Scutellaria tuvensis chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PQ059303.1 · 4–77 bp · −
psbA · PQ059303.1 · 374–1,432 bp · −
trnK-UUU · PQ059303.1 · 1,674–4,255 bp · −
matK · PQ059303.1 · 1,964–3,490 bp · −
rps16 · PQ059303.1 · 5,157–6,315 bp · −
trnQ-UUG · PQ059303.1 · 7,079–7,150 bp · −
trnS-GCU · PQ059303.1 · 8,277–8,364 bp · −
atpA · PQ059303.1 · 10,164–11,687 bp · −
atpF · PQ059303.1 · 11,769–12,997 bp · −
atpH · PQ059303.1 · 13,358–13,603 bp · −
atpI · PQ059303.1 · 14,631–15,374 bp · −
rps2 · PQ059303.1 · 15,721–16,431 bp · −
rpoC2 · PQ059303.1 · 16,649–20,854 bp · −
rpoC1 · PQ059303.1 · 21,009–23,845 bp · −
rpoB · PQ059303.1 · 23,872–27,084 bp · −
psbM · PQ059303.1 · 30,116–30,220 bp · −
trnD-GUC · PQ059303.1 · 30,746–30,819 bp · −
trnY-GUA · PQ059303.1 · 30,933–31,016 bp · −
trnE-UUC · PQ059303.1 · 31,076–31,148 bp · −
trnS-UGA · PQ059303.1 · 35,766–35,857 bp · −
trnfM-CAU · PQ059303.1 · 36,855–36,928 bp · −
rps14 · PQ059303.1 · 37,083–37,385 bp · −
psaB · PQ059303.1 · 37,514–39,718 bp · −
psaA · PQ059303.1 · 39,744–41,996 bp · −
ycf3 · PQ059303.1 · 42,685–44,606 bp · −
rps4 · PQ059303.1 · 45,851–46,456 bp · −
trnT-UGU · PQ059303.1 · 46,800–46,872 bp · −
ndhJ · PQ059303.1 · 49,134–49,610 bp · −
ndhK · PQ059303.1 · 49,719–50,396 bp · −
ndhC · PQ059303.1 · 50,449–50,811 bp · −
trnV-UAC · PQ059303.1 · 51,797–52,449 bp · −
atpE · PQ059303.1 · 52,904–53,305 bp · −
atpB · PQ059303.1 · 53,302–54,798 bp · −
psbJ · PQ059303.1 · 64,529–64,651 bp · −
psbL · PQ059303.1 · 64,785–64,901 bp · −
psbF · PQ059303.1 · 64,925–65,044 bp · −
psbE · PQ059303.1 · 65,059–65,310 bp · −
trnW-CCA · PQ059303.1 · 66,691–66,764 bp · −
trnP-UGG · PQ059303.1 · 66,934–67,007 bp · −
rpl20 · PQ059303.1 · 68,807–69,193 bp · −
rps12 · PQ059303.1 · 69,976–70,101 bp · −
rps12 · PQ059303.1 · 97,247–98,037 bp · −
clpP · PQ059303.1 · 70,243–72,172 bp · −
psbN · PQ059303.1 · 74,510–74,641 bp · −
rpoA · PQ059303.1 · 78,182–79,003 bp · −
rps11 · PQ059303.1 · 79,075–79,491 bp · −
rpl36 · PQ059303.1 · 79,593–79,706 bp · −
infA · PQ059303.1 · 79,801–80,034 bp · −
rps8 · PQ059303.1 · 80,158–80,568 bp · −
rpl14 · PQ059303.1 · 80,720–81,088 bp · −
rpl16 · PQ059303.1 · 81,214–82,447 bp · −
rps3 · PQ059303.1 · 82,603–83,265 bp · −
rpl22 · PQ059303.1 · 83,267–83,722 bp · −
rps19 · PQ059303.1 · 83,782–84,060 bp · −
rpl2 · PQ059303.1 · 84,115–85,596 bp · −
rpl23 · PQ059303.1 · 85,615–85,896 bp · −
trnI-CAU · PQ059303.1 · 86,056–86,129 bp · −
trnL-CAA · PQ059303.1 · 93,617–93,697 bp · −
ndhB · PQ059303.1 · 94,240–96,397 bp · −
rps7 · PQ059303.1 · 96,726–97,193 bp · −
trnN-GUU · PQ059303.1 · 108,075–108,146 bp · −
ndhF · PQ059303.1 · 109,203–111,464 bp · −
ndhD · PQ059303.1 · 113,827–115,329 bp · −
psaC · PQ059303.1 · 115,457–115,702 bp · −
ndhE · PQ059303.1 · 115,958–116,263 bp · −
ndhG · PQ059303.1 · 116,480–117,010 bp · −
ndhI · PQ059303.1 · 117,377–117,877 bp · −
ndhA · PQ059303.1 · 117,963–120,084 bp · −
ndhH · PQ059303.1 · 120,086–121,297 bp · −
rps15 · PQ059303.1 · 121,364–121,636 bp · −
ycf1 · PQ059303.1 · 121,834–127,470 bp · −
trnR-ACG · PQ059303.1 · 128,309–128,382 bp · −
rrn5 · PQ059303.1 · 128,617–128,737 bp · −
rrn4.5 · PQ059303.1 · 128,985–129,087 bp · −
rrn23 · PQ059303.1 · 129,186–131,997 bp · −
trnA-UGC · PQ059303.1 · 132,167–133,054 bp · −
trnI-GAU · PQ059303.1 · 133,119–134,139 bp · −
ycf68 · PQ059303.1 · 133,691–133,984 bp · −
rrn16 · PQ059303.1 · 134,438–135,928 bp · −
trnV-GAC · PQ059303.1 · 136,155–136,226 bp · −
ycf15 · PQ059303.1 · 142,478–142,726 bp · −
ycf2 · PQ059303.1 · 142,817–149,617 bp · −
psbK · PQ059303.1 · 7,475–7,660 bp · +
psbI · PQ059303.1 · 8,050–8,160 bp · +
trnG-UCC · PQ059303.1 · 9,064–9,821 bp · +
trnR-UCU · PQ059303.1 · 9,996–10,067 bp · +
trnC-GCA · PQ059303.1 · 28,245–28,315 bp · +
petN · PQ059303.1 · 29,029–29,118 bp · +
trnT-GGU · PQ059303.1 · 31,724–31,795 bp · +
psbD · PQ059303.1 · 33,100–34,161 bp · +
psbC · PQ059303.1 · 34,109–35,530 bp · +
psbZ · PQ059303.1 · 36,173–36,361 bp · +
trnG-GCC · PQ059303.1 · 36,640–36,710 bp · +
trnS-GGA · PQ059303.1 · 45,489–45,575 bp · +
trnL-UAA · PQ059303.1 · 47,554–48,113 bp · +
trnF-GAA · PQ059303.1 · 48,415–48,487 bp · +
trnM-CAU · PQ059303.1 · 52,638–52,710 bp · +
rbcL · PQ059303.1 · 55,549–57,012 bp · +
accD · PQ059303.1 · 57,726–59,204 bp · +
psaI · PQ059303.1 · 59,911–60,021 bp · +
ycf4 · PQ059303.1 · 60,455–61,009 bp · +
cemA · PQ059303.1 · 61,757–62,356 bp · +
petA · PQ059303.1 · 62,558–63,520 bp · +
petL · PQ059303.1 · 66,188–66,283 bp · +
petG · PQ059303.1 · 66,459–66,572 bp · +
psaJ · PQ059303.1 · 67,279–67,413 bp · +
rpl33 · PQ059303.1 · 67,892–68,092 bp · +
rps18 · PQ059303.1 · 68,267–68,572 bp · +
rps12 · PQ059303.1 · 137,798–138,588 bp · +
psbB · PQ059303.1 · 72,624–74,150 bp · +
psbT · PQ059303.1 · 74,342–74,449 bp · +
psbH · PQ059303.1 · 74,745–74,966 bp · +
petB · PQ059303.1 · 75,091–76,460 bp · +
petD · PQ059303.1 · 76,643–77,849 bp · +
ycf2 · PQ059303.1 · 86,218–93,018 bp · +
ycf15 · PQ059303.1 · 93,109–93,357 bp · +
trnV-GAC · PQ059303.1 · 99,609–99,680 bp · +
rrn16 · PQ059303.1 · 99,907–101,397 bp · +
trnI-GAU · PQ059303.1 · 101,696–102,716 bp · +
trnA-UGC · PQ059303.1 · 102,781–103,668 bp · +
rrn23 · PQ059303.1 · 103,838–106,649 bp · +
rrn4.5 · PQ059303.1 · 106,748–106,850 bp · +
rrn5 · PQ059303.1 · 107,098–107,218 bp · +
trnR-ACG · PQ059303.1 · 107,453–107,526 bp · +
rpl32 · PQ059303.1 · 111,792–111,968 bp · +
trnL-UAG · PQ059303.1 · 112,414–112,493 bp · +
ccsA · PQ059303.1 · 112,595–113,569 bp · +
trnN-GUU · PQ059303.1 · 127,689–127,760 bp · +
rps7 · PQ059303.1 · 138,642–139,109 bp · +
ndhB · PQ059303.1 · 139,438–141,595 bp · +
trnL-CAA · PQ059303.1 · 142,138–142,218 bp · +
trnI-CAU · PQ059303.1 · 149,706–149,779 bp · +
rpl23 · PQ059303.1 · 149,939–150,220 bp · +
rpl2 · PQ059303.1 · 150,239–151,720 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Scutellaria tuvensis
ANNOTATED PLASTOME
PQ059303.1
151,820 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37955 75910 113865 151820 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU ycf68 rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 4 77 74 Locate
psbA gene − 374 1432 1059 Locate
trnK-UUU gene − 1674 4255 2582 Locate
matK gene − 1964 3490 1527 Locate
rps16 gene − 5157 6315 1159 Locate
trnQ-UUG gene − 7079 7150 72 Locate
psbK gene + 7475 7660 186 Locate
psbI gene + 8050 8160 111 Locate
trnS-GCU gene − 8277 8364 88 Locate
trnG-UCC gene + 9064 9821 758 Locate
trnR-UCU gene + 9996 10067 72 Locate
atpA gene − 10164 11687 1524 Locate
atpF gene − 11769 12997 1229 Locate
atpH gene − 13358 13603 246 Locate
atpI gene − 14631 15374 744 Locate
rps2 gene − 15721 16431 711 Locate
rpoC2 gene − 16649 20854 4206 Locate
rpoC1 gene − 21009 23845 2837 Locate
rpoB gene − 23872 27084 3213 Locate
trnC-GCA gene + 28245 28315 71 Locate
petN gene + 29029 29118 90 Locate
psbM gene − 30116 30220 105 Locate
trnD-GUC gene − 30746 30819 74 Locate
trnY-GUA gene − 30933 31016 84 Locate
trnE-UUC gene − 31076 31148 73 Locate
trnT-GGU gene + 31724 31795 72 Locate
psbD gene + 33100 34161 1062 Locate
psbC gene + 34109 35530 1422 Locate
trnS-UGA gene − 35766 35857 92 Locate
psbZ gene + 36173 36361 189 Locate
trnG-GCC gene + 36640 36710 71 Locate
trnfM-CAU gene − 36855 36928 74 Locate
rps14 gene − 37083 37385 303 Locate
psaB gene − 37514 39718 2205 Locate
psaA gene − 39744 41996 2253 Locate
ycf3 gene − 42685 44606 1922 Locate
trnS-GGA gene + 45489 45575 87 Locate
rps4 gene − 45851 46456 606 Locate
trnT-UGU gene − 46800 46872 73 Locate
trnL-UAA gene + 47554 48113 560 Locate
trnF-GAA gene + 48415 48487 73 Locate
ndhJ gene − 49134 49610 477 Locate
ndhK gene − 49719 50396 678 Locate
ndhC gene − 50449 50811 363 Locate
trnV-UAC gene − 51797 52449 653 Locate
trnM-CAU gene + 52638 52710 73 Locate
atpE gene − 52904 53305 402 Locate
atpB gene − 53302 54798 1497 Locate
rbcL gene + 55549 57012 1464 Locate
accD gene + 57726 59204 1479 Locate
psaI gene + 59911 60021 111 Locate
ycf4 gene + 60455 61009 555 Locate
cemA gene + 61757 62356 600 Locate
petA gene + 62558 63520 963 Locate
psbJ gene − 64529 64651 123 Locate
psbL gene − 64785 64901 117 Locate
psbF gene − 64925 65044 120 Locate
psbE gene − 65059 65310 252 Locate
petL gene + 66188 66283 96 Locate
petG gene + 66459 66572 114 Locate
trnW-CCA gene − 66691 66764 74 Locate
trnP-UGG gene − 66934 67007 74 Locate
psaJ gene + 67279 67413 135 Locate
rpl33 gene + 67892 68092 201 Locate
rps18 gene + 68267 68572 306 Locate
rpl20 gene − 68807 69193 387 Locate
rps12 gene − 69976 70101 126 Locate
clpP gene − 70243 72172 1930 Locate
psbB gene + 72624 74150 1527 Locate
psbT gene + 74342 74449 108 Locate
psbN gene − 74510 74641 132 Locate
psbH gene + 74745 74966 222 Locate
petB gene + 75091 76460 1370 Locate
petD gene + 76643 77849 1207 Locate
rpoA gene − 78182 79003 822 Locate
rps11 gene − 79075 79491 417 Locate
rpl36 gene − 79593 79706 114 Locate
infA gene − 79801 80034 234 Locate
rps8 gene − 80158 80568 411 Locate
rpl14 gene − 80720 81088 369 Locate
rpl16 gene − 81214 82447 1234 Locate
rps3 gene − 82603 83265 663 Locate
rpl22 gene − 83267 83722 456 Locate
rps19 gene − 83782 84060 279 Locate
rpl2 gene − 84115 85596 1482 Locate
rpl23 gene − 85615 85896 282 Locate
trnI-CAU gene − 86056 86129 74 Locate
ycf2 gene + 86218 93018 6801 Locate
ycf15 gene + 93109 93357 249 Locate
trnL-CAA gene − 93617 93697 81 Locate
ndhB gene − 94240 96397 2158 Locate
rps7 gene − 96726 97193 468 Locate
rps12 gene − 97247 98037 791 Locate
trnV-GAC gene + 99609 99680 72 Locate
rrn16 gene + 99907 101397 1491 Locate
trnI-GAU gene + 101696 102716 1021 Locate
trnA-UGC gene + 102781 103668 888 Locate
rrn23 gene + 103838 106649 2812 Locate
rrn4.5 gene + 106748 106850 103 Locate
rrn5 gene + 107098 107218 121 Locate
trnR-ACG gene + 107453 107526 74 Locate
trnN-GUU gene − 108075 108146 72 Locate
ndhF gene − 109203 111464 2262 Locate
rpl32 gene + 111792 111968 177 Locate
trnL-UAG gene + 112414 112493 80 Locate
ccsA gene + 112595 113569 975 Locate
ndhD gene − 113827 115329 1503 Locate
psaC gene − 115457 115702 246 Locate
ndhE gene − 115958 116263 306 Locate
ndhG gene − 116480 117010 531 Locate
ndhI gene − 117377 117877 501 Locate
ndhA gene − 117963 120084 2122 Locate
ndhH gene − 120086 121297 1212 Locate
rps15 gene − 121364 121636 273 Locate
ycf1 gene − 121834 127470 5637 Locate
trnN-GUU gene + 127689 127760 72 Locate
trnR-ACG gene − 128309 128382 74 Locate
rrn5 gene − 128617 128737 121 Locate
rrn4.5 gene − 128985 129087 103 Locate
rrn23 gene − 129186 131997 2812 Locate
trnA-UGC gene − 132167 133054 888 Locate
trnI-GAU gene − 133119 134139 1021 Locate
ycf68 gene − 133691 133984 294 Locate
rrn16 gene − 134438 135928 1491 Locate
trnV-GAC gene − 136155 136226 72 Locate
rps12 gene + 137798 138588 791 Locate
rps7 gene + 138642 139109 468 Locate
ndhB gene + 139438 141595 2158 Locate
trnL-CAA gene + 142138 142218 81 Locate
ycf15 gene − 142478 142726 249 Locate
ycf2 gene − 142817 149617 6801 Locate
trnI-CAU gene + 149706 149779 74 Locate
rpl23 gene + 149939 150220 282 Locate
rpl2 gene + 150239 151720 1482 Locate
Status Available
Accession PQ059303.1
Length 151,820 bp
GC content 38.3%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources