Coordinate-aware organelle record

Scutellaria tuberosa chloroplast genome

Available PQ059352.1 152,229 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	363	1422	1059
trnK-UUU	gene	translation-rna	−	1662	4250	2588
matK	gene	other	−	1957	3493	1536
rps16	gene	ribosomal-protein	−	5156	6413	1257
trnQ-UUG	gene	translation-rna	−	7168	7240	72
psbK	gene	photosystem-ii	+	7564	7750	186
psbI	gene	photosystem-ii	+	8140	8251	111
trnS-GCU	gene	translation-rna	−	8367	8455	88
trnG-UCC	gene	translation-rna	+	9143	9895	752
trnR-UCU	gene	translation-rna	+	10069	10141	72
atpA	gene	atp-synthase	−	10237	11761	1524
atpF	gene	atp-synthase	−	11834	13061	1227
atpH	gene	atp-synthase	−	13418	13664	246
atpI	gene	atp-synthase	−	14666	15410	744
rps2	gene	ribosomal-protein	−	15750	16461	711
rpoC2	gene	rna-polymerase	−	16677	20883	4206
rpoC1	gene	rna-polymerase	−	21037	23866	2829
rpoB	gene	rna-polymerase	−	23892	27105	3213
trnC-GCA	gene	translation-rna	+	28275	28346	71
petN	gene	cytochrome	+	29059	29149	90
psbM	gene	photosystem-ii	−	30228	30342	114
trnD-GUC	gene	translation-rna	−	30867	30941	74
trnY-GUA	gene	translation-rna	−	31054	31138	84
trnE-UUC	gene	translation-rna	−	31197	31270	73
trnT-GGU	gene	translation-rna	+	31845	31917	72
psbD	gene	photosystem-ii	+	33240	34302	1062
psbC	gene	photosystem-ii	+	34249	35671	1422
trnS-UGA	gene	translation-rna	−	35905	35997	92
psbZ	gene	photosystem-ii	+	36317	36506	189
trnG-GCC	gene	translation-rna	+	36777	36848	71
trnfM-CAU	gene	translation-rna	−	36999	37073	74
rps14	gene	ribosomal-protein	−	37222	37525	303
psaB	gene	photosystem-i	−	37650	39855	2205
psaA	gene	photosystem-i	−	39880	42133	2253
ycf3	gene	other	−	42806	44730	1924
trnS-GGA	gene	translation-rna	+	45614	45701	87
rps4	gene	ribosomal-protein	−	45986	46592	606
trnT-UGU	gene	translation-rna	−	46929	47002	73
trnL-UAA	gene	translation-rna	+	47680	48249	569
trnF-GAA	gene	translation-rna	+	48554	48627	73
ndhJ	gene	nad-dehydrogenase	−	49275	49752	477
ndhK	gene	nad-dehydrogenase	−	49859	50537	678
ndhC	gene	nad-dehydrogenase	−	50589	50952	363
trnV-UAC	gene	translation-rna	−	51950	52603	653
trnM-CAU	gene	translation-rna	+	52784	52857	73
atpE	gene	atp-synthase	−	53066	53468	402
atpB	gene	atp-synthase	−	53464	54952	1488
rbcL	gene	other	+	55702	57166	1464
accD	gene	other	+	57895	59362	1467
psaI	gene	photosystem-i	+	60067	60178	111
ycf4	gene	other	+	60611	61166	555
cemA	gene	other	+	61907	62507	600
petA	gene	cytochrome	+	62713	63676	963
psbJ	gene	photosystem-ii	−	64672	64795	123
psbL	gene	photosystem-ii	−	64928	65150	222
psbF	gene	photosystem-ii	−	65068	65188	120
psbE	gene	photosystem-ii	−	65202	65454	252
petL	gene	cytochrome	+	66362	66458	96
petG	gene	cytochrome	+	66633	66747	114
trnW-CCA	gene	translation-rna	−	66865	66939	74
trnP-UGG	gene	translation-rna	−	67108	67182	74
psaJ	gene	photosystem-i	+	67454	67589	135
rpl33	gene	ribosomal-protein	+	68066	68267	201
rps18	gene	ribosomal-protein	+	68441	68747	306
rpl20	gene	ribosomal-protein	−	68982	69369	387
rps12	gene	ribosomal-protein	−	70169	98292	28123
rps12	gene	ribosomal-protein	+	70169	138996	68827
clpP	gene	other	−	70424	72356	1932
psbB	gene	photosystem-ii	+	72830	74357	1527
psbT	gene	photosystem-ii	+	74559	74661	102
psbN	gene	photosystem-ii	−	74735	74867	132
psbH	gene	photosystem-ii	+	74970	75192	222
petB	gene	cytochrome	+	75316	76679	1363
petD	gene	cytochrome	+	76867	78069	1202
rpoA	gene	rna-polymerase	−	78231	79245	1014
rps11	gene	ribosomal-protein	−	79316	79733	417
rpl36	gene	ribosomal-protein	−	79834	79948	114
infA	gene	other	−	80043	80277	234
rps8	gene	ribosomal-protein	−	80397	80808	411
rpl14	gene	ribosomal-protein	−	80976	81345	369
rpl16	gene	ribosomal-protein	−	81471	82697	1226
rps3	gene	ribosomal-protein	−	82851	83514	663
rpl22	gene	ribosomal-protein	−	83515	83971	456
rps19	gene	ribosomal-protein	−	84030	84309	279
rpl2	gene	ribosomal-protein	−	84363	85846	1483
rpl23	gene	ribosomal-protein	−	85864	86146	282
trnI-CAU	gene	translation-rna	−	86305	86379	74
ycf2	gene	other	+	86467	93277	6810
ycf15	gene	other	+	93418	93616	198
trnL-CAA	gene	translation-rna	−	93871	93952	81
ndhB	gene	nad-dehydrogenase	−	94494	96706	2212
rps7	gene	ribosomal-protein	−	96980	97448	468
trnV-GAC	gene	translation-rna	+	99869	99941	72
rrn16	gene	ribosomal-rna	+	100168	101659	1491
trnI-GAU	gene	translation-rna	+	101957	102978	1021
trnA-UGC	gene	translation-rna	+	103042	103925	883
rrn23	gene	ribosomal-rna	+	104094	106907	2813
rrn4.5	gene	ribosomal-rna	+	107005	107108	103
rrn5	gene	ribosomal-rna	+	107355	107476	121
trnR-ACG	gene	translation-rna	+	107710	107784	74
trnN-GUU	gene	translation-rna	−	108330	108402	72
ndhF	gene	nad-dehydrogenase	−	109478	111725	2247
rpl32	gene	ribosomal-protein	+	112246	112423	177
trnL-UAG	gene	translation-rna	+	112843	112923	80
ccsA	gene	other	+	113016	113991	975
ndhD	gene	nad-dehydrogenase	−	114223	115726	1503
psaC	gene	photosystem-i	−	115845	116091	246
ndhE	gene	nad-dehydrogenase	−	116347	116653	306
ndhG	gene	nad-dehydrogenase	−	116873	117404	531
ndhI	gene	nad-dehydrogenase	−	117725	118226	501
ndhA	gene	nad-dehydrogenase	−	118306	120397	2091
ndhH	gene	nad-dehydrogenase	−	120398	121610	1212
rps15	gene	ribosomal-protein	−	121682	121955	273
ycf1	gene	other	−	122222	127877	5655
trnN-GUU	gene	translation-rna	+	128095	128167	72
trnR-ACG	gene	translation-rna	−	128713	128787	74
rrn5	gene	ribosomal-rna	−	129021	129142	121
rrn4.5	gene	ribosomal-rna	−	129389	129492	103
rrn23	gene	ribosomal-rna	−	129590	132403	2813
trnA-UGC	gene	translation-rna	−	132572	133455	883
trnI-GAU	gene	translation-rna	−	133519	134540	1021
ycf68	gene	other	−	134145	134385	240
rrn16	gene	ribosomal-rna	−	134838	136329	1491
trnV-GAC	gene	translation-rna	−	136556	136628	72
rps7	gene	ribosomal-protein	+	139049	139517	468
ndhB	gene	nad-dehydrogenase	+	139791	142003	2212
trnL-CAA	gene	translation-rna	+	142545	142626	81
ycf15	gene	other	−	142881	143079	198
ycf2	gene	other	−	143220	150030	6810
trnI-CAU	gene	translation-rna	+	150118	150192	74
rpl23	gene	ribosomal-protein	+	150351	150633	282
rpl2	gene	ribosomal-protein	+	150651	152134	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059352.1DNA · accDPQ059352DNA · atpBPQ059352DNA · matKPQ059352DNA · ndhFPQ059352DNA · psbAPQ059352DNA · rbcLPQ059352DNA · rps12PQ059352DNA · ycf1PQ059352