Coordinate-aware organelle record

Scutellaria violacea var. violacea chloroplast genome

Available PQ075913.1 152,041 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	368	1427	1059
trnK-UUU	gene	translation-rna	−	1668	4257	2589
matK	gene	other	−	1963	3499	1536
rps16	gene	ribosomal-protein	−	5129	6293	1164
trnQ-UUG	gene	translation-rna	−	7304	7376	72
psbK	gene	photosystem-ii	+	7700	7886	186
psbI	gene	photosystem-ii	+	8283	8394	111
trnS-GCU	gene	translation-rna	−	8502	8590	88
trnG-UCC	gene	translation-rna	+	9272	10033	761
trnR-UCU	gene	translation-rna	+	10203	10275	72
atpA	gene	atp-synthase	−	10371	11895	1524
atpF	gene	atp-synthase	−	11977	13205	1228
atpH	gene	atp-synthase	−	13570	13816	246
atpI	gene	atp-synthase	−	14811	15555	744
rps2	gene	ribosomal-protein	−	15903	16614	711
rpoC2	gene	rna-polymerase	−	16830	21036	4206
rpoC1	gene	rna-polymerase	−	21190	24023	2833
rpoB	gene	rna-polymerase	−	24049	27262	3213
trnC-GCA	gene	translation-rna	+	28432	28503	71
petN	gene	cytochrome	+	29214	29304	90
psbM	gene	photosystem-ii	−	30335	30440	105
trnD-GUC	gene	translation-rna	−	30966	31040	74
trnY-GUA	gene	translation-rna	−	31153	31237	84
trnE-UUC	gene	translation-rna	−	31296	31369	73
trnT-GGU	gene	translation-rna	+	31944	32016	72
psbD	gene	photosystem-ii	+	33320	34382	1062
psbC	gene	photosystem-ii	+	34329	35751	1422
trnS-UGA	gene	translation-rna	−	35986	36078	92
psbZ	gene	photosystem-ii	+	36397	36586	189
trnG-GCC	gene	translation-rna	+	36857	36928	71
trnfM-CAU	gene	translation-rna	−	37071	37145	74
rps14	gene	ribosomal-protein	−	37294	37597	303
psaB	gene	photosystem-i	−	37724	39929	2205
psaA	gene	photosystem-i	−	39954	42207	2253
ycf3	gene	other	−	42874	44797	1923
trnS-GGA	gene	translation-rna	+	45681	45768	87
rps4	gene	ribosomal-protein	−	46053	46659	606
trnT-UGU	gene	translation-rna	−	47000	47073	73
trnL-UAA	gene	translation-rna	+	47757	48318	561
trnF-GAA	gene	translation-rna	+	48625	48698	73
ndhJ	gene	nad-dehydrogenase	−	49346	49823	477
ndhK	gene	nad-dehydrogenase	−	49930	50692	762
ndhC	gene	nad-dehydrogenase	−	50661	51024	363
trnV-UAC	gene	translation-rna	−	51879	52532	653
trnM-CAU	gene	translation-rna	+	52712	52785	73
atpE	gene	atp-synthase	−	53000	53402	402
atpB	gene	atp-synthase	−	53398	54886	1488
rbcL	gene	other	+	55637	57101	1464
accD	gene	other	+	57834	59301	1467
psaI	gene	photosystem-i	+	59858	59969	111
ycf4	gene	other	+	60402	60957	555
cemA	gene	other	+	61694	62294	600
petA	gene	cytochrome	+	62500	63463	963
psbJ	gene	photosystem-ii	−	64496	64619	123
psbL	gene	photosystem-ii	−	64752	64974	222
psbF	gene	photosystem-ii	−	64892	65012	120
psbE	gene	photosystem-ii	−	65026	65278	252
petL	gene	cytochrome	+	66186	66282	96
petG	gene	cytochrome	+	66457	66571	114
trnW-CCA	gene	translation-rna	−	66689	66763	74
trnP-UGG	gene	translation-rna	−	66932	67006	74
psaJ	gene	photosystem-i	+	67278	67413	135
rpl33	gene	ribosomal-protein	+	67886	68087	201
rps18	gene	ribosomal-protein	+	68261	68567	306
rpl20	gene	ribosomal-protein	−	68803	69190	387
rps12	gene	ribosomal-protein	−	69976	98066	28090
rps12	gene	ribosomal-protein	+	69976	138820	68844
clpP	gene	other	−	70244	72177	1933
psbB	gene	photosystem-ii	+	72621	74148	1527
psbT	gene	photosystem-ii	+	74339	74441	102
psbN	gene	photosystem-ii	−	74514	74646	132
psbH	gene	photosystem-ii	+	74749	74971	222
petB	gene	cytochrome	+	75095	76463	1368
petD	gene	cytochrome	+	76651	77853	1202
rpoA	gene	rna-polymerase	−	78015	79029	1014
rps11	gene	ribosomal-protein	−	79100	79517	417
rpl36	gene	ribosomal-protein	−	79618	79732	114
infA	gene	other	−	79827	80061	234
rps8	gene	ribosomal-protein	−	80180	80591	411
rpl14	gene	ribosomal-protein	−	80761	81130	369
rpl16	gene	ribosomal-protein	−	81256	82483	1227
rps3	gene	ribosomal-protein	−	82637	83300	663
rpl22	gene	ribosomal-protein	−	83301	83757	456
rps19	gene	ribosomal-protein	−	83816	84095	279
rpl2	gene	ribosomal-protein	−	84149	85632	1483
rpl23	gene	ribosomal-protein	−	85650	85932	282
trnI-CAU	gene	translation-rna	−	86091	86165	74
ycf2	gene	other	+	86253	93051	6798
ycf15	gene	other	+	93192	93390	198
trnL-CAA	gene	translation-rna	−	93645	93726	81
ndhB	gene	nad-dehydrogenase	−	94268	96480	2212
rps7	gene	ribosomal-protein	−	96754	97222	468
trnV-GAC	gene	translation-rna	+	99643	99715	72
rrn16	gene	ribosomal-rna	+	99942	101433	1491
trnI-GAU	gene	translation-rna	+	101731	102752	1021
trnA-UGC	gene	translation-rna	+	102816	103697	881
rrn23	gene	ribosomal-rna	+	103866	106679	2813
rrn4.5	gene	ribosomal-rna	+	106777	106880	103
rrn5	gene	ribosomal-rna	+	107127	107248	121
trnR-ACG	gene	translation-rna	+	107482	107556	74
trnN-GUU	gene	translation-rna	−	108102	108174	72
ndhF	gene	nad-dehydrogenase	−	109250	111491	2241
rpl32	gene	ribosomal-protein	+	112011	112188	177
trnL-UAG	gene	translation-rna	+	112632	112712	80
ccsA	gene	other	+	112808	113783	975
ndhD	gene	nad-dehydrogenase	−	114015	115518	1503
psaC	gene	photosystem-i	−	115637	115883	246
ndhE	gene	nad-dehydrogenase	−	116139	116445	306
ndhG	gene	nad-dehydrogenase	−	116665	117196	531
ndhI	gene	nad-dehydrogenase	−	117560	118061	501
ndhA	gene	nad-dehydrogenase	−	118141	120233	2092
ndhH	gene	nad-dehydrogenase	−	120234	121446	1212
rps15	gene	ribosomal-protein	−	121518	121791	273
ycf1	gene	other	−	122057	127703	5646
trnN-GUU	gene	translation-rna	+	127921	127993	72
trnR-ACG	gene	translation-rna	−	128539	128613	74
rrn5	gene	ribosomal-rna	−	128847	128968	121
rrn4.5	gene	ribosomal-rna	−	129215	129318	103
rrn23	gene	ribosomal-rna	−	129416	132229	2813
trnA-UGC	gene	translation-rna	−	132398	133279	881
trnI-GAU	gene	translation-rna	−	133343	134364	1021
ycf68	gene	other	−	133969	134209	240
rrn16	gene	ribosomal-rna	−	134662	136153	1491
trnV-GAC	gene	translation-rna	−	136380	136452	72
rps7	gene	ribosomal-protein	+	138873	139341	468
ndhB	gene	nad-dehydrogenase	+	139615	141827	2212
trnL-CAA	gene	translation-rna	+	142369	142450	81
ycf15	gene	other	−	142705	142903	198
ycf2	gene	other	−	143044	149842	6798
trnI-CAU	gene	translation-rna	+	149930	150004	74
rpl23	gene	ribosomal-protein	+	150163	150445	282
rpl2	gene	ribosomal-protein	+	150463	151946	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ075913.1DNA · accDPQ075913DNA · atpBPQ075913DNA · matKPQ075913DNA · ndhFPQ075913DNA · psbAPQ075913DNA · rbcLPQ075913DNA · rps12PQ075913DNA · ycf1PQ075913