Coordinate-aware organelle record

Scutellaria tashiroi chloroplast genome

Available PQ059348.1 152,071 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	374	1433	1059
trnK-UUU	gene	translation-rna	−	1674	4263	2589
matK	gene	other	−	1969	3505	1536
rps16	gene	ribosomal-protein	−	5135	6305	1170
trnQ-UUG	gene	translation-rna	−	7334	7406	72
psbK	gene	photosystem-ii	+	7730	7916	186
psbI	gene	photosystem-ii	+	8307	8418	111
trnS-GCU	gene	translation-rna	−	8538	8626	88
trnG-UCC	gene	translation-rna	+	9310	10071	761
trnR-UCU	gene	translation-rna	+	10241	10313	72
atpA	gene	atp-synthase	−	10409	11933	1524
atpF	gene	atp-synthase	−	12015	13243	1228
atpH	gene	atp-synthase	−	13599	13845	246
atpI	gene	atp-synthase	−	14832	15576	744
rps2	gene	ribosomal-protein	−	15924	16635	711
rpoC2	gene	rna-polymerase	−	16851	21057	4206
rpoC1	gene	rna-polymerase	−	21211	24041	2830
rpoB	gene	rna-polymerase	−	24067	27280	3213
trnC-GCA	gene	translation-rna	+	28438	28509	71
petN	gene	cytochrome	+	29214	29304	90
psbM	gene	photosystem-ii	−	30387	30492	105
trnD-GUC	gene	translation-rna	−	31018	31092	74
trnY-GUA	gene	translation-rna	−	31205	31289	84
trnE-UUC	gene	translation-rna	−	31348	31421	73
trnT-GGU	gene	translation-rna	+	31900	31972	72
psbD	gene	photosystem-ii	+	33279	34341	1062
psbC	gene	photosystem-ii	+	34288	35710	1422
trnS-UGA	gene	translation-rna	−	35945	36037	92
psbZ	gene	photosystem-ii	+	36356	36545	189
trnG-GCC	gene	translation-rna	+	36816	36887	71
trnfM-CAU	gene	translation-rna	−	37041	37115	74
rps14	gene	ribosomal-protein	−	37264	37567	303
psaB	gene	photosystem-i	−	37694	39899	2205
psaA	gene	photosystem-i	−	39924	42177	2253
ycf3	gene	other	−	42844	44766	1922
trnS-GGA	gene	translation-rna	+	45653	45740	87
rps4	gene	ribosomal-protein	−	46025	46631	606
trnT-UGU	gene	translation-rna	−	46971	47044	73
trnL-UAA	gene	translation-rna	+	47728	48289	561
trnF-GAA	gene	translation-rna	+	48595	48668	73
ndhJ	gene	nad-dehydrogenase	−	49316	49793	477
ndhK	gene	nad-dehydrogenase	−	49900	50578	678
ndhC	gene	nad-dehydrogenase	−	50630	50993	363
trnV-UAC	gene	translation-rna	−	51848	52501	653
trnM-CAU	gene	translation-rna	+	52681	52754	73
atpE	gene	atp-synthase	−	52969	53371	402
atpB	gene	atp-synthase	−	53367	54855	1488
rbcL	gene	other	+	55607	57071	1464
accD	gene	other	+	57809	59276	1467
psaI	gene	photosystem-i	+	59850	59961	111
ycf4	gene	other	+	60386	60941	555
cemA	gene	other	+	61678	62278	600
petA	gene	cytochrome	+	62484	63447	963
psbJ	gene	photosystem-ii	−	64481	64604	123
psbL	gene	photosystem-ii	−	64737	64854	117
psbF	gene	photosystem-ii	−	64877	64997	120
psbE	gene	photosystem-ii	−	65011	65263	252
petL	gene	cytochrome	+	66171	66267	96
petG	gene	cytochrome	+	66442	66556	114
trnW-CCA	gene	translation-rna	−	66674	66748	74
trnP-UGG	gene	translation-rna	−	66917	66991	74
psaJ	gene	photosystem-i	+	67263	67398	135
rpl33	gene	ribosomal-protein	+	67871	68072	201
rps18	gene	ribosomal-protein	+	68246	68552	306
rpl20	gene	ribosomal-protein	−	68788	69175	387
rps12	gene	ribosomal-protein	−	69975	98093	28118
rps12	gene	ribosomal-protein	+	69975	138838	68863
clpP	gene	other	−	70231	72164	1933
psbB	gene	photosystem-ii	+	72640	74167	1527
psbT	gene	photosystem-ii	+	74358	74460	102
psbN	gene	photosystem-ii	−	74533	74665	132
psbH	gene	photosystem-ii	+	74768	74990	222
petB	gene	cytochrome	+	75114	76482	1368
petD	gene	cytochrome	+	76670	77872	1202
rpoA	gene	rna-polymerase	−	78034	79048	1014
rps11	gene	ribosomal-protein	−	79119	79536	417
rpl36	gene	ribosomal-protein	−	79637	79751	114
infA	gene	other	−	79846	80080	234
rps8	gene	ribosomal-protein	−	80200	80611	411
rpl14	gene	ribosomal-protein	−	80780	81149	369
rpl16	gene	ribosomal-protein	−	81275	82498	1223
rps3	gene	ribosomal-protein	−	82652	83315	663
rpl22	gene	ribosomal-protein	−	83316	83772	456
rps19	gene	ribosomal-protein	−	83831	84110	279
rpl2	gene	ribosomal-protein	−	84164	85647	1483
rpl23	gene	ribosomal-protein	−	85665	85947	282
trnI-CAU	gene	translation-rna	−	86106	86180	74
ycf2	gene	other	+	86268	93078	6810
ycf15	gene	other	+	93168	93417	249
trnL-CAA	gene	translation-rna	−	93672	93753	81
ndhB	gene	nad-dehydrogenase	−	94295	96507	2212
rps7	gene	ribosomal-protein	−	96781	97249	468
trnV-GAC	gene	translation-rna	+	99662	99734	72
rrn16	gene	ribosomal-rna	+	99961	101452	1491
trnI-GAU	gene	translation-rna	+	101750	102771	1021
trnA-UGC	gene	translation-rna	+	102835	103718	883
rrn23	gene	ribosomal-rna	+	103887	106700	2813
rrn4.5	gene	ribosomal-rna	+	106798	106901	103
rrn5	gene	ribosomal-rna	+	107148	107269	121
trnR-ACG	gene	translation-rna	+	107503	107577	74
trnN-GUU	gene	translation-rna	−	108123	108195	72
ndhF	gene	nad-dehydrogenase	−	109271	111512	2241
rpl32	gene	ribosomal-protein	+	112032	112209	177
trnL-UAG	gene	translation-rna	+	112654	112734	80
ccsA	gene	other	+	112830	113805	975
ndhD	gene	nad-dehydrogenase	−	114037	115561	1524
psaC	gene	photosystem-i	−	115659	115905	246
ndhE	gene	nad-dehydrogenase	−	116161	116467	306
ndhG	gene	nad-dehydrogenase	−	116697	117228	531
ndhI	gene	nad-dehydrogenase	−	117592	118093	501
ndhA	gene	nad-dehydrogenase	−	118173	120266	2093
ndhH	gene	nad-dehydrogenase	−	120267	121479	1212
rps15	gene	ribosomal-protein	−	121551	121884	333
ycf1	gene	other	−	122090	127727	5637
trnN-GUU	gene	translation-rna	+	127945	128017	72
trnR-ACG	gene	translation-rna	−	128563	128637	74
rrn5	gene	ribosomal-rna	−	128871	128992	121
rrn4.5	gene	ribosomal-rna	−	129239	129342	103
rrn23	gene	ribosomal-rna	−	129440	132253	2813
trnA-UGC	gene	translation-rna	−	132422	133305	883
trnI-GAU	gene	translation-rna	−	133369	134390	1021
ycf68	gene	other	−	133995	134235	240
rrn16	gene	ribosomal-rna	−	134688	136179	1491
trnV-GAC	gene	translation-rna	−	136406	136478	72
rps7	gene	ribosomal-protein	+	138891	139359	468
ndhB	gene	nad-dehydrogenase	+	139633	141845	2212
trnL-CAA	gene	translation-rna	+	142387	142468	81
ycf15	gene	other	−	142723	142972	249
ycf2	gene	other	−	143062	149872	6810
trnI-CAU	gene	translation-rna	+	149960	150034	74
rpl23	gene	ribosomal-protein	+	150193	150475	282
rpl2	gene	ribosomal-protein	+	150493	151976	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059348.1DNA · accDPQ059348DNA · atpBPQ059348DNA · matKPQ059348DNA · ndhFPQ059348DNA · psbAPQ059348DNA · rbcLPQ059348DNA · rps12PQ059348DNA · ycf1PQ059348