Coordinate-aware organelle record

Scutellaria theobromina chloroplast genome

Available PQ059239.1 151,809 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	373	1432	1059
trnK-UUU	gene	translation-rna	−	1673	4255	2582
matK	gene	other	−	1963	3490	1527
rps16	gene	ribosomal-protein	−	5157	6318	1161
trnQ-UUG	gene	translation-rna	−	7052	7124	72
psbK	gene	photosystem-ii	+	7448	7634	186
psbI	gene	photosystem-ii	+	8024	8135	111
trnS-GCU	gene	translation-rna	−	8254	8342	88
trnG-UCC	gene	translation-rna	+	9042	9799	757
trnR-UCU	gene	translation-rna	+	9973	10045	72
atpA	gene	atp-synthase	−	10141	11665	1524
atpF	gene	atp-synthase	−	11746	12976	1230
atpH	gene	atp-synthase	−	13331	13577	246
atpI	gene	atp-synthase	−	14564	15308	744
rps2	gene	ribosomal-protein	−	15653	16364	711
rpoC2	gene	rna-polymerase	−	16579	20785	4206
rpoC1	gene	rna-polymerase	−	20939	23776	2837
rpoB	gene	rna-polymerase	−	23802	27015	3213
trnC-GCA	gene	translation-rna	+	28175	28246	71
petN	gene	cytochrome	+	28962	29052	90
psbM	gene	photosystem-ii	−	30094	30199	105
trnD-GUC	gene	translation-rna	−	30723	30797	74
trnY-GUA	gene	translation-rna	−	30910	30994	84
trnE-UUC	gene	translation-rna	−	31053	31126	73
trnT-GGU	gene	translation-rna	+	31701	31773	72
psbD	gene	photosystem-ii	+	33078	34140	1062
psbC	gene	photosystem-ii	+	34087	35509	1422
trnS-UGA	gene	translation-rna	−	35744	35836	92
psbZ	gene	photosystem-ii	+	36151	36340	189
trnG-GCC	gene	translation-rna	+	36616	36687	71
trnfM-CAU	gene	translation-rna	−	36831	36905	74
rps14	gene	ribosomal-protein	−	37059	37362	303
psaB	gene	photosystem-i	−	37490	39695	2205
psaA	gene	photosystem-i	−	39720	41973	2253
ycf3	gene	other	−	42677	44602	1925
trnS-GGA	gene	translation-rna	+	45484	45571	87
rps4	gene	ribosomal-protein	−	45846	46452	606
trnT-UGU	gene	translation-rna	−	46793	46866	73
trnL-UAA	gene	translation-rna	+	47546	48106	560
trnF-GAA	gene	translation-rna	+	48407	48480	73
ndhJ	gene	nad-dehydrogenase	−	49127	49604	477
ndhK	gene	nad-dehydrogenase	−	49712	50474	762
ndhC	gene	nad-dehydrogenase	−	50443	50806	363
trnV-UAC	gene	translation-rna	−	51791	52444	653
trnM-CAU	gene	translation-rna	+	52632	52705	73
atpE	gene	atp-synthase	−	52898	53300	402
atpB	gene	atp-synthase	−	53296	54793	1497
rbcL	gene	other	+	55543	57007	1464
accD	gene	other	+	57721	59200	1479
psaI	gene	photosystem-i	+	59905	60016	111
ycf4	gene	other	+	60449	61004	555
cemA	gene	other	+	61751	62351	600
petA	gene	cytochrome	+	62557	63520	963
psbJ	gene	photosystem-ii	−	64528	64651	123
psbL	gene	photosystem-ii	−	64784	65006	222
psbF	gene	photosystem-ii	−	64924	65044	120
psbE	gene	photosystem-ii	−	65058	65310	252
petL	gene	cytochrome	+	66187	66283	96
petG	gene	cytochrome	+	66458	66572	114
trnW-CCA	gene	translation-rna	−	66690	66764	74
trnP-UGG	gene	translation-rna	−	66933	67007	74
psaJ	gene	photosystem-i	+	67215	67413	198
rpl33	gene	ribosomal-protein	+	67896	68097	201
rps18	gene	ribosomal-protein	+	68271	68577	306
rpl20	gene	ribosomal-protein	−	68811	69198	387
rps12	gene	ribosomal-protein	−	69992	98044	28052
rps12	gene	ribosomal-protein	+	69992	138577	68585
clpP	gene	other	−	70247	72176	1929
psbB	gene	photosystem-ii	+	72627	74154	1527
psbT	gene	photosystem-ii	+	74345	74453	108
psbN	gene	photosystem-ii	−	74513	74645	132
psbH	gene	photosystem-ii	+	74748	74970	222
petB	gene	cytochrome	+	75094	76464	1370
petD	gene	cytochrome	+	76646	77853	1207
rpoA	gene	rna-polymerase	−	78207	79008	801
rps11	gene	ribosomal-protein	−	79079	79496	417
rpl36	gene	ribosomal-protein	−	79597	79711	114
infA	gene	other	−	79805	80039	234
rps8	gene	ribosomal-protein	−	80162	80573	411
rpl14	gene	ribosomal-protein	−	80725	81094	369
rpl16	gene	ribosomal-protein	−	81220	82454	1234
rps3	gene	ribosomal-protein	−	82609	83272	663
rpl22	gene	ribosomal-protein	−	83273	83729	456
rps19	gene	ribosomal-protein	−	83788	84067	279
rpl2	gene	ribosomal-protein	−	84121	85603	1482
rpl23	gene	ribosomal-protein	−	85621	85903	282
trnI-CAU	gene	translation-rna	−	86062	86136	74
ycf2	gene	other	+	86224	93025	6801
ycf15	gene	other	+	93166	93364	198
trnL-CAA	gene	translation-rna	−	93623	93704	81
ndhB	gene	nad-dehydrogenase	−	94246	96404	2158
rps7	gene	ribosomal-protein	−	96732	97200	468
trnV-GAC	gene	translation-rna	+	99615	99687	72
rrn16	gene	ribosomal-rna	+	99913	101404	1491
trnI-GAU	gene	translation-rna	+	101702	102723	1021
trnA-UGC	gene	translation-rna	+	102787	103673	886
rrn23	gene	ribosomal-rna	+	103835	106647	2812
rrn4.5	gene	ribosomal-rna	+	106745	106848	103
rrn5	gene	ribosomal-rna	+	107095	107216	121
trnR-ACG	gene	translation-rna	+	107450	107524	74
trnN-GUU	gene	translation-rna	−	108072	108144	72
ndhF	gene	nad-dehydrogenase	−	109200	111462	2262
rpl32	gene	ribosomal-protein	+	111789	111966	177
trnL-UAG	gene	translation-rna	+	112412	112492	80
ccsA	gene	other	+	112593	113568	975
ndhD	gene	nad-dehydrogenase	−	113824	115354	1530
psaC	gene	photosystem-i	−	115454	115700	246
ndhE	gene	nad-dehydrogenase	−	115955	116261	306
ndhG	gene	nad-dehydrogenase	−	116477	117008	531
ndhI	gene	nad-dehydrogenase	−	117374	117875	501
ndhA	gene	nad-dehydrogenase	−	117960	120082	2122
ndhH	gene	nad-dehydrogenase	−	120083	121295	1212
rps15	gene	ribosomal-protein	−	121361	121634	273
ycf1	gene	other	−	121831	127468	5637
trnN-GUU	gene	translation-rna	+	127686	127758	72
trnR-ACG	gene	translation-rna	−	128306	128380	74
rrn5	gene	ribosomal-rna	−	128614	128735	121
rrn4.5	gene	ribosomal-rna	−	128982	129085	103
rrn23	gene	ribosomal-rna	−	129183	131995	2812
trnA-UGC	gene	translation-rna	−	132157	133043	886
trnI-GAU	gene	translation-rna	−	133107	134128	1021
ycf68	gene	other	−	133679	133973	294
rrn16	gene	ribosomal-rna	−	134426	135917	1491
trnV-GAC	gene	translation-rna	−	136143	136215	72
rps7	gene	ribosomal-protein	+	138630	139098	468
ndhB	gene	nad-dehydrogenase	+	139426	141584	2158
trnL-CAA	gene	translation-rna	+	142126	142207	81
ycf15	gene	other	−	142466	142664	198
ycf2	gene	other	−	142805	149606	6801
trnI-CAU	gene	translation-rna	+	149694	149768	74
rpl23	gene	ribosomal-protein	+	149927	150209	282
rpl2	gene	ribosomal-protein	+	150227	151709	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059239.1DNA · accDPQ059239DNA · atpBPQ059239DNA · matKPQ059239DNA · ndhFPQ059239DNA · psbAPQ059239DNA · rbcLPQ059239DNA · rps12PQ059239DNA · ycf1PQ059239