Coordinate-aware organelle record

Scutellaria tienchuanensis chloroplast genome

Available PQ059351.1 152,496 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	368	1427	1059
trnK-UUU	gene	translation-rna	−	1669	4258	2589
matK	gene	other	−	1964	3500	1536
rps16	gene	ribosomal-protein	−	5122	6291	1169
trnQ-UUG	gene	translation-rna	−	7408	7480	72
psbK	gene	photosystem-ii	+	7804	7990	186
psbI	gene	photosystem-ii	+	8381	8492	111
trnS-GCU	gene	translation-rna	−	8610	8698	88
trnG-UCC	gene	translation-rna	+	9374	10135	761
trnR-UCU	gene	translation-rna	+	10309	10381	72
atpA	gene	atp-synthase	−	10477	12001	1524
atpF	gene	atp-synthase	−	12083	13313	1230
atpH	gene	atp-synthase	−	13678	13924	246
atpI	gene	atp-synthase	−	14911	15655	744
rps2	gene	ribosomal-protein	−	16003	16840	837
rpoC2	gene	rna-polymerase	−	16930	21136	4206
rpoC1	gene	rna-polymerase	−	21290	24130	2840
rpoB	gene	rna-polymerase	−	24156	27369	3213
trnC-GCA	gene	translation-rna	+	28537	28608	71
petN	gene	cytochrome	+	29326	29416	90
psbM	gene	photosystem-ii	−	30434	30539	105
trnD-GUC	gene	translation-rna	−	31065	31139	74
trnY-GUA	gene	translation-rna	−	31252	31336	84
trnE-UUC	gene	translation-rna	−	31395	31468	73
trnT-GGU	gene	translation-rna	+	32043	32115	72
psbD	gene	photosystem-ii	+	33425	34487	1062
psbC	gene	photosystem-ii	+	34434	35856	1422
trnS-UGA	gene	translation-rna	−	36090	36182	92
psbZ	gene	photosystem-ii	+	36501	36690	189
trnG-GCC	gene	translation-rna	+	36961	37032	71
trnfM-CAU	gene	translation-rna	−	37184	37258	74
rps14	gene	ribosomal-protein	−	37407	37710	303
psaB	gene	photosystem-i	−	37837	40042	2205
psaA	gene	photosystem-i	−	40067	42320	2253
ycf3	gene	other	−	42991	44913	1922
trnS-GGA	gene	translation-rna	+	45811	45898	87
rps4	gene	ribosomal-protein	−	46183	46789	606
trnT-UGU	gene	translation-rna	−	47132	47205	73
trnL-UAA	gene	translation-rna	+	47889	48451	562
trnF-GAA	gene	translation-rna	+	48757	48830	73
ndhJ	gene	nad-dehydrogenase	−	49478	49955	477
ndhK	gene	nad-dehydrogenase	−	50062	50740	678
ndhC	gene	nad-dehydrogenase	−	50792	51155	363
trnV-UAC	gene	translation-rna	−	52143	52796	653
trnM-CAU	gene	translation-rna	+	52976	53049	73
atpE	gene	atp-synthase	−	53258	53660	402
atpB	gene	atp-synthase	−	53656	55144	1488
rbcL	gene	other	+	55886	57350	1464
accD	gene	other	+	58069	59536	1467
psaI	gene	photosystem-i	+	60252	60363	111
ycf4	gene	other	+	60796	61351	555
cemA	gene	other	+	62088	62688	600
petA	gene	cytochrome	+	62894	63857	963
psbJ	gene	photosystem-ii	−	64889	65012	123
psbL	gene	photosystem-ii	−	65145	65262	117
psbF	gene	photosystem-ii	−	65285	65405	120
psbE	gene	photosystem-ii	−	65419	65671	252
petL	gene	cytochrome	+	66579	66675	96
petG	gene	cytochrome	+	66850	66964	114
trnW-CCA	gene	translation-rna	−	67082	67156	74
trnP-UGG	gene	translation-rna	−	67326	67400	74
psaJ	gene	photosystem-i	+	67672	67807	135
rpl33	gene	ribosomal-protein	+	68279	68480	201
rps18	gene	ribosomal-protein	+	68654	68960	306
rpl20	gene	ribosomal-protein	−	69196	69583	387
rps12	gene	ribosomal-protein	−	70383	98511	28128
rps12	gene	ribosomal-protein	+	70383	139263	68880
clpP	gene	other	−	70639	72573	1934
psbB	gene	photosystem-ii	+	73039	74566	1527
psbT	gene	photosystem-ii	+	74757	74859	102
psbN	gene	photosystem-ii	−	74932	75064	132
psbH	gene	photosystem-ii	+	75167	75389	222
petB	gene	cytochrome	+	75513	76883	1370
petD	gene	cytochrome	+	77071	78276	1205
rpoA	gene	rna-polymerase	−	78438	79446	1008
rps11	gene	ribosomal-protein	−	79517	79934	417
rpl36	gene	ribosomal-protein	−	80035	80149	114
infA	gene	other	−	80244	80478	234
rps8	gene	ribosomal-protein	−	80597	81008	411
rpl14	gene	ribosomal-protein	−	81177	81546	369
rpl16	gene	ribosomal-protein	−	81672	82916	1244
rps3	gene	ribosomal-protein	−	83070	83733	663
rpl22	gene	ribosomal-protein	−	83734	84190	456
rps19	gene	ribosomal-protein	−	84249	84528	279
rpl2	gene	ribosomal-protein	−	84582	86065	1483
rpl23	gene	ribosomal-protein	−	86083	86365	282
trnI-CAU	gene	translation-rna	−	86524	86598	74
ycf2	gene	other	+	86686	93496	6810
ycf15	gene	other	+	93586	93835	249
trnL-CAA	gene	translation-rna	−	94090	94171	81
ndhB	gene	nad-dehydrogenase	−	94713	96871	2158
rps7	gene	ribosomal-protein	−	97199	97667	468
trnV-GAC	gene	translation-rna	+	100088	100160	72
rrn16	gene	ribosomal-rna	+	100387	101878	1491
trnI-GAU	gene	translation-rna	+	102176	103197	1021
trnA-UGC	gene	translation-rna	+	103261	104142	881
rrn23	gene	ribosomal-rna	+	104311	107124	2813
rrn4.5	gene	ribosomal-rna	+	107222	107325	103
rrn5	gene	ribosomal-rna	+	107572	107693	121
trnR-ACG	gene	translation-rna	+	107927	108001	74
trnN-GUU	gene	translation-rna	−	108547	108619	72
ndhF	gene	nad-dehydrogenase	−	109695	111936	2241
rpl32	gene	ribosomal-protein	+	112456	112633	177
trnL-UAG	gene	translation-rna	+	113078	113158	80
ccsA	gene	other	+	113241	114216	975
ndhD	gene	nad-dehydrogenase	−	114448	115951	1503
psaC	gene	photosystem-i	−	116070	116316	246
ndhE	gene	nad-dehydrogenase	−	116572	116878	306
ndhG	gene	nad-dehydrogenase	−	117108	117639	531
ndhI	gene	nad-dehydrogenase	−	118004	118505	501
ndhA	gene	nad-dehydrogenase	−	118585	120680	2095
ndhH	gene	nad-dehydrogenase	−	120681	121863	1182
rps15	gene	ribosomal-protein	−	121966	122239	273
ycf1	gene	other	−	122504	128144	5640
trnN-GUU	gene	translation-rna	+	128362	128434	72
trnR-ACG	gene	translation-rna	−	128980	129054	74
rrn5	gene	ribosomal-rna	−	129288	129409	121
rrn4.5	gene	ribosomal-rna	−	129656	129759	103
rrn23	gene	ribosomal-rna	−	129857	132670	2813
trnI-GAU	gene	translation-rna	−	133786	134807	1021
ycf68	gene	other	−	134412	134652	240
rrn16	gene	ribosomal-rna	−	135105	136596	1491
trnV-GAC	gene	translation-rna	−	136823	136895	72
rps7	gene	ribosomal-protein	+	139316	139784	468
ndhB	gene	nad-dehydrogenase	+	140112	142270	2158
trnL-CAA	gene	translation-rna	+	142812	142893	81
ycf15	gene	other	−	143148	143397	249
ycf2	gene	other	−	143487	150297	6810
trnI-CAU	gene	translation-rna	+	150385	150459	74
rpl23	gene	ribosomal-protein	+	150618	150900	282
rpl2	gene	ribosomal-protein	+	150918	152401	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059351.1DNA · accDPQ059351DNA · atpBPQ059351DNA · matKPQ059351DNA · ndhFPQ059351DNA · psbAPQ059351DNA · rbcLPQ059351DNA · rps12PQ059351DNA · ycf1PQ059351