Coordinate-aware organelle record

Scutellaria tomentosa chloroplast genome

Available MW420943.1 151,777 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	373	1432	1059
trnK-UUU	gene	translation-rna	−	1677	4251	2574
matK	gene	other	−	1963	3490	1527
rps16	gene	ribosomal-protein	−	5157	6315	1158
trnQ-UUC	gene	translation-rna	−	7055	7127	72
psbK	gene	photosystem-ii	+	7451	7637	186
psbI	gene	photosystem-ii	+	8027	8138	111
trnS-GCU	gene	translation-rna	−	8255	8343	88
trnG-CGA	gene	translation-rna	+	9045	9802	757
trnR-UCU	gene	translation-rna	+	9976	10048	72
atpA	gene	atp-synthase	−	10144	11668	1524
atpF	gene	atp-synthase	−	11749	12979	1230
atpH	gene	atp-synthase	−	13339	13585	246
atpI	gene	atp-synthase	−	14572	15316	744
rps2	gene	ribosomal-protein	−	15661	16372	711
rpoC2	gene	rna-polymerase	−	16587	20793	4206
rpoC1	gene	rna-polymerase	−	20947	23777	2830
rpoB	gene	rna-polymerase	−	23803	27016	3213
trnC-GCA	gene	translation-rna	+	28176	28247	71
petN	gene	cytochrome	+	28962	29052	90
psbM	gene	photosystem-ii	−	30060	30165	105
trnD-GUC	gene	translation-rna	−	30690	30764	74
trnY-GUA	gene	translation-rna	−	30878	30962	84
trnE-UUC	gene	translation-rna	−	31021	31094	73
trnT-GGU	gene	translation-rna	+	31669	31741	72
psbD	gene	photosystem-ii	+	33046	34108	1062
psbC	gene	photosystem-ii	+	34055	35477	1422
trnS-UCA	gene	translation-rna	−	35711	35804	93
psbZ	gene	photosystem-ii	+	36119	36308	189
trnG-GCC	gene	translation-rna	+	36581	36652	71
trnfM-CAU	gene	translation-rna	−	36800	36874	74
rps14	gene	ribosomal-protein	−	37028	37331	303
psaB	gene	photosystem-i	−	37459	39664	2205
psaA	gene	photosystem-i	−	39689	41942	2253
ycf3	gene	other	−	42644	44567	1923
trnS-GGA	gene	translation-rna	+	45449	45536	87
rps4	gene	ribosomal-protein	−	45811	46417	606
trnT-UGU	gene	translation-rna	−	46758	46831	73
trnL-UAA	gene	translation-rna	+	47511	48072	561
trnF-GAA	gene	translation-rna	+	48371	48444	73
ndhJ	gene	nad-dehydrogenase	−	49092	49569	477
ndhK	gene	nad-dehydrogenase	−	49677	50355	678
ndhC	gene	nad-dehydrogenase	−	50408	50771	363
trnV-UAC	gene	translation-rna	−	51756	52409	653
trnM-CAU	gene	translation-rna	+	52597	52670	73
atpE	gene	atp-synthase	−	52863	53265	402
atpB	gene	atp-synthase	−	53261	54758	1497
rbcL	gene	other	+	55529	56972	1443
accD	gene	other	+	57680	59159	1479
psaI	gene	photosystem-i	+	59865	59976	111
ycf4	gene	other	+	60409	60964	555
cemA	gene	other	+	61652	62312	660
petA	gene	cytochrome	+	62518	63481	963
pabJ	gene	other	−	64488	64611	123
psbL	gene	photosystem-ii	−	64744	64861	117
psbF	gene	photosystem-ii	−	64884	65004	120
psbE	gene	photosystem-ii	−	65018	65270	252
petL	gene	cytochrome	+	66147	66243	96
petG	gene	cytochrome	+	66418	66532	114
trnW-CCA	gene	translation-rna	−	66650	66724	74
trnP-UGG	gene	translation-rna	−	66893	66967	74
psbJ	gene	photosystem-ii	+	67238	67373	135
rpl33	gene	ribosomal-protein	+	67856	68057	201
rps18	gene	ribosomal-protein	+	68231	68537	306
rpl20	gene	ribosomal-protein	−	68771	69158	387
rps12	gene	ribosomal-protein	−	69940	98008	28068
rps12	gene	ribosomal-protein	+	69940	138545	68605
clpP	gene	other	−	70207	72135	1928
psbB	gene	photosystem-ii	+	72586	74113	1527
psbT	gene	photosystem-ii	+	74304	74412	108
psbN	gene	photosystem-ii	−	74472	74604	132
psbH	gene	photosystem-ii	+	74707	74929	222
petB	gene	cytochrome	+	75053	76423	1370
petD	gene	cytochrome	+	76605	77812	1207
rpoA	gene	rna-polymerase	−	77974	78967	993
rps11	gene	ribosomal-protein	−	79038	79455	417
rpl36	gene	ribosomal-protein	−	79556	79670	114
infA	gene	other	−	79764	79998	234
rps8	gene	ribosomal-protein	−	80121	80532	411
rpl14	gene	ribosomal-protein	−	80684	81053	369
rpl16	gene	ribosomal-protein	−	81179	82418	1239
rps3	gene	ribosomal-protein	−	82573	83236	663
rpl22	gene	ribosomal-protein	−	83237	83693	456
rps19	gene	ribosomal-protein	−	83752	84031	279
rpl2	gene	ribosomal-protein	−	84085	85567	1482
rpl23	gene	ribosomal-protein	−	85585	85867	282
trnI-CAU	gene	translation-rna	−	86026	86100	74
ycf2	gene	other	+	86188	92989	6801
ycf15	gene	other	+	93130	93328	198
trnL-CAA	gene	translation-rna	−	93587	93668	81
ndhB	gene	nad-dehydrogenase	−	94210	96422	2212
rps7	gene	ribosomal-protein	−	96696	97164	468
trnV-GAC	gene	translation-rna	+	99579	99651	72
rrn16	gene	ribosomal-rna	+	99877	101368	1491
trnI-GAU	gene	translation-rna	+	101666	102686	1020
trnA-UGC	gene	translation-rna	+	102751	103639	888
rrn23	gene	ribosomal-rna	+	103808	106620	2812
rrn4.5	gene	ribosomal-rna	+	106718	106821	103
rrn5	gene	ribosomal-rna	+	107068	107189	121
trnR-ACG	gene	translation-rna	+	107423	107497	74
trnN-GUU	gene	translation-rna	+	108045	108117	72
ndhF	gene	nad-dehydrogenase	−	109173	111435	2262
rpl32	gene	ribosomal-protein	+	111762	111939	177
trnL-UAG	gene	translation-rna	+	112386	112466	80
ccsA	gene	other	+	112554	113529	975
ndhD	gene	nad-dehydrogenase	−	113785	115315	1530
psaC	gene	photosystem-i	−	115415	115661	246
ndhE	gene	nad-dehydrogenase	−	115916	116222	306
ndhG	gene	nad-dehydrogenase	−	116438	116969	531
ndhI	gene	nad-dehydrogenase	−	117335	117836	501
ndhA	gene	nad-dehydrogenase	−	117921	120043	2122
ndhH	gene	nad-dehydrogenase	−	120044	121226	1182
rps15	gene	ribosomal-protein	−	121322	121595	273
ycf1	gene	other	−	121790	127316	5526
trnN-GUU	gene	translation-rna	+	127645	127717	72
trnR-ACG	gene	translation-rna	−	128265	128339	74
rrn5	gene	ribosomal-rna	−	128573	128694	121
rrn4.5	gene	ribosomal-rna	−	128941	129044	103
rrn23	gene	ribosomal-rna	−	129142	131954	2812
trnA-UGC	gene	translation-rna	−	132123	133011	888
trnI-GAU	gene	translation-rna	−	133076	134096	1020
rrn16	gene	ribosomal-rna	−	134394	135885	1491
trnV-GAC	gene	translation-rna	−	136111	136183	72
rps7	gene	ribosomal-protein	+	138598	139066	468
ndhB	gene	nad-dehydrogenase	+	139340	141552	2212
trnL-CAA	gene	translation-rna	+	142094	142175	81
ycf15	gene	other	−	142434	142632	198
ycf2	gene	other	−	142773	149574	6801
trnI-CAU	gene	translation-rna	+	149662	149736	74
rpl23	gene	ribosomal-protein	+	149895	150177	282
rpl2	gene	ribosomal-protein	+	150195	151677	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW420943.1DNA · accDMW420943DNA · atpBMW420943DNA · matKMW420943DNA · ndhFMW420943DNA · psbAMW420943DNA · rbcLMW420943DNA · rps12MW420943DNA · ycf1MW420943