Scutellaria teucriifolia chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PQ059238.1 · 4–77 bp · −
psbA · PQ059238.1 · 374–1,432 bp · −
trnK-UUU · PQ059238.1 · 1,674–4,255 bp · −
matK · PQ059238.1 · 1,964–3,490 bp · −
rps16 · PQ059238.1 · 5,156–6,316 bp · −
trnQ-UUG · PQ059238.1 · 7,060–7,131 bp · −
trnS-GCU · PQ059238.1 · 8,260–8,347 bp · −
atpA · PQ059238.1 · 10,148–11,671 bp · −
atpF · PQ059238.1 · 11,753–12,982 bp · −
atpH · PQ059238.1 · 13,344–13,589 bp · −
atpI · PQ059238.1 · 14,577–15,320 bp · −
rps2 · PQ059238.1 · 15,666–16,376 bp · −
rpoC2 · PQ059238.1 · 16,591–20,796 bp · −
rpoC1 · PQ059238.1 · 20,951–23,787 bp · −
rpoB · PQ059238.1 · 23,814–27,026 bp · −
psbM · PQ059238.1 · 30,103–30,207 bp · −
trnD-GUC · PQ059238.1 · 30,733–30,806 bp · −
trnY-GUA · PQ059238.1 · 30,920–31,003 bp · −
trnE-UUC · PQ059238.1 · 31,063–31,135 bp · −
trnS-UGA · PQ059238.1 · 35,748–35,839 bp · −
trnfM-CAU · PQ059238.1 · 36,836–36,909 bp · −
rps14 · PQ059238.1 · 37,064–37,366 bp · −
psaB · PQ059238.1 · 37,494–39,698 bp · −
psaA · PQ059238.1 · 39,724–41,976 bp · −
ycf3 · PQ059238.1 · 42,669–44,591 bp · −
rps4 · PQ059238.1 · 45,835–46,440 bp · −
trnT-UGU · PQ059238.1 · 46,785–46,857 bp · −
ndhJ · PQ059238.1 · 49,088–49,564 bp · −
ndhK · PQ059238.1 · 49,673–50,434 bp · −
ndhC · PQ059238.1 · 50,404–50,766 bp · −
trnV-UAC · PQ059238.1 · 51,752–52,404 bp · −
atpE · PQ059238.1 · 52,859–53,260 bp · −
atpB · PQ059238.1 · 53,257–54,753 bp · −
psbJ · PQ059238.1 · 64,488–64,610 bp · −
psbL · PQ059238.1 · 64,744–64,860 bp · −
psbF · PQ059238.1 · 64,884–65,003 bp · −
psbE · PQ059238.1 · 65,018–65,269 bp · −
trnW-CCA · PQ059238.1 · 66,649–66,722 bp · −
trnP-UGG · PQ059238.1 · 66,892–66,965 bp · −
rpl20 · PQ059238.1 · 68,763–69,149 bp · −
rps12 · PQ059238.1 · 69,932–70,057 bp · −
rps12 · PQ059238.1 · 97,191–97,981 bp · −
clpP · PQ059238.1 · 70,199–72,127 bp · −
psbN · PQ059238.1 · 74,465–74,596 bp · −
rpoA · PQ059238.1 · 78,158–78,958 bp · −
rps11 · PQ059238.1 · 79,030–79,446 bp · −
rpl36 · PQ059238.1 · 79,548–79,661 bp · −
infA · PQ059238.1 · 79,756–79,989 bp · −
rps8 · PQ059238.1 · 80,113–80,523 bp · −
rpl14 · PQ059238.1 · 80,675–81,043 bp · −
rpl16 · PQ059238.1 · 81,170–82,403 bp · −
rps3 · PQ059238.1 · 82,559–83,221 bp · −
rpl22 · PQ059238.1 · 83,223–83,678 bp · −
rps19 · PQ059238.1 · 83,738–84,016 bp · −
rpl2 · PQ059238.1 · 84,071–85,552 bp · −
rpl23 · PQ059238.1 · 85,571–85,852 bp · −
trnI-CAU · PQ059238.1 · 86,012–86,085 bp · −
trnL-CAA · PQ059238.1 · 93,561–93,641 bp · −
ndhB · PQ059238.1 · 94,184–96,395 bp · −
rps7 · PQ059238.1 · 96,670–97,137 bp · −
trnN-GUU · PQ059238.1 · 108,017–108,088 bp · −
ndhF · PQ059238.1 · 109,145–111,406 bp · −
ndhD · PQ059238.1 · 113,765–115,267 bp · −
psaC · PQ059238.1 · 115,395–115,640 bp · −
ndhE · PQ059238.1 · 115,896–116,201 bp · −
ndhG · PQ059238.1 · 116,418–116,948 bp · −
ndhI · PQ059238.1 · 117,315–117,815 bp · −
ndhA · PQ059238.1 · 117,901–120,022 bp · −
ndhH · PQ059238.1 · 120,024–121,205 bp · −
rps15 · PQ059238.1 · 121,302–121,574 bp · −
ycf1 · PQ059238.1 · 121,772–127,402 bp · −
trnR-ACG · PQ059238.1 · 128,241–128,314 bp · −
rrn5 · PQ059238.1 · 128,549–128,669 bp · −
rrn4.5 · PQ059238.1 · 128,917–129,019 bp · −
rrn23 · PQ059238.1 · 129,118–131,929 bp · −
trnA-UGC · PQ059238.1 · 132,099–132,983 bp · −
trnI-GAU · PQ059238.1 · 133,048–134,069 bp · −
ycf68 · PQ059238.1 · 133,621–133,914 bp · −
rrn16 · PQ059238.1 · 134,368–135,858 bp · −
trnV-GAC · PQ059238.1 · 136,085–136,156 bp · −
ycf15 · PQ059238.1 · 142,408–142,656 bp · −
ycf2 · PQ059238.1 · 142,747–149,535 bp · −
psbK · PQ059238.1 · 7,456–7,641 bp · +
psbI · PQ059238.1 · 8,031–8,141 bp · +
trnG-UCC · PQ059238.1 · 9,049–9,805 bp · +
trnR-UCU · PQ059238.1 · 9,980–10,051 bp · +
trnC-GCA · PQ059238.1 · 28,178–28,248 bp · +
petN · PQ059238.1 · 28,963–29,052 bp · +
trnT-GGU · PQ059238.1 · 31,711–31,782 bp · +
psbD · PQ059238.1 · 33,082–34,143 bp · +
psbC · PQ059238.1 · 34,091–35,512 bp · +
psbZ · PQ059238.1 · 36,155–36,343 bp · +
trnG-GCC · PQ059238.1 · 36,617–36,687 bp · +
trnS-GGA · PQ059238.1 · 45,473–45,559 bp · +
trnL-UAA · PQ059238.1 · 47,516–48,075 bp · +
trnF-GAA · PQ059238.1 · 48,376–48,448 bp · +
trnM-CAU · PQ059238.1 · 52,593–52,665 bp · +
rbcL · PQ059238.1 · 55,504–56,967 bp · +
accD · PQ059238.1 · 57,681–59,159 bp · +
psaI · PQ059238.1 · 59,865–59,975 bp · +
ycf4 · PQ059238.1 · 60,409–60,963 bp · +
cemA · PQ059238.1 · 61,712–62,311 bp · +
petA · PQ059238.1 · 62,518–63,480 bp · +
petL · PQ059238.1 · 66,146–66,241 bp · +
petG · PQ059238.1 · 66,417–66,530 bp · +
psaJ · PQ059238.1 · 67,237–67,371 bp · +
rpl33 · PQ059238.1 · 67,848–68,048 bp · +
rps18 · PQ059238.1 · 68,223–68,528 bp · +
rps12 · PQ059238.1 · 137,728–138,518 bp · +
psbB · PQ059238.1 · 72,579–74,105 bp · +
psbT · PQ059238.1 · 74,297–74,404 bp · +
psbH · PQ059238.1 · 74,700–74,921 bp · +
petB · PQ059238.1 · 75,046–76,414 bp · +
petD · PQ059238.1 · 76,597–77,803 bp · +
ycf2 · PQ059238.1 · 86,174–92,962 bp · +
ycf15 · PQ059238.1 · 93,053–93,301 bp · +
trnV-GAC · PQ059238.1 · 99,553–99,624 bp · +
rrn16 · PQ059238.1 · 99,851–101,341 bp · +
trnI-GAU · PQ059238.1 · 101,640–102,661 bp · +
trnA-UGC · PQ059238.1 · 102,726–103,610 bp · +
rrn23 · PQ059238.1 · 103,780–106,591 bp · +
rrn4.5 · PQ059238.1 · 106,690–106,792 bp · +
rrn5 · PQ059238.1 · 107,040–107,160 bp · +
trnR-ACG · PQ059238.1 · 107,395–107,468 bp · +
rpl32 · PQ059238.1 · 111,730–111,906 bp · +
trnL-UAG · PQ059238.1 · 112,353–112,432 bp · +
ccsA · PQ059238.1 · 112,534–113,508 bp · +
trnN-GUU · PQ059238.1 · 127,621–127,692 bp · +
rps7 · PQ059238.1 · 138,572–139,039 bp · +
ndhB · PQ059238.1 · 139,314–141,525 bp · +
trnL-CAA · PQ059238.1 · 142,068–142,148 bp · +
trnI-CAU · PQ059238.1 · 149,624–149,697 bp · +
rpl23 · PQ059238.1 · 149,857–150,138 bp · +
rpl2 · PQ059238.1 · 150,157–151,638 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Scutellaria teucriifolia
ANNOTATED PLASTOME
PQ059238.1
151,738 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37934 75869 113804 151738 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU ycf68 rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 4 77 74 Locate
psbA gene − 374 1432 1059 Locate
trnK-UUU gene − 1674 4255 2582 Locate
matK gene − 1964 3490 1527 Locate
rps16 gene − 5156 6316 1161 Locate
trnQ-UUG gene − 7060 7131 72 Locate
psbK gene + 7456 7641 186 Locate
psbI gene + 8031 8141 111 Locate
trnS-GCU gene − 8260 8347 88 Locate
trnG-UCC gene + 9049 9805 757 Locate
trnR-UCU gene + 9980 10051 72 Locate
atpA gene − 10148 11671 1524 Locate
atpF gene − 11753 12982 1230 Locate
atpH gene − 13344 13589 246 Locate
atpI gene − 14577 15320 744 Locate
rps2 gene − 15666 16376 711 Locate
rpoC2 gene − 16591 20796 4206 Locate
rpoC1 gene − 20951 23787 2837 Locate
rpoB gene − 23814 27026 3213 Locate
trnC-GCA gene + 28178 28248 71 Locate
petN gene + 28963 29052 90 Locate
psbM gene − 30103 30207 105 Locate
trnD-GUC gene − 30733 30806 74 Locate
trnY-GUA gene − 30920 31003 84 Locate
trnE-UUC gene − 31063 31135 73 Locate
trnT-GGU gene + 31711 31782 72 Locate
psbD gene + 33082 34143 1062 Locate
psbC gene + 34091 35512 1422 Locate
trnS-UGA gene − 35748 35839 92 Locate
psbZ gene + 36155 36343 189 Locate
trnG-GCC gene + 36617 36687 71 Locate
trnfM-CAU gene − 36836 36909 74 Locate
rps14 gene − 37064 37366 303 Locate
psaB gene − 37494 39698 2205 Locate
psaA gene − 39724 41976 2253 Locate
ycf3 gene − 42669 44591 1923 Locate
trnS-GGA gene + 45473 45559 87 Locate
rps4 gene − 45835 46440 606 Locate
trnT-UGU gene − 46785 46857 73 Locate
trnL-UAA gene + 47516 48075 560 Locate
trnF-GAA gene + 48376 48448 73 Locate
ndhJ gene − 49088 49564 477 Locate
ndhK gene − 49673 50434 762 Locate
ndhC gene − 50404 50766 363 Locate
trnV-UAC gene − 51752 52404 653 Locate
trnM-CAU gene + 52593 52665 73 Locate
atpE gene − 52859 53260 402 Locate
atpB gene − 53257 54753 1497 Locate
rbcL gene + 55504 56967 1464 Locate
accD gene + 57681 59159 1479 Locate
psaI gene + 59865 59975 111 Locate
ycf4 gene + 60409 60963 555 Locate
cemA gene + 61712 62311 600 Locate
petA gene + 62518 63480 963 Locate
psbJ gene − 64488 64610 123 Locate
psbL gene − 64744 64860 117 Locate
psbF gene − 64884 65003 120 Locate
psbE gene − 65018 65269 252 Locate
petL gene + 66146 66241 96 Locate
petG gene + 66417 66530 114 Locate
trnW-CCA gene − 66649 66722 74 Locate
trnP-UGG gene − 66892 66965 74 Locate
psaJ gene + 67237 67371 135 Locate
rpl33 gene + 67848 68048 201 Locate
rps18 gene + 68223 68528 306 Locate
rpl20 gene − 68763 69149 387 Locate
rps12 gene − 69932 70057 126 Locate
clpP gene − 70199 72127 1929 Locate
psbB gene + 72579 74105 1527 Locate
psbT gene + 74297 74404 108 Locate
psbN gene − 74465 74596 132 Locate
psbH gene + 74700 74921 222 Locate
petB gene + 75046 76414 1369 Locate
petD gene + 76597 77803 1207 Locate
rpoA gene − 78158 78958 801 Locate
rps11 gene − 79030 79446 417 Locate
rpl36 gene − 79548 79661 114 Locate
infA gene − 79756 79989 234 Locate
rps8 gene − 80113 80523 411 Locate
rpl14 gene − 80675 81043 369 Locate
rpl16 gene − 81170 82403 1234 Locate
rps3 gene − 82559 83221 663 Locate
rpl22 gene − 83223 83678 456 Locate
rps19 gene − 83738 84016 279 Locate
rpl2 gene − 84071 85552 1482 Locate
rpl23 gene − 85571 85852 282 Locate
trnI-CAU gene − 86012 86085 74 Locate
ycf2 gene + 86174 92962 6789 Locate
ycf15 gene + 93053 93301 249 Locate
trnL-CAA gene − 93561 93641 81 Locate
ndhB gene − 94184 96395 2212 Locate
rps7 gene − 96670 97137 468 Locate
rps12 gene − 97191 97981 791 Locate
trnV-GAC gene + 99553 99624 72 Locate
rrn16 gene + 99851 101341 1491 Locate
trnI-GAU gene + 101640 102661 1022 Locate
trnA-UGC gene + 102726 103610 885 Locate
rrn23 gene + 103780 106591 2812 Locate
rrn4.5 gene + 106690 106792 103 Locate
rrn5 gene + 107040 107160 121 Locate
trnR-ACG gene + 107395 107468 74 Locate
trnN-GUU gene − 108017 108088 72 Locate
ndhF gene − 109145 111406 2262 Locate
rpl32 gene + 111730 111906 177 Locate
trnL-UAG gene + 112353 112432 80 Locate
ccsA gene + 112534 113508 975 Locate
ndhD gene − 113765 115267 1503 Locate
psaC gene − 115395 115640 246 Locate
ndhE gene − 115896 116201 306 Locate
ndhG gene − 116418 116948 531 Locate
ndhI gene − 117315 117815 501 Locate
ndhA gene − 117901 120022 2122 Locate
ndhH gene − 120024 121205 1182 Locate
rps15 gene − 121302 121574 273 Locate
ycf1 gene − 121772 127402 5631 Locate
trnN-GUU gene + 127621 127692 72 Locate
trnR-ACG gene − 128241 128314 74 Locate
rrn5 gene − 128549 128669 121 Locate
rrn4.5 gene − 128917 129019 103 Locate
rrn23 gene − 129118 131929 2812 Locate
trnA-UGC gene − 132099 132983 885 Locate
trnI-GAU gene − 133048 134069 1022 Locate
ycf68 gene − 133621 133914 294 Locate
rrn16 gene − 134368 135858 1491 Locate
trnV-GAC gene − 136085 136156 72 Locate
rps12 gene + 137728 138518 791 Locate
rps7 gene + 138572 139039 468 Locate
ndhB gene + 139314 141525 2212 Locate
trnL-CAA gene + 142068 142148 81 Locate
ycf15 gene − 142408 142656 249 Locate
ycf2 gene − 142747 149535 6789 Locate
trnI-CAU gene + 149624 149697 74 Locate
rpl23 gene + 149857 150138 282 Locate
rpl2 gene + 150157 151638 1482 Locate
Status Available
Accession PQ059238.1
Length 151,738 bp
GC content 38.3%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources