Coordinate-aware organelle record

Scutellaria strigillosa chloroplast genome

Available MW420956.1 152,578 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	379	1438	1059
trnK-UUU	gene	translation-rna	−	1674	4254	2580
matK	gene	other	−	1965	3501	1536
rps16	gene	ribosomal-protein	−	5161	6330	1169
trnQ-UUC	gene	translation-rna	−	7460	7532	72
psbK	gene	photosystem-ii	+	7856	8042	186
psbI	gene	photosystem-ii	+	8432	8543	111
trnS-GCU	gene	translation-rna	−	8660	8748	88
trnG-CGA	gene	translation-rna	+	9435	10195	760
trnR-UCU	gene	translation-rna	+	10369	10441	72
atpA	gene	atp-synthase	−	10537	12061	1524
atpF	gene	atp-synthase	−	12134	13372	1238
atpH	gene	atp-synthase	−	13740	13986	246
atpI	gene	atp-synthase	−	14976	15720	744
rps2	gene	ribosomal-protein	−	16068	16779	711
rpoC2	gene	rna-polymerase	−	16995	21201	4206
rpoC1	gene	rna-polymerase	−	21355	24192	2837
rpoB	gene	rna-polymerase	−	24218	27431	3213
trnC-GCA	gene	translation-rna	+	28594	28665	71
petN	gene	cytochrome	+	29375	29465	90
psbM	gene	photosystem-ii	−	30492	30597	105
trnD-GUC	gene	translation-rna	−	31122	31196	74
trnY-GUA	gene	translation-rna	−	31309	31393	84
trnE-UUC	gene	translation-rna	−	31452	31525	73
trnT-GGU	gene	translation-rna	+	32107	32179	72
psbD	gene	photosystem-ii	+	33480	34542	1062
psbC	gene	photosystem-ii	+	34489	35911	1422
trnS-UCA	gene	translation-rna	−	36153	36246	93
psbZ	gene	photosystem-ii	+	36565	36754	189
trnG-GCC	gene	translation-rna	+	37025	37096	71
trnfM-CAU	gene	translation-rna	−	37243	37317	74
rps14	gene	ribosomal-protein	−	37466	37769	303
psaB	gene	photosystem-i	−	37896	40101	2205
psaA	gene	photosystem-i	−	40126	42379	2253
ycf3	gene	other	−	43055	44979	1924
trnS-GGA	gene	translation-rna	+	45865	45952	87
rps4	gene	ribosomal-protein	−	46237	46843	606
trnT-UGU	gene	translation-rna	−	47181	47254	73
trnL-UAA	gene	translation-rna	+	47939	48509	570
trnF-GAA	gene	translation-rna	+	48814	48887	73
ndhJ	gene	nad-dehydrogenase	−	49535	50012	477
ndhK	gene	nad-dehydrogenase	−	50119	50797	678
ndhC	gene	nad-dehydrogenase	−	50849	51212	363
trnV-UAC	gene	translation-rna	−	52208	52861	653
trnM-CAU	gene	translation-rna	+	53041	53114	73
atpE	gene	atp-synthase	−	53323	53725	402
atpB	gene	atp-synthase	−	53721	55209	1488
rbcL	gene	other	+	55981	57424	1443
accD	gene	other	+	58134	59601	1467
psaI	gene	photosystem-i	+	60331	60442	111
ycf4	gene	other	+	60875	61430	555
cemA	gene	other	+	62118	62778	660
petA	gene	cytochrome	+	62984	63947	963
pabJ	gene	other	−	64965	65088	123
psbL	gene	photosystem-ii	−	65221	65338	117
psbF	gene	photosystem-ii	−	65361	65481	120
psbE	gene	photosystem-ii	−	65495	65747	252
petL	gene	cytochrome	+	66655	66751	96
petG	gene	cytochrome	+	66925	67039	114
trnW-CCA	gene	translation-rna	−	67157	67231	74
trnP-UGG	gene	translation-rna	−	67400	67474	74
psbJ	gene	photosystem-ii	+	67745	67880	135
rpl33	gene	ribosomal-protein	+	68351	68552	201
rps18	gene	ribosomal-protein	+	68726	69032	306
rpl20	gene	ribosomal-protein	−	69269	69656	387
rps12	gene	ribosomal-protein	−	70444	98581	28137
rps12	gene	ribosomal-protein	+	70444	139345	68901
clpP	gene	other	−	70712	72647	1935
psbB	gene	photosystem-ii	+	73121	74648	1527
psbT	gene	photosystem-ii	+	74839	74941	102
psbN	gene	photosystem-ii	−	75014	75146	132
psbH	gene	photosystem-ii	+	75249	75471	222
petB	gene	cytochrome	+	75595	76961	1366
petD	gene	cytochrome	+	77149	78351	1202
rpoA	gene	rna-polymerase	−	78513	79527	1014
rps11	gene	ribosomal-protein	−	79598	80015	417
rpl36	gene	ribosomal-protein	−	80116	80230	114
infA	gene	other	−	80325	80559	234
rps8	gene	ribosomal-protein	−	80678	81089	411
rpl14	gene	ribosomal-protein	−	81247	81616	369
rpl16	gene	ribosomal-protein	−	81742	82986	1244
rps3	gene	ribosomal-protein	−	83140	83803	663
rpl22	gene	ribosomal-protein	−	83804	84260	456
rps19	gene	ribosomal-protein	−	84319	84598	279
rpl2	gene	ribosomal-protein	−	84652	86135	1483
rpl23	gene	ribosomal-protein	−	86153	86435	282
trnI-CAU	gene	translation-rna	−	86594	86668	74
ycf2	gene	other	+	86756	93566	6810
ycf15	gene	other	+	93707	93905	198
trnL-CAA	gene	translation-rna	−	94160	94241	81
ndhB	gene	nad-dehydrogenase	−	94783	96995	2212
rps7	gene	ribosomal-protein	−	97269	97737	468
trnV-GAC	gene	translation-rna	+	100158	100230	72
rrn16	gene	ribosomal-rna	+	100457	101948	1491
trnI-GAU	gene	translation-rna	+	102246	103266	1020
trnA-UGC	gene	translation-rna	+	103331	104217	886
rrn23	gene	ribosomal-rna	+	104386	107199	2813
rrn4.5	gene	ribosomal-rna	+	107297	107400	103
rrn5	gene	ribosomal-rna	+	107647	107768	121
trnR-ACG	gene	translation-rna	+	108002	108076	74
trnN-GUU	gene	translation-rna	+	108622	108694	72
ndhF	gene	nad-dehydrogenase	−	109763	112004	2241
rpl32	gene	ribosomal-protein	+	112520	112697	177
trnL-UAG	gene	translation-rna	+	113143	113223	80
ccsA	gene	other	+	113319	114294	975
ndhD	gene	nad-dehydrogenase	−	114526	116056	1530
psaC	gene	photosystem-i	−	116147	116393	246
ndhE	gene	nad-dehydrogenase	−	116654	116960	306
ndhG	gene	nad-dehydrogenase	−	117180	117711	531
ndhI	gene	nad-dehydrogenase	−	118074	118575	501
ndhA	gene	nad-dehydrogenase	−	118655	120747	2092
ndhH	gene	nad-dehydrogenase	−	120748	121930	1182
rps15	gene	ribosomal-protein	−	122032	122305	273
ycf1	gene	other	−	122575	128119	5544
trnN-GUU	gene	translation-rna	+	128441	128513	72
trnR-ACG	gene	translation-rna	−	129059	129133	74
rrn5	gene	ribosomal-rna	−	129367	129488	121
rrn4.5	gene	ribosomal-rna	−	129735	129838	103
rrn23	gene	ribosomal-rna	−	129936	132749	2813
trnA-UGC	gene	translation-rna	−	132918	133804	886
trnI-GAU	gene	translation-rna	−	133869	134889	1020
rrn16	gene	ribosomal-rna	−	135187	136678	1491
trnV-GAC	gene	translation-rna	−	136905	136977	72
rps7	gene	ribosomal-protein	+	139398	139866	468
ndhB	gene	nad-dehydrogenase	+	140140	142352	2212
trnL-CAA	gene	translation-rna	+	142894	142975	81
ycf15	gene	other	−	143230	143428	198
ycf2	gene	other	−	143569	150379	6810
trnI-CAU	gene	translation-rna	+	150467	150541	74
rpl23	gene	ribosomal-protein	+	150700	150982	282
rpl2	gene	ribosomal-protein	+	151000	152483	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW420956.1DNA · accDMW420956DNA · atpBMW420956DNA · matKMW420956DNA · ndhFMW420956DNA · psbAMW420956DNA · rbcLMW420956DNA · rps12MW420956DNA · ycf1MW420956