Coordinate-aware organelle record

Scutellaria subcaespitosa chloroplast genome

Available PQ058249.1 152,066 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	9	83	74
psbA	gene	photosystem-ii	−	380	1439	1059
trnK-UUU	gene	translation-rna	−	1680	4262	2582
matK	gene	other	−	1970	3497	1527
rps16	gene	ribosomal-protein	−	5162	6320	1158
trnQ-UUG	gene	translation-rna	−	7467	7539	72
psbK	gene	photosystem-ii	+	7863	8049	186
psbI	gene	photosystem-ii	+	8437	8548	111
trnS-GCU	gene	translation-rna	−	8669	8757	88
trnG-UCC	gene	translation-rna	+	9450	10207	757
trnR-UCU	gene	translation-rna	+	10381	10453	72
atpA	gene	atp-synthase	−	10549	12073	1524
atpF	gene	atp-synthase	−	12155	13384	1229
atpH	gene	atp-synthase	−	13747	13993	246
atpI	gene	atp-synthase	−	14980	15724	744
rps2	gene	ribosomal-protein	−	16068	16905	837
rpoC2	gene	rna-polymerase	−	16992	21198	4206
rpoC1	gene	rna-polymerase	−	21352	24194	2842
rpoB	gene	rna-polymerase	−	24220	27433	3213
trnC-GCA	gene	translation-rna	+	28593	28664	71
petN	gene	cytochrome	+	29380	29470	90
psbM	gene	photosystem-ii	−	30453	30558	105
trnD-GUC	gene	translation-rna	−	31079	31153	74
trnY-GUA	gene	translation-rna	−	31266	31350	84
trnE-UUC	gene	translation-rna	−	31409	31482	73
trnT-GGU	gene	translation-rna	+	32057	32129	72
psbD	gene	photosystem-ii	+	33432	34494	1062
psbC	gene	photosystem-ii	+	34441	35863	1422
trnS-UGA	gene	translation-rna	−	36098	36190	92
psbZ	gene	photosystem-ii	+	36505	36694	189
trnG-GCC	gene	translation-rna	+	36968	37039	71
trnfM-CAU	gene	translation-rna	−	37189	37263	74
rps14	gene	ribosomal-protein	−	37417	37720	303
psaB	gene	photosystem-i	−	37849	40054	2205
psaA	gene	photosystem-i	−	40079	42332	2253
ycf3	gene	other	−	43046	44970	1924
trnS-GGA	gene	translation-rna	+	45853	45940	87
rps4	gene	ribosomal-protein	−	46215	46821	606
trnT-UGU	gene	translation-rna	−	47162	47235	73
trnL-UAA	gene	translation-rna	+	47908	48468	560
trnF-GAA	gene	translation-rna	+	48772	48845	73
ndhJ	gene	nad-dehydrogenase	−	49485	49962	477
ndhK	gene	nad-dehydrogenase	−	50070	50832	762
ndhC	gene	nad-dehydrogenase	−	50801	51164	363
trnV-UAC	gene	translation-rna	−	52140	52793	653
trnM-CAU	gene	translation-rna	+	52981	53054	73
atpE	gene	atp-synthase	−	53247	53649	402
atpB	gene	atp-synthase	−	53645	55142	1497
rbcL	gene	other	+	55893	57357	1464
accD	gene	other	+	58070	59549	1479
psaI	gene	photosystem-i	+	60255	60366	111
ycf4	gene	other	+	60799	61354	555
cemA	gene	other	+	62102	62702	600
petA	gene	cytochrome	+	62908	63871	963
psbJ	gene	photosystem-ii	−	64877	65000	123
psbL	gene	photosystem-ii	−	65133	65250	117
psbF	gene	photosystem-ii	−	65273	65393	120
psbE	gene	photosystem-ii	−	65407	65659	252
petL	gene	cytochrome	+	66534	66630	96
petG	gene	cytochrome	+	66805	66919	114
trnW-CCA	gene	translation-rna	−	67037	67111	74
trnP-UGG	gene	translation-rna	−	67280	67354	74
psaJ	gene	photosystem-i	+	67562	67760	198
rpl33	gene	ribosomal-protein	+	68236	68437	201
rps18	gene	ribosomal-protein	+	68611	68917	306
rpl20	gene	ribosomal-protein	−	69101	69488	387
rps12	gene	ribosomal-protein	−	70270	98328	28058
rps12	gene	ribosomal-protein	+	70270	138825	68555
clpP	gene	other	−	70538	72468	1930
psbB	gene	photosystem-ii	+	72919	74446	1527
psbT	gene	photosystem-ii	+	74636	74744	108
psbN	gene	photosystem-ii	−	74804	74936	132
psbH	gene	photosystem-ii	+	75039	75261	222
petB	gene	cytochrome	+	75385	76758	1373
petD	gene	cytochrome	+	76940	78146	1206
rpoA	gene	rna-polymerase	−	78500	79301	801
rps11	gene	ribosomal-protein	−	79372	79789	417
rpl36	gene	ribosomal-protein	−	79890	80004	114
infA	gene	other	−	80098	80332	234
rps8	gene	ribosomal-protein	−	80454	80865	411
rpl14	gene	ribosomal-protein	−	81016	81385	369
rpl16	gene	ribosomal-protein	−	81511	82729	1218
rps3	gene	ribosomal-protein	−	82884	83547	663
rpl22	gene	ribosomal-protein	−	83548	84004	456
rps19	gene	ribosomal-protein	−	84063	84342	279
rpl2	gene	ribosomal-protein	−	84396	85878	1482
rpl23	gene	ribosomal-protein	−	85896	86178	282
trnI-CAU	gene	translation-rna	−	86337	86411	74
ycf2	gene	other	+	86499	93309	6810
ycf15	gene	other	+	93450	93648	198
trnL-CAA	gene	translation-rna	−	93907	93988	81
ndhB	gene	nad-dehydrogenase	−	94530	96742	2212
rps7	gene	ribosomal-protein	−	97016	97484	468
trnV-GAC	gene	translation-rna	+	99899	99971	72
rrn16	gene	ribosomal-rna	+	100197	101688	1491
trnI-GAU	gene	translation-rna	+	101986	103007	1021
trnA-UGC	gene	translation-rna	+	103071	103958	887
rrn23	gene	ribosomal-rna	+	104120	106932	2812
rrn4.5	gene	ribosomal-rna	+	107030	107133	103
rrn5	gene	ribosomal-rna	+	107380	107501	121
trnR-ACG	gene	translation-rna	+	107735	107809	74
trnN-GUU	gene	translation-rna	−	108357	108429	72
ndhF	gene	nad-dehydrogenase	−	109482	111747	2265
rpl32	gene	ribosomal-protein	+	112074	112251	177
trnL-UAG	gene	translation-rna	+	112701	112781	80
ccsA	gene	other	+	112886	113861	975
ndhD	gene	nad-dehydrogenase	−	114099	115602	1503
psaC	gene	photosystem-i	−	115729	115975	246
ndhE	gene	nad-dehydrogenase	−	116226	116532	306
ndhG	gene	nad-dehydrogenase	−	116748	117279	531
ndhI	gene	nad-dehydrogenase	−	117644	118145	501
ndhA	gene	nad-dehydrogenase	−	118220	120333	2113
ndhH	gene	nad-dehydrogenase	−	120334	121516	1182
rps15	gene	ribosomal-protein	−	121612	121885	273
ycf1	gene	other	−	122078	127715	5637
trnN-GUU	gene	translation-rna	+	127933	128005	72
trnR-ACG	gene	translation-rna	−	128553	128627	74
rrn5	gene	ribosomal-rna	−	128861	128982	121
rrn4.5	gene	ribosomal-rna	−	129229	129332	103
rrn23	gene	ribosomal-rna	−	129430	132242	2812
trnA-UGC	gene	translation-rna	−	132404	133291	887
trnI-GAU	gene	translation-rna	−	133355	134376	1021
ycf68	gene	other	−	133927	134221	294
rrn16	gene	ribosomal-rna	−	134674	136165	1491
trnV-GAC	gene	translation-rna	−	136391	136463	72
rps7	gene	ribosomal-protein	+	138878	139346	468
ndhB	gene	nad-dehydrogenase	+	139620	141832	2212
trnL-CAA	gene	translation-rna	+	142374	142455	81
ycf15	gene	other	−	142714	142912	198
ycf2	gene	other	−	143053	149863	6810
trnI-CAU	gene	translation-rna	+	149951	150025	74
rpl23	gene	ribosomal-protein	+	150184	150466	282
rpl2	gene	ribosomal-protein	+	150484	151966	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ058249.1DNA · accDPQ058249DNA · atpBPQ058249DNA · matKPQ058249DNA · ndhFPQ058249DNA · psbAPQ058249DNA · rbcLPQ058249DNA · rps12PQ058249DNA · ycf1PQ058249