Scutellaria ventenatii chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PQ058273.1 · 3–76 bp · −
psbA · PQ058273.1 · 374–1,432 bp · −
trnK-UUU · PQ058273.1 · 1,673–4,271 bp · −
matK · PQ058273.1 · 1,970–3,514 bp · −
rps16 · PQ058273.1 · 5,191–6,316 bp · −
trnQ-UUG · PQ058273.1 · 7,447–7,518 bp · −
trnS-GCU · PQ058273.1 · 8,645–8,732 bp · −
atpA · PQ058273.1 · 10,521–12,044 bp · −
atpF · PQ058273.1 · 12,127–13,356 bp · −
atpH · PQ058273.1 · 13,719–13,964 bp · −
atpI · PQ058273.1 · 14,954–15,697 bp · −
rps2 · PQ058273.1 · 16,040–16,750 bp · −
rpoC2 · PQ058273.1 · 16,974–21,185 bp · −
rpoC1 · PQ058273.1 · 21,331–24,166 bp · −
rpoB · PQ058273.1 · 24,193–27,405 bp · −
psbM · PQ058273.1 · 30,469–30,582 bp · −
trnD-GUC · PQ058273.1 · 31,109–31,182 bp · −
trnY-GUA · PQ058273.1 · 31,296–31,379 bp · −
trnE-UUC · PQ058273.1 · 31,439–31,511 bp · −
trnS-UGA · PQ058273.1 · 36,128–36,219 bp · −
trnfM-CAU · PQ058273.1 · 37,213–37,286 bp · −
rps14 · PQ058273.1 · 37,436–37,738 bp · −
psaB · PQ058273.1 · 37,866–40,070 bp · −
psaA · PQ058273.1 · 40,096–42,348 bp · −
ycf3 · PQ058273.1 · 43,046–44,968 bp · −
rps4 · PQ058273.1 · 46,225–46,830 bp · −
trnT-UGU · PQ058273.1 · 47,172–47,244 bp · −
ndhJ · PQ058273.1 · 49,482–49,958 bp · −
ndhK · PQ058273.1 · 50,066–50,827 bp · −
ndhC · PQ058273.1 · 50,797–51,159 bp · −
trnV-UAC · PQ058273.1 · 51,602–52,255 bp · −
atpE · PQ058273.1 · 52,722–53,123 bp · −
atpB · PQ058273.1 · 53,120–54,616 bp · −
psbJ · PQ058273.1 · 64,365–64,487 bp · −
psbL · PQ058273.1 · 64,622–64,738 bp · −
psbF · PQ058273.1 · 64,762–64,881 bp · −
psbE · PQ058273.1 · 64,896–65,147 bp · −
trnW-CCA · PQ058273.1 · 66,549–66,622 bp · −
trnP-UGG · PQ058273.1 · 66,792–66,865 bp · −
rpl20 · PQ058273.1 · 68,677–69,063 bp · −
rps12 · PQ058273.1 · 69,855–69,980 bp · −
rps12 · PQ058273.1 · 97,209–97,999 bp · −
clpP · PQ058273.1 · 70,121–72,063 bp · −
psbN · PQ058273.1 · 74,419–74,550 bp · −
rpoA · PQ058273.1 · 77,933–78,943 bp · −
rps11 · PQ058273.1 · 79,015–79,431 bp · −
rpl36 · PQ058273.1 · 79,532–79,645 bp · −
infA · PQ058273.1 · 79,741–79,974 bp · −
rps8 · PQ058273.1 · 80,092–80,502 bp · −
rpl14 · PQ058273.1 · 80,664–81,032 bp · −
rpl16 · PQ058273.1 · 81,144–82,398 bp · −
rps3 · PQ058273.1 · 82,553–83,215 bp · −
rpl22 · PQ058273.1 · 83,242–83,682 bp · −
rps19 · PQ058273.1 · 83,742–84,020 bp · −
rpl2 · PQ058273.1 · 84,075–85,557 bp · −
rpl23 · PQ058273.1 · 85,576–85,857 bp · −
trnI-CAU · PQ058273.1 · 86,017–86,090 bp · −
trnL-CAA · PQ058273.1 · 93,588–93,668 bp · −
ndhB · PQ058273.1 · 94,202–96,413 bp · −
rps7 · PQ058273.1 · 96,688–97,155 bp · −
trnN-GUU · PQ058273.1 · 108,134–108,205 bp · −
ndhF · PQ058273.1 · 109,282–111,513 bp · −
ndhD · PQ058273.1 · 114,035–115,564 bp · −
psaC · PQ058273.1 · 115,664–115,909 bp · −
ndhE · PQ058273.1 · 116,148–116,453 bp · −
ndhG · PQ058273.1 · 116,675–117,205 bp · −
ndhI · PQ058273.1 · 117,567–118,067 bp · −
ndhA · PQ058273.1 · 118,148–120,249 bp · −
ndhH · PQ058273.1 · 120,251–121,432 bp · −
rps15 · PQ058273.1 · 121,521–121,793 bp · −
ycf1 · PQ058273.1 · 122,080–127,614 bp · −
trnR-ACG · PQ058273.1 · 128,545–128,618 bp · −
rrn5 · PQ058273.1 · 128,853–128,973 bp · −
rrn4.5 · PQ058273.1 · 129,221–129,323 bp · −
rrn23 · PQ058273.1 · 129,422–132,234 bp · −
trnA-UGC · PQ058273.1 · 132,404–133,291 bp · −
trnI-GAU · PQ058273.1 · 133,356–134,380 bp · −
ycf68 · PQ058273.1 · 133,932–134,225 bp · −
rrn16 · PQ058273.1 · 134,679–136,169 bp · −
trnV-GAC · PQ058273.1 · 136,397–136,468 bp · −
ycf15 · PQ058273.1 · 142,711–142,908 bp · −
ycf2 · PQ058273.1 · 143,050–149,859 bp · −
psbK · PQ058273.1 · 7,843–8,028 bp · +
psbI · PQ058273.1 · 8,423–8,533 bp · +
trnG-UCC · PQ058273.1 · 9,421–10,178 bp · +
trnR-UCU · PQ058273.1 · 10,353–10,424 bp · +
trnC-GCA · PQ058273.1 · 28,564–28,634 bp · +
petN · PQ058273.1 · 29,350–29,439 bp · +
trnT-GGU · PQ058273.1 · 32,075–32,146 bp · +
psbD · PQ058273.1 · 33,454–34,515 bp · +
psbC · PQ058273.1 · 34,463–35,884 bp · +
psbZ · PQ058273.1 · 36,539–36,727 bp · +
trnG-GCC · PQ058273.1 · 36,999–37,069 bp · +
trnS-GGA · PQ058273.1 · 45,855–45,941 bp · +
trnL-UAA · PQ058273.1 · 47,919–48,485 bp · +
trnF-GAA · PQ058273.1 · 48,767–48,839 bp · +
trnM-CAU · PQ058273.1 · 52,441–52,513 bp · +
rbcL · PQ058273.1 · 55,374–56,834 bp · +
accD · PQ058273.1 · 57,551–59,029 bp · +
psaI · PQ058273.1 · 59,734–59,844 bp · +
ycf4 · PQ058273.1 · 60,278–60,832 bp · +
cemA · PQ058273.1 · 61,573–62,172 bp · +
petA · PQ058273.1 · 62,379–63,341 bp · +
petL · PQ058273.1 · 66,053–66,148 bp · +
petG · PQ058273.1 · 66,326–66,439 bp · +
psaJ · PQ058273.1 · 67,138–67,272 bp · +
rpl33 · PQ058273.1 · 67,760–67,960 bp · +
rps18 · PQ058273.1 · 68,136–68,441 bp · +
rps12 · PQ058273.1 · 138,039–138,829 bp · +
psbB · PQ058273.1 · 72,531–74,057 bp · +
psbT · PQ058273.1 · 74,250–74,357 bp · +
psbH · PQ058273.1 · 74,654–74,875 bp · +
petB · PQ058273.1 · 75,001–76,370 bp · +
petD · PQ058273.1 · 76,559–77,770 bp · +
ycf2 · PQ058273.1 · 86,179–92,988 bp · +
ycf15 · PQ058273.1 · 93,130–93,327 bp · +
trnV-GAC · PQ058273.1 · 99,570–99,641 bp · +
rrn16 · PQ058273.1 · 99,869–101,359 bp · +
trnI-GAU · PQ058273.1 · 101,658–102,682 bp · +
trnA-UGC · PQ058273.1 · 102,747–103,634 bp · +
rrn23 · PQ058273.1 · 103,804–106,616 bp · +
rrn4.5 · PQ058273.1 · 106,715–106,817 bp · +
rrn5 · PQ058273.1 · 107,065–107,185 bp · +
trnR-ACG · PQ058273.1 · 107,420–107,493 bp · +
rpl32 · PQ058273.1 · 112,038–112,214 bp · +
trnL-UAG · PQ058273.1 · 112,649–112,728 bp · +
ccsA · PQ058273.1 · 112,831–113,805 bp · +
trnN-GUU · PQ058273.1 · 127,833–127,904 bp · +
rps7 · PQ058273.1 · 138,883–139,350 bp · +
ndhB · PQ058273.1 · 139,625–141,836 bp · +
trnL-CAA · PQ058273.1 · 142,370–142,450 bp · +
trnI-CAU · PQ058273.1 · 149,948–150,021 bp · +
rpl23 · PQ058273.1 · 150,181–150,462 bp · +
rpl2 · PQ058273.1 · 150,481–151,963 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Scutellaria ventenatii
ANNOTATED PLASTOME
PQ058273.1
152,058 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38014 76029 114044 152058 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU ycf68 rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 3 76 74 Locate
psbA gene − 374 1432 1059 Locate
trnK-UUU gene − 1673 4271 2599 Locate
matK gene − 1970 3514 1545 Locate
rps16 gene − 5191 6316 1126 Locate
trnQ-UUG gene − 7447 7518 72 Locate
psbK gene + 7843 8028 186 Locate
psbI gene + 8423 8533 111 Locate
trnS-GCU gene − 8645 8732 88 Locate
trnG-UCC gene + 9421 10178 758 Locate
trnR-UCU gene + 10353 10424 72 Locate
atpA gene − 10521 12044 1524 Locate
atpF gene − 12127 13356 1230 Locate
atpH gene − 13719 13964 246 Locate
atpI gene − 14954 15697 744 Locate
rps2 gene − 16040 16750 711 Locate
rpoC2 gene − 16974 21185 4212 Locate
rpoC1 gene − 21331 24166 2836 Locate
rpoB gene − 24193 27405 3213 Locate
trnC-GCA gene + 28564 28634 71 Locate
petN gene + 29350 29439 90 Locate
psbM gene − 30469 30582 114 Locate
trnD-GUC gene − 31109 31182 74 Locate
trnY-GUA gene − 31296 31379 84 Locate
trnE-UUC gene − 31439 31511 73 Locate
trnT-GGU gene + 32075 32146 72 Locate
psbD gene + 33454 34515 1062 Locate
psbC gene + 34463 35884 1422 Locate
trnS-UGA gene − 36128 36219 92 Locate
psbZ gene + 36539 36727 189 Locate
trnG-GCC gene + 36999 37069 71 Locate
trnfM-CAU gene − 37213 37286 74 Locate
rps14 gene − 37436 37738 303 Locate
psaB gene − 37866 40070 2205 Locate
psaA gene − 40096 42348 2253 Locate
ycf3 gene − 43046 44968 1923 Locate
trnS-GGA gene + 45855 45941 87 Locate
rps4 gene − 46225 46830 606 Locate
trnT-UGU gene − 47172 47244 73 Locate
trnL-UAA gene + 47919 48485 567 Locate
trnF-GAA gene + 48767 48839 73 Locate
ndhJ gene − 49482 49958 477 Locate
ndhK gene − 50066 50827 762 Locate
ndhC gene − 50797 51159 363 Locate
trnV-UAC gene − 51602 52255 654 Locate
trnM-CAU gene + 52441 52513 73 Locate
atpE gene − 52722 53123 402 Locate
atpB gene − 53120 54616 1497 Locate
rbcL gene + 55374 56834 1461 Locate
accD gene + 57551 59029 1479 Locate
psaI gene + 59734 59844 111 Locate
ycf4 gene + 60278 60832 555 Locate
cemA gene + 61573 62172 600 Locate
petA gene + 62379 63341 963 Locate
psbJ gene − 64365 64487 123 Locate
psbL gene − 64622 64738 117 Locate
psbF gene − 64762 64881 120 Locate
psbE gene − 64896 65147 252 Locate
petL gene + 66053 66148 96 Locate
petG gene + 66326 66439 114 Locate
trnW-CCA gene − 66549 66622 74 Locate
trnP-UGG gene − 66792 66865 74 Locate
psaJ gene + 67138 67272 135 Locate
rpl33 gene + 67760 67960 201 Locate
rps18 gene + 68136 68441 306 Locate
rpl20 gene − 68677 69063 387 Locate
rps12 gene − 69855 69980 126 Locate
clpP gene − 70121 72063 1943 Locate
psbB gene + 72531 74057 1527 Locate
psbT gene + 74250 74357 108 Locate
psbN gene − 74419 74550 132 Locate
psbH gene + 74654 74875 222 Locate
petB gene + 75001 76370 1370 Locate
petD gene + 76559 77770 1212 Locate
rpoA gene − 77933 78943 1011 Locate
rps11 gene − 79015 79431 417 Locate
rpl36 gene − 79532 79645 114 Locate
infA gene − 79741 79974 234 Locate
rps8 gene − 80092 80502 411 Locate
rpl14 gene − 80664 81032 369 Locate
rpl16 gene − 81144 82398 1255 Locate
rps3 gene − 82553 83215 663 Locate
rpl22 gene − 83242 83682 441 Locate
rps19 gene − 83742 84020 279 Locate
rpl2 gene − 84075 85557 1483 Locate
rpl23 gene − 85576 85857 282 Locate
trnI-CAU gene − 86017 86090 74 Locate
ycf2 gene + 86179 92988 6810 Locate
ycf15 gene + 93130 93327 198 Locate
trnL-CAA gene − 93588 93668 81 Locate
ndhB gene − 94202 96413 2212 Locate
rps7 gene − 96688 97155 468 Locate
rps12 gene − 97209 97999 791 Locate
trnV-GAC gene + 99570 99641 72 Locate
rrn16 gene + 99869 101359 1491 Locate
trnI-GAU gene + 101658 102682 1025 Locate
trnA-UGC gene + 102747 103634 888 Locate
rrn23 gene + 103804 106616 2813 Locate
rrn4.5 gene + 106715 106817 103 Locate
rrn5 gene + 107065 107185 121 Locate
trnR-ACG gene + 107420 107493 74 Locate
trnN-GUU gene − 108134 108205 72 Locate
ndhF gene − 109282 111513 2232 Locate
rpl32 gene + 112038 112214 177 Locate
trnL-UAG gene + 112649 112728 80 Locate
ccsA gene + 112831 113805 975 Locate
ndhD gene − 114035 115564 1530 Locate
psaC gene − 115664 115909 246 Locate
ndhE gene − 116148 116453 306 Locate
ndhG gene − 116675 117205 531 Locate
ndhI gene − 117567 118067 501 Locate
ndhA gene − 118148 120249 2102 Locate
ndhH gene − 120251 121432 1182 Locate
rps15 gene − 121521 121793 273 Locate
ycf1 gene − 122080 127614 5535 Locate
trnN-GUU gene + 127833 127904 72 Locate
trnR-ACG gene − 128545 128618 74 Locate
rrn5 gene − 128853 128973 121 Locate
rrn4.5 gene − 129221 129323 103 Locate
rrn23 gene − 129422 132234 2813 Locate
trnA-UGC gene − 132404 133291 888 Locate
trnI-GAU gene − 133356 134380 1025 Locate
ycf68 gene − 133932 134225 294 Locate
rrn16 gene − 134679 136169 1491 Locate
trnV-GAC gene − 136397 136468 72 Locate
rps12 gene + 138039 138829 791 Locate
rps7 gene + 138883 139350 468 Locate
ndhB gene + 139625 141836 2212 Locate
trnL-CAA gene + 142370 142450 81 Locate
ycf15 gene − 142711 142908 198 Locate
ycf2 gene − 143050 149859 6810 Locate
trnI-CAU gene + 149948 150021 74 Locate
rpl23 gene + 150181 150462 282 Locate
rpl2 gene + 150481 151963 1483 Locate
Status Available
Accession PQ058273.1
Length 152,058 bp
GC content 38.4%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources