Scutellaria supina chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PZ130069.1 · 4–77 bp · −
psbA · PZ130069.1 · 374–1,432 bp · −
trnK-UUU · PZ130069.1 · 1,674–4,256 bp · −
matK · PZ130069.1 · 1,964–3,490 bp · −
rps16 · PZ130069.1 · 5,158–6,318 bp · −
trnQ-UUG · PZ130069.1 · 7,064–7,135 bp · −
trnS-GCU · PZ130069.1 · 8,264–8,351 bp · −
atpA · PZ130069.1 · 10,151–11,674 bp · −
atpF · PZ130069.1 · 11,756–12,985 bp · −
atpH · PZ130069.1 · 13,346–13,591 bp · −
atpI · PZ130069.1 · 14,579–15,322 bp · −
rps2 · PZ130069.1 · 15,668–16,378 bp · −
rpoC2 · PZ130069.1 · 16,593–20,798 bp · −
rpoC1 · PZ130069.1 · 20,953–23,775 bp · −
rpoB · PZ130069.1 · 23,802–27,014 bp · −
psbM · PZ130069.1 · 30,067–30,171 bp · −
trnD-GUC · PZ130069.1 · 30,697–30,770 bp · −
trnY-GUA · PZ130069.1 · 30,884–30,967 bp · −
trnE-UUC · PZ130069.1 · 31,027–31,099 bp · −
trnS-UGA · PZ130069.1 · 35,717–35,808 bp · −
trnfM-CAU · PZ130069.1 · 36,807–36,880 bp · −
rps14 · PZ130069.1 · 37,030–37,332 bp · −
psaB · PZ130069.1 · 37,462–39,666 bp · −
psaA · PZ130069.1 · 39,692–41,944 bp · −
ycf3 · PZ130069.1 · 42,637–44,559 bp · −
rps4 · PZ130069.1 · 45,804–46,409 bp · −
trnT-UGU · PZ130069.1 · 46,749–46,821 bp · −
ndhJ · PZ130069.1 · 49,082–49,558 bp · −
ndhK · PZ130069.1 · 49,667–50,344 bp · −
ndhC · PZ130069.1 · 50,398–50,760 bp · −
trnV-UAC · PZ130069.1 · 51,744–52,396 bp · −
atpE · PZ130069.1 · 52,851–53,252 bp · −
atpB · PZ130069.1 · 53,249–54,745 bp · −
psbJ · PZ130069.1 · 64,482–64,604 bp · −
psbL · PZ130069.1 · 64,738–64,959 bp · −
psbF · PZ130069.1 · 64,878–64,997 bp · −
psbE · PZ130069.1 · 65,012–65,263 bp · −
trnW-CCA · PZ130069.1 · 66,642–66,715 bp · −
trnP-UGG · PZ130069.1 · 66,885–66,958 bp · −
rpl20 · PZ130069.1 · 68,754–69,140 bp · −
rps12 · PZ130069.1 · 69,935–70,048 bp · −
rps12 · PZ130069.1 · 97,195–97,985 bp · −
clpP · PZ130069.1 · 70,190–72,118 bp · −
psbN · PZ130069.1 · 74,456–74,587 bp · −
rpoA · PZ130069.1 · 78,149–78,949 bp · −
rps11 · PZ130069.1 · 79,021–79,437 bp · −
rpl36 · PZ130069.1 · 79,539–79,652 bp · −
infA · PZ130069.1 · 79,747–79,980 bp · −
rps8 · PZ130069.1 · 80,104–80,514 bp · −
rpl14 · PZ130069.1 · 80,667–81,035 bp · −
rpl16 · PZ130069.1 · 81,162–82,395 bp · −
rps3 · PZ130069.1 · 82,551–83,213 bp · −
rpl22 · PZ130069.1 · 83,215–83,670 bp · −
rps19 · PZ130069.1 · 83,730–84,008 bp · −
rpl2 · PZ130069.1 · 84,063–85,544 bp · −
rpl23 · PZ130069.1 · 85,563–85,844 bp · −
trnI-CAU · PZ130069.1 · 86,004–86,077 bp · −
trnL-CAA · PZ130069.1 · 93,565–93,645 bp · −
ndhB · PZ130069.1 · 94,188–96,345 bp · −
rps7 · PZ130069.1 · 96,674–97,141 bp · −
trnN-GUU · PZ130069.1 · 108,026–108,097 bp · −
ndhF · PZ130069.1 · 109,154–111,415 bp · −
ndhD · PZ130069.1 · 113,795–115,324 bp · −
psaC · PZ130069.1 · 115,425–115,670 bp · −
ndhE · PZ130069.1 · 115,926–116,231 bp · −
ndhG · PZ130069.1 · 116,448–116,978 bp · −
ndhI · PZ130069.1 · 117,345–117,845 bp · −
ndhA · PZ130069.1 · 117,931–120,052 bp · −
ndhH · PZ130069.1 · 120,054–121,265 bp · −
rps15 · PZ130069.1 · 121,332–121,604 bp · −
ycf1 · PZ130069.1 · 121,800–127,436 bp · −
trnR-ACG · PZ130069.1 · 128,275–128,348 bp · −
rrn5 · PZ130069.1 · 128,583–128,703 bp · −
rrn4.5 · PZ130069.1 · 128,951–129,053 bp · −
rrn23 · PZ130069.1 · 129,152–131,963 bp · −
trnA-UGC · PZ130069.1 · 132,133–133,023 bp · −
trnI-GAU · PZ130069.1 · 133,088–134,108 bp · −
ycf68 · PZ130069.1 · 133,660–133,953 bp · −
rrn16 · PZ130069.1 · 134,407–135,897 bp · −
trnV-GAC · PZ130069.1 · 136,124–136,195 bp · −
ycf15 · PZ130069.1 · 142,447–142,695 bp · −
ycf2 · PZ130069.1 · 142,786–149,586 bp · −
psbK · PZ130069.1 · 7,460–7,645 bp · +
psbI · PZ130069.1 · 8,035–8,145 bp · +
trnG-UCC · PZ130069.1 · 9,052–9,808 bp · +
trnR-UCU · PZ130069.1 · 9,983–10,054 bp · +
trnC-GCA · PZ130069.1 · 28,175–28,245 bp · +
petN · PZ130069.1 · 28,961–29,050 bp · +
trnT-GGU · PZ130069.1 · 31,675–31,746 bp · +
psbD · PZ130069.1 · 33,051–34,112 bp · +
psbC · PZ130069.1 · 34,060–35,481 bp · +
psbZ · PZ130069.1 · 36,124–36,312 bp · +
trnG-GCC · PZ130069.1 · 36,589–36,659 bp · +
trnS-GGA · PZ130069.1 · 45,442–45,528 bp · +
trnL-UAA · PZ130069.1 · 47,502–48,061 bp · +
trnF-GAA · PZ130069.1 · 48,362–48,434 bp · +
trnM-CAU · PZ130069.1 · 52,585–52,657 bp · +
rbcL · PZ130069.1 · 55,496–56,959 bp · +
accD · PZ130069.1 · 57,673–59,151 bp · +
psaI · PZ130069.1 · 59,858–59,968 bp · +
ycf4 · PZ130069.1 · 60,402–60,956 bp · +
cemA · PZ130069.1 · 61,705–62,304 bp · +
petA · PZ130069.1 · 62,511–63,473 bp · +
petL · PZ130069.1 · 66,140–66,235 bp · +
petG · PZ130069.1 · 66,410–66,523 bp · +
psaJ · PZ130069.1 · 67,230–67,364 bp · +
rpl33 · PZ130069.1 · 67,839–68,039 bp · +
rps18 · PZ130069.1 · 68,214–68,519 bp · +
rps12 · PZ130069.1 · 137,767–138,557 bp · +
psbB · PZ130069.1 · 72,570–74,096 bp · +
psbT · PZ130069.1 · 74,288–74,395 bp · +
psbH · PZ130069.1 · 74,691–74,912 bp · +
petB · PZ130069.1 · 75,037–76,405 bp · +
petD · PZ130069.1 · 76,588–77,794 bp · +
ycf2 · PZ130069.1 · 86,166–92,966 bp · +
ycf15 · PZ130069.1 · 93,057–93,305 bp · +
trnV-GAC · PZ130069.1 · 99,557–99,628 bp · +
rrn16 · PZ130069.1 · 99,855–101,345 bp · +
trnI-GAU · PZ130069.1 · 101,644–102,664 bp · +
trnA-UGC · PZ130069.1 · 102,729–103,619 bp · +
rrn23 · PZ130069.1 · 103,789–106,600 bp · +
rrn4.5 · PZ130069.1 · 106,699–106,801 bp · +
rrn5 · PZ130069.1 · 107,049–107,169 bp · +
trnR-ACG · PZ130069.1 · 107,404–107,477 bp · +
rpl32 · PZ130069.1 · 111,743–111,919 bp · +
trnL-UAG · PZ130069.1 · 112,366–112,445 bp · +
ccsA · PZ130069.1 · 112,547–113,521 bp · +
trnN-GUU · PZ130069.1 · 127,655–127,726 bp · +
rps7 · PZ130069.1 · 138,611–139,078 bp · +
ndhB · PZ130069.1 · 139,407–141,564 bp · +
trnL-CAA · PZ130069.1 · 142,107–142,187 bp · +
trnI-CAU · PZ130069.1 · 149,675–149,748 bp · +
rpl23 · PZ130069.1 · 149,908–150,189 bp · +
rpl2 · PZ130069.1 · 150,208–151,689 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Scutellaria supina
ANNOTATED PLASTOME
PZ130069.1
151,789 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37947 75894 113842 151789 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU ycf68 rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 4 77 74 Locate
psbA gene − 374 1432 1059 Locate
trnK-UUU gene − 1674 4256 2583 Locate
matK gene − 1964 3490 1527 Locate
rps16 gene − 5158 6318 1161 Locate
trnQ-UUG gene − 7064 7135 72 Locate
psbK gene + 7460 7645 186 Locate
psbI gene + 8035 8145 111 Locate
trnS-GCU gene − 8264 8351 88 Locate
trnG-UCC gene + 9052 9808 757 Locate
trnR-UCU gene + 9983 10054 72 Locate
atpA gene − 10151 11674 1524 Locate
atpF gene − 11756 12985 1230 Locate
atpH gene − 13346 13591 246 Locate
atpI gene − 14579 15322 744 Locate
rps2 gene − 15668 16378 711 Locate
rpoC2 gene − 16593 20798 4206 Locate
rpoC1 gene − 20953 23775 2823 Locate
rpoB gene − 23802 27014 3213 Locate
trnC-GCA gene + 28175 28245 71 Locate
petN gene + 28961 29050 90 Locate
psbM gene − 30067 30171 105 Locate
trnD-GUC gene − 30697 30770 74 Locate
trnY-GUA gene − 30884 30967 84 Locate
trnE-UUC gene − 31027 31099 73 Locate
trnT-GGU gene + 31675 31746 72 Locate
psbD gene + 33051 34112 1062 Locate
psbC gene + 34060 35481 1422 Locate
trnS-UGA gene − 35717 35808 92 Locate
psbZ gene + 36124 36312 189 Locate
trnG-GCC gene + 36589 36659 71 Locate
trnfM-CAU gene − 36807 36880 74 Locate
rps14 gene − 37030 37332 303 Locate
psaB gene − 37462 39666 2205 Locate
psaA gene − 39692 41944 2253 Locate
ycf3 gene − 42637 44559 1923 Locate
trnS-GGA gene + 45442 45528 87 Locate
rps4 gene − 45804 46409 606 Locate
trnT-UGU gene − 46749 46821 73 Locate
trnL-UAA gene + 47502 48061 560 Locate
trnF-GAA gene + 48362 48434 73 Locate
ndhJ gene − 49082 49558 477 Locate
ndhK gene − 49667 50344 678 Locate
ndhC gene − 50398 50760 363 Locate
trnV-UAC gene − 51744 52396 653 Locate
trnM-CAU gene + 52585 52657 73 Locate
atpE gene − 52851 53252 402 Locate
atpB gene − 53249 54745 1497 Locate
rbcL gene + 55496 56959 1464 Locate
accD gene + 57673 59151 1479 Locate
psaI gene + 59858 59968 111 Locate
ycf4 gene + 60402 60956 555 Locate
cemA gene + 61705 62304 600 Locate
petA gene + 62511 63473 963 Locate
psbJ gene − 64482 64604 123 Locate
psbL gene − 64738 64959 222 Locate
psbF gene − 64878 64997 120 Locate
psbE gene − 65012 65263 252 Locate
petL gene + 66140 66235 96 Locate
petG gene + 66410 66523 114 Locate
trnW-CCA gene − 66642 66715 74 Locate
trnP-UGG gene − 66885 66958 74 Locate
psaJ gene + 67230 67364 135 Locate
rpl33 gene + 67839 68039 201 Locate
rps18 gene + 68214 68519 306 Locate
rpl20 gene − 68754 69140 387 Locate
rps12 gene − 69935 70048 114 Locate
clpP gene − 70190 72118 1929 Locate
psbB gene + 72570 74096 1527 Locate
psbT gene + 74288 74395 108 Locate
psbN gene − 74456 74587 132 Locate
psbH gene + 74691 74912 222 Locate
petB gene + 75037 76405 1369 Locate
petD gene + 76588 77794 1207 Locate
rpoA gene − 78149 78949 801 Locate
rps11 gene − 79021 79437 417 Locate
rpl36 gene − 79539 79652 114 Locate
infA gene − 79747 79980 234 Locate
rps8 gene − 80104 80514 411 Locate
rpl14 gene − 80667 81035 369 Locate
rpl16 gene − 81162 82395 1234 Locate
rps3 gene − 82551 83213 663 Locate
rpl22 gene − 83215 83670 456 Locate
rps19 gene − 83730 84008 279 Locate
rpl2 gene − 84063 85544 1482 Locate
rpl23 gene − 85563 85844 282 Locate
trnI-CAU gene − 86004 86077 74 Locate
ycf2 gene + 86166 92966 6801 Locate
ycf15 gene + 93057 93305 249 Locate
trnL-CAA gene − 93565 93645 81 Locate
ndhB gene − 94188 96345 2158 Locate
rps7 gene − 96674 97141 468 Locate
rps12 gene − 97195 97985 791 Locate
trnV-GAC gene + 99557 99628 72 Locate
rrn16 gene + 99855 101345 1491 Locate
trnI-GAU gene + 101644 102664 1021 Locate
trnA-UGC gene + 102729 103619 891 Locate
rrn23 gene + 103789 106600 2812 Locate
rrn4.5 gene + 106699 106801 103 Locate
rrn5 gene + 107049 107169 121 Locate
trnR-ACG gene + 107404 107477 74 Locate
trnN-GUU gene − 108026 108097 72 Locate
ndhF gene − 109154 111415 2262 Locate
rpl32 gene + 111743 111919 177 Locate
trnL-UAG gene + 112366 112445 80 Locate
ccsA gene + 112547 113521 975 Locate
ndhD gene − 113795 115324 1530 Locate
psaC gene − 115425 115670 246 Locate
ndhE gene − 115926 116231 306 Locate
ndhG gene − 116448 116978 531 Locate
ndhI gene − 117345 117845 501 Locate
ndhA gene − 117931 120052 2122 Locate
ndhH gene − 120054 121265 1212 Locate
rps15 gene − 121332 121604 273 Locate
ycf1 gene − 121800 127436 5637 Locate
trnN-GUU gene + 127655 127726 72 Locate
trnR-ACG gene − 128275 128348 74 Locate
rrn5 gene − 128583 128703 121 Locate
rrn4.5 gene − 128951 129053 103 Locate
rrn23 gene − 129152 131963 2812 Locate
trnA-UGC gene − 132133 133023 891 Locate
trnI-GAU gene − 133088 134108 1021 Locate
ycf68 gene − 133660 133953 294 Locate
rrn16 gene − 134407 135897 1491 Locate
trnV-GAC gene − 136124 136195 72 Locate
rps12 gene + 137767 138557 791 Locate
rps7 gene + 138611 139078 468 Locate
ndhB gene + 139407 141564 2158 Locate
trnL-CAA gene + 142107 142187 81 Locate
ycf15 gene − 142447 142695 249 Locate
ycf2 gene − 142786 149586 6801 Locate
trnI-CAU gene + 149675 149748 74 Locate
rpl23 gene + 149908 150189 282 Locate
rpl2 gene + 150208 151689 1482 Locate
Status Available
Accession PZ130069.1
Length 151,789 bp
GC content 38.3%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources