Coordinate-aware organelle record

Scutellaria uliginosa chloroplast genome

Available PQ058274.1 151,732 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	376	1435	1059
trnK-UUU	gene	translation-rna	−	1680	4260	2580
matK	gene	other	−	1967	3503	1536
rps16	gene	ribosomal-protein	−	5176	6304	1128
trnQ-UUG	gene	translation-rna	−	7437	7509	72
psbK	gene	photosystem-ii	+	7833	8019	186
psbI	gene	photosystem-ii	+	8413	8524	111
trnS-GCU	gene	translation-rna	−	8626	8714	88
trnG-UCC	gene	translation-rna	+	9393	10152	759
trnR-UCU	gene	translation-rna	+	10326	10398	72
atpA	gene	atp-synthase	−	10494	12018	1524
atpF	gene	atp-synthase	−	12100	13330	1230
atpH	gene	atp-synthase	−	13693	13939	246
atpI	gene	atp-synthase	−	14933	15677	744
rps2	gene	ribosomal-protein	−	16019	16730	711
rpoC2	gene	rna-polymerase	−	16945	21151	4206
rpoC1	gene	rna-polymerase	−	21296	24132	2836
rpoB	gene	rna-polymerase	−	24158	27371	3213
trnC-GCA	gene	translation-rna	+	28529	28600	71
petN	gene	cytochrome	+	29302	29392	90
psbM	gene	photosystem-ii	−	30415	30529	114
trnD-GUC	gene	translation-rna	−	31047	31121	74
trnY-GUA	gene	translation-rna	−	31234	31318	84
trnE-UUC	gene	translation-rna	−	31377	31450	73
trnT-GGU	gene	translation-rna	+	32013	32085	72
psbD	gene	photosystem-ii	+	33393	34455	1062
psbC	gene	photosystem-ii	+	34402	35824	1422
trnS-UGA	gene	translation-rna	−	36061	36153	92
psbZ	gene	photosystem-ii	+	36472	36661	189
trnG-GCC	gene	translation-rna	+	36932	37003	71
trnfM-CAU	gene	translation-rna	−	37147	37221	74
rps14	gene	ribosomal-protein	−	37370	37673	303
psaB	gene	photosystem-i	−	37799	40004	2205
psaA	gene	photosystem-i	−	40029	42282	2253
ycf3	gene	other	−	42981	44904	1923
trnS-GGA	gene	translation-rna	+	45777	45864	87
rps4	gene	ribosomal-protein	−	46147	46753	606
trnT-UGU	gene	translation-rna	−	47088	47161	73
trnL-UAA	gene	translation-rna	+	47841	48407	566
trnF-GAA	gene	translation-rna	+	48690	48763	73
ndhJ	gene	nad-dehydrogenase	−	49412	49889	477
ndhK	gene	nad-dehydrogenase	−	49996	50674	678
ndhC	gene	nad-dehydrogenase	−	50726	51089	363
trnV-UAC	gene	translation-rna	−	51546	52200	654
trnM-CAU	gene	translation-rna	+	52380	52453	73
atpE	gene	atp-synthase	−	52661	53063	402
atpB	gene	atp-synthase	−	53059	54556	1497
rbcL	gene	other	+	55313	56774	1461
accD	gene	other	+	57495	58974	1479
psaI	gene	photosystem-i	+	59689	59800	111
ycf4	gene	other	+	60233	60788	555
cemA	gene	other	+	61528	62128	600
petA	gene	cytochrome	+	62334	63297	963
psbJ	gene	photosystem-ii	−	64324	64447	123
psbL	gene	photosystem-ii	−	64581	64803	222
psbF	gene	photosystem-ii	−	64721	64841	120
psbE	gene	photosystem-ii	−	64855	65107	252
petL	gene	cytochrome	+	66014	66110	96
petG	gene	cytochrome	+	66285	66399	114
trnW-CCA	gene	translation-rna	−	66508	66582	74
trnP-UGG	gene	translation-rna	−	66751	66825	74
psaJ	gene	photosystem-i	+	67098	67233	135
rpl33	gene	ribosomal-protein	+	67720	67921	201
rps18	gene	ribosomal-protein	+	68117	68423	306
rpl20	gene	ribosomal-protein	−	68661	69048	387
rps12	gene	ribosomal-protein	−	69832	97871	28039
rps12	gene	ribosomal-protein	+	69832	138503	68671
clpP	gene	other	−	70098	72044	1946
psbB	gene	photosystem-ii	+	72506	74033	1527
psbT	gene	photosystem-ii	+	74228	74336	108
psbN	gene	photosystem-ii	−	74397	74529	132
psbH	gene	photosystem-ii	+	74632	74854	222
petB	gene	cytochrome	+	74979	76306	1327
petD	gene	cytochrome	+	76494	77705	1211
rpoA	gene	rna-polymerase	−	77867	78875	1008
rps11	gene	ribosomal-protein	−	78946	79363	417
rpl36	gene	ribosomal-protein	−	79463	79577	114
infA	gene	other	−	79672	79906	234
rps8	gene	ribosomal-protein	−	80021	80432	411
rpl14	gene	ribosomal-protein	−	80598	80967	369
rpl16	gene	ribosomal-protein	−	81078	82329	1251
rps3	gene	ribosomal-protein	−	82433	83096	663
rpl22	gene	ribosomal-protein	−	83122	83554	432
rps19	gene	ribosomal-protein	−	83613	83892	279
rpl2	gene	ribosomal-protein	−	83946	85429	1483
rpl23	gene	ribosomal-protein	−	85447	85729	282
trnI-CAU	gene	translation-rna	−	85888	85962	74
ycf2	gene	other	+	86050	92860	6810
ycf15	gene	other	+	93001	93199	198
trnL-CAA	gene	translation-rna	−	93459	93540	81
ndhB	gene	nad-dehydrogenase	−	94073	96231	2158
rps7	gene	ribosomal-protein	−	96559	97027	468
trnV-GAC	gene	translation-rna	+	99447	99519	72
rrn16	gene	ribosomal-rna	+	99746	101237	1491
trnI-GAU	gene	translation-rna	+	101535	102555	1020
trnA-UGC	gene	translation-rna	+	102619	103504	885
rrn23	gene	ribosomal-rna	+	103673	106486	2813
rrn4.5	gene	ribosomal-rna	+	106584	106687	103
rrn5	gene	ribosomal-rna	+	106934	107055	121
trnR-ACG	gene	translation-rna	+	107289	107363	74
trnN-GUU	gene	translation-rna	−	107919	107991	72
ndhF	gene	nad-dehydrogenase	−	109067	111299	2232
rpl32	gene	ribosomal-protein	+	111820	111997	177
trnL-UAG	gene	translation-rna	+	112431	112511	80
ccsA	gene	other	+	112609	113584	975
ndhD	gene	nad-dehydrogenase	−	113808	115311	1503
psaC	gene	photosystem-i	−	115438	115684	246
ndhE	gene	nad-dehydrogenase	−	115922	116228	306
ndhG	gene	nad-dehydrogenase	−	116449	116980	531
ndhI	gene	nad-dehydrogenase	−	117332	117833	501
ndhA	gene	nad-dehydrogenase	−	117913	120012	2099
ndhH	gene	nad-dehydrogenase	−	120013	121225	1212
rps15	gene	ribosomal-protein	−	121283	121556	273
ycf1	gene	other	−	121842	127263	5421
trnN-GUU	gene	translation-rna	+	127592	127664	72
trnR-ACG	gene	translation-rna	−	128220	128294	74
rrn5	gene	ribosomal-rna	−	128528	128649	121
rrn4.5	gene	ribosomal-rna	−	128896	128999	103
rrn23	gene	ribosomal-rna	−	129097	131910	2813
trnA-UGC	gene	translation-rna	−	132079	132964	885
trnI-GAU	gene	translation-rna	−	133028	134048	1020
ycf68	gene	other	−	133599	133893	294
rrn16	gene	ribosomal-rna	−	134346	135837	1491
trnV-GAC	gene	translation-rna	−	136064	136136	72
rps7	gene	ribosomal-protein	+	138556	139024	468
ndhB	gene	nad-dehydrogenase	+	139352	141510	2158
trnL-CAA	gene	translation-rna	+	142043	142124	81
ycf15	gene	other	−	142384	142582	198
ycf2	gene	other	−	142723	149533	6810
trnI-CAU	gene	translation-rna	+	149621	149695	74
rpl23	gene	ribosomal-protein	+	149854	150136	282
rpl2	gene	ribosomal-protein	+	150154	151637	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ058274.1DNA · accDPQ058274DNA · atpBPQ058274DNA · matKPQ058274DNA · ndhFPQ058274DNA · psbAPQ058274DNA · rbcLPQ058274DNA · rps12PQ058274DNA · ycf1PQ058274