Coordinate-aware organelle record

Scutellaria violacea chloroplast genome

Available PQ058250.1 153,660 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	378	1437	1059
trnK-UUU	gene	translation-rna	−	1669	4266	2597
matK	gene	other	−	1964	3509	1545
rps16	gene	ribosomal-protein	−	5175	6354	1179
trnQ-UUG	gene	translation-rna	−	7450	7522	72
psbK	gene	photosystem-ii	+	7846	8032	186
psbI	gene	photosystem-ii	+	8422	8533	111
trnS-GCU	gene	translation-rna	−	8651	8739	88
trnG-UCC	gene	translation-rna	+	9429	10191	762
trnR-UCU	gene	translation-rna	+	10365	10437	72
atpA	gene	atp-synthase	−	10533	12057	1524
atpF	gene	atp-synthase	−	12139	13367	1228
atpH	gene	atp-synthase	−	13742	13988	246
atpI	gene	atp-synthase	−	14976	15720	744
rps2	gene	ribosomal-protein	−	16067	16904	837
rpoC2	gene	rna-polymerase	−	16994	21200	4206
rpoC1	gene	rna-polymerase	−	21354	24161	2807
rpoB	gene	rna-polymerase	−	24187	27400	3213
trnC-GCA	gene	translation-rna	+	28556	28627	71
petN	gene	cytochrome	+	29338	29428	90
psbM	gene	photosystem-ii	−	30499	30613	114
trnD-GUC	gene	translation-rna	−	31132	31206	74
trnY-GUA	gene	translation-rna	−	31319	31403	84
trnE-UUC	gene	translation-rna	−	31462	31535	73
trnT-GGU	gene	translation-rna	+	32103	32175	72
psbD	gene	photosystem-ii	+	34664	35726	1062
psbC	gene	photosystem-ii	+	35673	37095	1422
trnS-UGA	gene	translation-rna	−	37331	37423	92
psbZ	gene	photosystem-ii	+	37742	37931	189
trnG-GCC	gene	translation-rna	+	38202	38273	71
trnfM-CAU	gene	translation-rna	−	38426	38500	74
rps14	gene	ribosomal-protein	−	38649	38952	303
psaB	gene	photosystem-i	−	39079	41284	2205
psaA	gene	photosystem-i	−	41309	43562	2253
ycf3	gene	other	−	44266	46189	1923
trnS-GGA	gene	translation-rna	+	47060	47147	87
rps4	gene	ribosomal-protein	−	47424	48030	606
trnT-UGU	gene	translation-rna	−	48371	48444	73
trnL-UAA	gene	translation-rna	+	49126	49694	568
trnF-GAA	gene	translation-rna	+	49992	50065	73
ndhJ	gene	nad-dehydrogenase	−	50719	51196	477
ndhK	gene	nad-dehydrogenase	−	51303	51981	678
ndhC	gene	nad-dehydrogenase	−	52033	52396	363
trnV-UAC	gene	translation-rna	−	53367	54020	653
trnM-CAU	gene	translation-rna	+	54200	54273	73
atpE	gene	atp-synthase	−	54482	54884	402
atpB	gene	atp-synthase	−	54880	56377	1497
rbcL	gene	other	+	57129	58593	1464
accD	gene	other	+	59306	60785	1479
psaI	gene	photosystem-i	+	61497	61608	111
ycf4	gene	other	+	62041	62596	555
cemA	gene	other	+	63337	63937	600
petA	gene	cytochrome	+	64144	65107	963
psbJ	gene	photosystem-ii	−	66135	66258	123
psbL	gene	photosystem-ii	−	66391	66613	222
psbF	gene	photosystem-ii	−	66531	66651	120
psbE	gene	photosystem-ii	−	66665	66917	252
petL	gene	cytochrome	+	67825	67921	96
petG	gene	cytochrome	+	68096	68210	114
trnW-CCA	gene	translation-rna	−	68328	68402	74
trnP-UGG	gene	translation-rna	−	68572	68646	74
psaJ	gene	photosystem-i	+	68918	69053	135
rpl33	gene	ribosomal-protein	+	69524	69725	201
rps18	gene	ribosomal-protein	+	69894	70200	306
rpl20	gene	ribosomal-protein	−	70434	70821	387
rps12	gene	ribosomal-protein	−	71606	99696	28090
rps12	gene	ribosomal-protein	+	71606	140468	68862
clpP	gene	other	−	71873	73794	1921
psbB	gene	photosystem-ii	+	74256	75783	1527
psbT	gene	photosystem-ii	+	75974	76082	108
psbN	gene	photosystem-ii	−	76142	76274	132
psbH	gene	photosystem-ii	+	76377	76599	222
petB	gene	cytochrome	+	76723	78098	1375
petD	gene	cytochrome	+	78286	79498	1212
rpoA	gene	rna-polymerase	−	79872	80739	867
rps11	gene	ribosomal-protein	−	80741	81158	417
rpl36	gene	ribosomal-protein	−	81259	81373	114
infA	gene	other	−	81468	81702	234
rps8	gene	ribosomal-protein	−	81821	82232	411
rpl14	gene	ribosomal-protein	−	82402	82771	369
rpl16	gene	ribosomal-protein	−	82897	84142	1245
rps3	gene	ribosomal-protein	−	84296	84959	663
rpl22	gene	ribosomal-protein	−	84960	85416	456
rps19	gene	ribosomal-protein	−	85475	85754	279
rpl2	gene	ribosomal-protein	−	85808	87291	1483
rpl23	gene	ribosomal-protein	−	87309	87591	282
trnI-CAU	gene	translation-rna	−	87750	87824	74
ycf2	gene	other	+	87912	94689	6777
ycf15	gene	other	+	94822	94972	150
trnL-CAA	gene	translation-rna	−	95275	95356	81
ndhB	gene	nad-dehydrogenase	−	95898	98110	2212
rps7	gene	ribosomal-protein	−	98384	98852	468
trnV-GAC	gene	translation-rna	+	101273	101345	72
rrn16	gene	ribosomal-rna	+	101572	103063	1491
trnI-GAU	gene	translation-rna	+	103361	104382	1021
trnA-UGC	gene	translation-rna	+	104446	105335	889
rrn23	gene	ribosomal-rna	+	105504	108317	2813
rrn4.5	gene	ribosomal-rna	+	108415	108518	103
rrn5	gene	ribosomal-rna	+	108765	108886	121
trnR-ACG	gene	translation-rna	+	109120	109194	74
trnN-GUU	gene	translation-rna	−	109740	109812	72
ndhF	gene	nad-dehydrogenase	−	110887	113128	2241
rpl32	gene	ribosomal-protein	+	113641	113818	177
trnL-UAG	gene	translation-rna	+	114252	114332	80
ccsA	gene	other	+	114432	115407	975
ndhD	gene	nad-dehydrogenase	−	115640	117143	1503
psaC	gene	photosystem-i	−	117269	117515	246
ndhE	gene	nad-dehydrogenase	−	117762	118068	306
ndhG	gene	nad-dehydrogenase	−	118298	118829	531
ndhI	gene	nad-dehydrogenase	−	119180	119681	501
ndhA	gene	nad-dehydrogenase	−	119761	121863	2102
ndhH	gene	nad-dehydrogenase	−	121864	123046	1182
rps15	gene	ribosomal-protein	−	123142	123415	273
ycf1	gene	other	−	123683	129233	5550
trnN-GUU	gene	translation-rna	+	129561	129633	72
trnR-ACG	gene	translation-rna	−	130179	130253	74
rrn5	gene	ribosomal-rna	−	130487	130608	121
rrn4.5	gene	ribosomal-rna	−	130855	130958	103
rrn23	gene	ribosomal-rna	−	131056	133869	2813
trnA-UGC	gene	translation-rna	−	134038	134927	889
trnI-GAU	gene	translation-rna	−	134991	136012	1021
ycf68	gene	other	−	135617	135857	240
rrn16	gene	ribosomal-rna	−	136310	137801	1491
trnV-GAC	gene	translation-rna	−	138028	138100	72
rps7	gene	ribosomal-protein	+	140521	140989	468
ndhB	gene	nad-dehydrogenase	+	141263	143475	2212
trnL-CAA	gene	translation-rna	+	144017	144098	81
ycf15	gene	other	−	144401	144551	150
ycf2	gene	other	−	144684	151461	6777
trnI-CAU	gene	translation-rna	+	151549	151623	74
rpl23	gene	ribosomal-protein	+	151782	152064	282
rpl2	gene	ribosomal-protein	+	152082	153565	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ058250.1DNA · accDPQ058250DNA · atpBPQ058250DNA · matKPQ058250DNA · ndhFPQ058250DNA · psbAPQ058250DNA · rbcLPQ058250DNA · rps12PQ058250DNA · ycf1PQ058250