Scutellaria tayloriana chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PQ059349.1 · 3–76 bp · −
psbA · PQ059349.1 · 366–1,424 bp · −
trnK-UUU · PQ059349.1 · 1,658–4,246 bp · −
matK · PQ059349.1 · 1,953–3,488 bp · −
rps16 · PQ059349.1 · 5,119–6,296 bp · −
trnQ-UUG · PQ059349.1 · 7,317–7,388 bp · −
trnS-GCU · PQ059349.1 · 8,519–8,606 bp · −
atpA · PQ059349.1 · 10,378–11,901 bp · −
atpF · PQ059349.1 · 11,984–13,211 bp · −
atpH · PQ059349.1 · 13,567–13,812 bp · −
atpI · PQ059349.1 · 14,808–15,551 bp · −
rps2 · PQ059349.1 · 15,900–16,610 bp · −
rpoC2 · PQ059349.1 · 16,827–21,032 bp · −
rpoC1 · PQ059349.1 · 21,187–24,016 bp · −
rpoB · PQ059349.1 · 24,043–27,255 bp · −
psbM · PQ059349.1 · 30,289–30,393 bp · −
trnD-GUC · PQ059349.1 · 30,920–30,993 bp · −
trnY-GUA · PQ059349.1 · 31,107–31,190 bp · −
trnE-UUC · PQ059349.1 · 31,250–31,322 bp · −
trnS-UGA · PQ059349.1 · 35,941–36,032 bp · −
trnfM-CAU · PQ059349.1 · 37,035–37,108 bp · −
rps14 · PQ059349.1 · 37,258–37,560 bp · −
psaB · PQ059349.1 · 37,688–39,892 bp · −
psaA · PQ059349.1 · 39,918–42,170 bp · −
ycf3 · PQ059349.1 · 42,834–44,750 bp · −
rps4 · PQ059349.1 · 46,007–46,612 bp · −
trnT-UGU · PQ059349.1 · 46,953–47,025 bp · −
ndhJ · PQ059349.1 · 49,307–49,783 bp · −
ndhK · PQ059349.1 · 49,891–50,568 bp · −
ndhC · PQ059349.1 · 50,621–50,983 bp · −
trnV-UAC · PQ059349.1 · 51,828–52,480 bp · −
atpE · PQ059349.1 · 52,949–53,350 bp · −
atpB · PQ059349.1 · 53,347–54,834 bp · −
psbJ · PQ059349.1 · 64,432–64,554 bp · −
psbL · PQ059349.1 · 64,688–64,804 bp · −
psbF · PQ059349.1 · 64,828–64,947 bp · −
psbE · PQ059349.1 · 64,962–65,213 bp · −
trnW-CCA · PQ059349.1 · 66,625–66,698 bp · −
trnP-UGG · PQ059349.1 · 66,868–66,941 bp · −
rpl20 · PQ059349.1 · 68,739–69,125 bp · −
rps12 · PQ059349.1 · 69,914–70,039 bp · −
rps12 · PQ059349.1 · 97,191–97,981 bp · −
clpP · PQ059349.1 · 70,182–72,123 bp · −
psbN · PQ059349.1 · 74,473–74,604 bp · −
rpoA · PQ059349.1 · 78,133–78,933 bp · −
rps11 · PQ059349.1 · 79,005–79,421 bp · −
rpl36 · PQ059349.1 · 79,523–79,636 bp · −
infA · PQ059349.1 · 79,732–79,965 bp · −
rps8 · PQ059349.1 · 80,085–80,495 bp · −
rpl14 · PQ059349.1 · 80,665–81,033 bp · −
rpl16 · PQ059349.1 · 81,160–82,386 bp · −
rps3 · PQ059349.1 · 82,541–83,203 bp · −
rpl22 · PQ059349.1 · 83,205–83,660 bp · −
rps19 · PQ059349.1 · 83,720–83,998 bp · −
rpl2 · PQ059349.1 · 84,053–85,535 bp · −
rpl23 · PQ059349.1 · 85,554–85,835 bp · −
trnI-CAU · PQ059349.1 · 85,995–86,068 bp · −
trnL-CAA · PQ059349.1 · 93,561–93,641 bp · −
ndhB · PQ059349.1 · 94,184–96,395 bp · −
rps7 · PQ059349.1 · 96,670–97,137 bp · −
trnN-GUU · PQ059349.1 · 108,021–108,092 bp · −
ndhF · PQ059349.1 · 109,169–111,409 bp · −
ndhD · PQ059349.1 · 113,934–115,457 bp · −
psaC · PQ059349.1 · 115,556–115,801 bp · −
ndhE · PQ059349.1 · 116,050–116,355 bp · −
ndhG · PQ059349.1 · 116,586–117,116 bp · −
ndhI · PQ059349.1 · 117,481–117,981 bp · −
ndhA · PQ059349.1 · 118,062–120,146 bp · −
ndhH · PQ059349.1 · 120,148–121,359 bp · −
rps15 · PQ059349.1 · 121,432–121,764 bp · −
ycf1 · PQ059349.1 · 121,979–127,624 bp · −
trnR-ACG · PQ059349.1 · 128,461–128,534 bp · −
rrn5 · PQ059349.1 · 128,769–128,889 bp · −
rrn4.5 · PQ059349.1 · 129,137–129,239 bp · −
rrn23 · PQ059349.1 · 129,338–132,150 bp · −
trnA-UGC · PQ059349.1 · 132,320–133,203 bp · −
trnI-GAU · PQ059349.1 · 133,268–134,288 bp · −
ycf68 · PQ059349.1 · 133,894–134,133 bp · −
rrn16 · PQ059349.1 · 134,587–136,077 bp · −
trnV-GAC · PQ059349.1 · 136,305–136,376 bp · −
ycf15 · PQ059349.1 · 142,630–142,827 bp · −
ycf2 · PQ059349.1 · 142,969–149,778 bp · −
psbK · PQ059349.1 · 7,713–7,898 bp · +
psbI · PQ059349.1 · 8,290–8,400 bp · +
trnG-UCC · PQ059349.1 · 9,288–10,039 bp · +
trnR-UCU · PQ059349.1 · 10,210–10,281 bp · +
trnC-GCA · PQ059349.1 · 28,425–28,495 bp · +
petN · PQ059349.1 · 29,207–29,296 bp · +
trnT-GGU · PQ059349.1 · 31,898–31,969 bp · +
psbD · PQ059349.1 · 33,275–34,336 bp · +
psbC · PQ059349.1 · 34,284–35,705 bp · +
psbZ · PQ059349.1 · 36,352–36,540 bp · +
trnG-GCC · PQ059349.1 · 36,812–36,882 bp · +
trnS-GGA · PQ059349.1 · 45,635–45,721 bp · +
trnL-UAA · PQ059349.1 · 47,711–48,273 bp · +
trnF-GAA · PQ059349.1 · 48,586–48,658 bp · +
trnM-CAU · PQ059349.1 · 52,661–52,733 bp · +
rbcL · PQ059349.1 · 55,577–57,040 bp · +
accD · PQ059349.1 · 57,774–59,240 bp · +
psaI · PQ059349.1 · 59,782–59,892 bp · +
ycf4 · PQ059349.1 · 60,326–60,880 bp · +
cemA · PQ059349.1 · 61,629–62,228 bp · +
petA · PQ059349.1 · 62,435–63,397 bp · +
petL · PQ059349.1 · 66,122–66,217 bp · +
petG · PQ059349.1 · 66,393–66,506 bp · +
psaJ · PQ059349.1 · 67,214–67,348 bp · +
rpl33 · PQ059349.1 · 67,822–68,022 bp · +
rps18 · PQ059349.1 · 68,197–68,502 bp · +
rps12 · PQ059349.1 · 137,954–138,744 bp · +
psbB · PQ059349.1 · 72,580–74,106 bp · +
psbT · PQ059349.1 · 74,298–74,399 bp · +
psbH · PQ059349.1 · 74,708–74,929 bp · +
petB · PQ059349.1 · 75,054–76,368 bp · +
petD · PQ059349.1 · 76,557–77,758 bp · +
ycf2 · PQ059349.1 · 86,157–92,966 bp · +
ycf15 · PQ059349.1 · 93,108–93,305 bp · +
trnV-GAC · PQ059349.1 · 99,559–99,630 bp · +
rrn16 · PQ059349.1 · 99,858–101,348 bp · +
trnI-GAU · PQ059349.1 · 101,647–102,667 bp · +
trnA-UGC · PQ059349.1 · 102,732–103,615 bp · +
rrn23 · PQ059349.1 · 103,785–106,597 bp · +
rrn4.5 · PQ059349.1 · 106,696–106,798 bp · +
rrn5 · PQ059349.1 · 107,046–107,166 bp · +
trnR-ACG · PQ059349.1 · 107,401–107,474 bp · +
rpl32 · PQ059349.1 · 111,930–112,106 bp · +
trnL-UAG · PQ059349.1 · 112,551–112,630 bp · +
ccsA · PQ059349.1 · 112,727–113,701 bp · +
trnN-GUU · PQ059349.1 · 127,843–127,914 bp · +
rps7 · PQ059349.1 · 138,798–139,265 bp · +
ndhB · PQ059349.1 · 139,540–141,751 bp · +
trnL-CAA · PQ059349.1 · 142,294–142,374 bp · +
trnI-CAU · PQ059349.1 · 149,867–149,940 bp · +
rpl23 · PQ059349.1 · 150,100–150,381 bp · +
rpl2 · PQ059349.1 · 150,400–151,882 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Scutellaria tayloriana
ANNOTATED PLASTOME
PQ059349.1
151,977 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37994 75988 113983 151977 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU ycf68 rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 3 76 74 Locate
psbA gene − 366 1424 1059 Locate
trnK-UUU gene − 1658 4246 2589 Locate
matK gene − 1953 3488 1536 Locate
rps16 gene − 5119 6296 1178 Locate
trnQ-UUG gene − 7317 7388 72 Locate
psbK gene + 7713 7898 186 Locate
psbI gene + 8290 8400 111 Locate
trnS-GCU gene − 8519 8606 88 Locate
trnG-UCC gene + 9288 10039 752 Locate
trnR-UCU gene + 10210 10281 72 Locate
atpA gene − 10378 11901 1524 Locate
atpF gene − 11984 13211 1228 Locate
atpH gene − 13567 13812 246 Locate
atpI gene − 14808 15551 744 Locate
rps2 gene − 15900 16610 711 Locate
rpoC2 gene − 16827 21032 4206 Locate
rpoC1 gene − 21187 24016 2830 Locate
rpoB gene − 24043 27255 3213 Locate
trnC-GCA gene + 28425 28495 71 Locate
petN gene + 29207 29296 90 Locate
psbM gene − 30289 30393 105 Locate
trnD-GUC gene − 30920 30993 74 Locate
trnY-GUA gene − 31107 31190 84 Locate
trnE-UUC gene − 31250 31322 73 Locate
trnT-GGU gene + 31898 31969 72 Locate
psbD gene + 33275 34336 1062 Locate
psbC gene + 34284 35705 1422 Locate
trnS-UGA gene − 35941 36032 92 Locate
psbZ gene + 36352 36540 189 Locate
trnG-GCC gene + 36812 36882 71 Locate
trnfM-CAU gene − 37035 37108 74 Locate
rps14 gene − 37258 37560 303 Locate
psaB gene − 37688 39892 2205 Locate
psaA gene − 39918 42170 2253 Locate
ycf3 gene − 42834 44750 1917 Locate
trnS-GGA gene + 45635 45721 87 Locate
rps4 gene − 46007 46612 606 Locate
trnT-UGU gene − 46953 47025 73 Locate
trnL-UAA gene + 47711 48273 563 Locate
trnF-GAA gene + 48586 48658 73 Locate
ndhJ gene − 49307 49783 477 Locate
ndhK gene − 49891 50568 678 Locate
ndhC gene − 50621 50983 363 Locate
trnV-UAC gene − 51828 52480 653 Locate
trnM-CAU gene + 52661 52733 73 Locate
atpE gene − 52949 53350 402 Locate
atpB gene − 53347 54834 1488 Locate
rbcL gene + 55577 57040 1464 Locate
accD gene + 57774 59240 1467 Locate
psaI gene + 59782 59892 111 Locate
ycf4 gene + 60326 60880 555 Locate
cemA gene + 61629 62228 600 Locate
petA gene + 62435 63397 963 Locate
psbJ gene − 64432 64554 123 Locate
psbL gene − 64688 64804 117 Locate
psbF gene − 64828 64947 120 Locate
psbE gene − 64962 65213 252 Locate
petL gene + 66122 66217 96 Locate
petG gene + 66393 66506 114 Locate
trnW-CCA gene − 66625 66698 74 Locate
trnP-UGG gene − 66868 66941 74 Locate
psaJ gene + 67214 67348 135 Locate
rpl33 gene + 67822 68022 201 Locate
rps18 gene + 68197 68502 306 Locate
rpl20 gene − 68739 69125 387 Locate
rps12 gene − 69914 70039 126 Locate
clpP gene − 70182 72123 1942 Locate
psbB gene + 72580 74106 1527 Locate
psbT gene + 74298 74399 102 Locate
psbN gene − 74473 74604 132 Locate
psbH gene + 74708 74929 222 Locate
petB gene + 75054 76368 1315 Locate
petD gene + 76557 77758 1202 Locate
rpoA gene − 78133 78933 801 Locate
rps11 gene − 79005 79421 417 Locate
rpl36 gene − 79523 79636 114 Locate
infA gene − 79732 79965 234 Locate
rps8 gene − 80085 80495 411 Locate
rpl14 gene − 80665 81033 369 Locate
rpl16 gene − 81160 82386 1227 Locate
rps3 gene − 82541 83203 663 Locate
rpl22 gene − 83205 83660 456 Locate
rps19 gene − 83720 83998 279 Locate
rpl2 gene − 84053 85535 1483 Locate
rpl23 gene − 85554 85835 282 Locate
trnI-CAU gene − 85995 86068 74 Locate
ycf2 gene + 86157 92966 6810 Locate
ycf15 gene + 93108 93305 198 Locate
trnL-CAA gene − 93561 93641 81 Locate
ndhB gene − 94184 96395 2212 Locate
rps7 gene − 96670 97137 468 Locate
rps12 gene − 97191 97981 791 Locate
trnV-GAC gene + 99559 99630 72 Locate
rrn16 gene + 99858 101348 1491 Locate
trnI-GAU gene + 101647 102667 1021 Locate
trnA-UGC gene + 102732 103615 884 Locate
rrn23 gene + 103785 106597 2813 Locate
rrn4.5 gene + 106696 106798 103 Locate
rrn5 gene + 107046 107166 121 Locate
trnR-ACG gene + 107401 107474 74 Locate
trnN-GUU gene − 108021 108092 72 Locate
ndhF gene − 109169 111409 2241 Locate
rpl32 gene + 111930 112106 177 Locate
trnL-UAG gene + 112551 112630 80 Locate
ccsA gene + 112727 113701 975 Locate
ndhD gene − 113934 115457 1524 Locate
psaC gene − 115556 115801 246 Locate
ndhE gene − 116050 116355 306 Locate
ndhG gene − 116586 117116 531 Locate
ndhI gene − 117481 117981 501 Locate
ndhA gene − 118062 120146 2085 Locate
ndhH gene − 120148 121359 1212 Locate
rps15 gene − 121432 121764 333 Locate
ycf1 gene − 121979 127624 5646 Locate
trnN-GUU gene + 127843 127914 72 Locate
trnR-ACG gene − 128461 128534 74 Locate
rrn5 gene − 128769 128889 121 Locate
rrn4.5 gene − 129137 129239 103 Locate
rrn23 gene − 129338 132150 2813 Locate
trnA-UGC gene − 132320 133203 884 Locate
trnI-GAU gene − 133268 134288 1021 Locate
ycf68 gene − 133894 134133 240 Locate
rrn16 gene − 134587 136077 1491 Locate
trnV-GAC gene − 136305 136376 72 Locate
rps12 gene + 137954 138744 791 Locate
rps7 gene + 138798 139265 468 Locate
ndhB gene + 139540 141751 2212 Locate
trnL-CAA gene + 142294 142374 81 Locate
ycf15 gene − 142630 142827 198 Locate
ycf2 gene − 142969 149778 6810 Locate
trnI-CAU gene + 149867 149940 74 Locate
rpl23 gene + 150100 150381 282 Locate
rpl2 gene + 150400 151882 1483 Locate
Status Available
Accession PQ059349.1
Length 151,977 bp
GC content 38.4%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources