps12PQ059230DNA · ycf1PQ059230