Coordinate-aware organelle record

Scutellaria violascens chloroplast genome

Available PQ058253.1 152,473 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	372	1431	1059
trnK-UUU	gene	translation-rna	−	1671	4270	2599
matK	gene	other	−	1966	3511	1545
rps16	gene	ribosomal-protein	−	5192	6357	1165
trnQ-UUG	gene	translation-rna	−	7414	7486	72
psbK	gene	photosystem-ii	+	7810	7996	186
psbI	gene	photosystem-ii	+	8395	8506	111
trnS-GCU	gene	translation-rna	−	8623	8711	88
trnG-UCC	gene	translation-rna	+	9428	10181	753
trnR-UCU	gene	translation-rna	+	10355	10427	72
atpA	gene	atp-synthase	−	10523	12047	1524
atpF	gene	atp-synthase	−	12129	13360	1231
atpH	gene	atp-synthase	−	13721	13967	246
atpI	gene	atp-synthase	−	14953	15697	744
rps2	gene	ribosomal-protein	−	16044	16755	711
rpoC2	gene	rna-polymerase	−	16979	21179	4200
rpoC1	gene	rna-polymerase	−	21333	24183	2850
rpoB	gene	rna-polymerase	−	24209	27422	3213
trnC-GCA	gene	translation-rna	+	28604	28675	71
petN	gene	cytochrome	+	29408	29498	90
psbM	gene	photosystem-ii	−	30519	30624	105
trnD-GUC	gene	translation-rna	−	31150	31224	74
trnY-GUA	gene	translation-rna	−	31337	31421	84
trnE-UUC	gene	translation-rna	−	31480	31553	73
trnT-GGU	gene	translation-rna	+	32191	32263	72
psbD	gene	photosystem-ii	+	33580	34642	1062
psbC	gene	photosystem-ii	+	34589	36011	1422
trnS-UGA	gene	translation-rna	−	36259	36351	92
psbZ	gene	photosystem-ii	+	36666	36855	189
trnG-GCC	gene	translation-rna	+	37127	37198	71
trnfM-CAU	gene	translation-rna	−	37338	37412	74
rps14	gene	ribosomal-protein	−	37566	37869	303
psaB	gene	photosystem-i	−	37996	40201	2205
psaA	gene	photosystem-i	−	40227	42480	2253
ycf3	gene	other	−	43189	45110	1921
trnS-GGA	gene	translation-rna	+	45923	46010	87
rps4	gene	ribosomal-protein	−	46295	46901	606
trnT-UGU	gene	translation-rna	−	47249	47322	73
trnL-UAA	gene	translation-rna	+	48000	48568	568
trnF-GAA	gene	translation-rna	+	48875	48948	73
ndhJ	gene	nad-dehydrogenase	−	49600	50077	477
ndhK	gene	nad-dehydrogenase	−	50185	50863	678
ndhC	gene	nad-dehydrogenase	−	50915	51278	363
trnV-UAC	gene	translation-rna	−	52264	52917	653
trnM-CAU	gene	translation-rna	+	53105	53178	73
atpE	gene	atp-synthase	−	53387	53789	402
atpB	gene	atp-synthase	−	53785	55282	1497
rbcL	gene	other	+	56030	57491	1461
accD	gene	other	+	58204	59683	1479
psaI	gene	photosystem-i	+	60394	60505	111
ycf4	gene	other	+	60937	61492	555
cemA	gene	other	+	62220	62820	600
petA	gene	cytochrome	+	63024	63987	963
psbJ	gene	photosystem-ii	−	64984	65107	123
psbL	gene	photosystem-ii	−	65240	65357	117
psbF	gene	photosystem-ii	−	65380	65500	120
psbE	gene	photosystem-ii	−	65514	65766	252
petL	gene	cytochrome	+	66640	66736	96
petG	gene	cytochrome	+	66912	67026	114
trnW-CCA	gene	translation-rna	−	67144	67218	74
trnP-UGG	gene	translation-rna	−	67387	67461	74
psaJ	gene	photosystem-i	+	67733	67868	135
rpl33	gene	ribosomal-protein	+	68348	68549	201
rps18	gene	ribosomal-protein	+	68723	69029	306
rpl20	gene	ribosomal-protein	−	69263	69650	387
rps12	gene	ribosomal-protein	−	70444	98461	28017
rps12	gene	ribosomal-protein	+	70444	139237	68793
clpP	gene	other	−	70699	72641	1942
psbB	gene	photosystem-ii	+	73098	74625	1527
psbT	gene	photosystem-ii	+	74809	74917	108
psbN	gene	photosystem-ii	−	74977	75109	132
psbH	gene	photosystem-ii	+	75212	75434	222
petB	gene	cytochrome	+	75558	76912	1354
petD	gene	cytochrome	+	77100	78299	1199
rpoA	gene	rna-polymerase	−	78461	79469	1008
rps11	gene	ribosomal-protein	−	79540	79957	417
rpl36	gene	ribosomal-protein	−	80058	80172	114
infA	gene	other	−	80267	80501	234
rps8	gene	ribosomal-protein	−	80620	81031	411
rpl14	gene	ribosomal-protein	−	81195	81564	369
rpl16	gene	ribosomal-protein	−	81691	82912	1221
rps3	gene	ribosomal-protein	−	83017	83680	663
rpl22	gene	ribosomal-protein	−	83681	84137	456
rps19	gene	ribosomal-protein	−	84196	84475	279
rpl2	gene	ribosomal-protein	−	84529	86012	1483
rpl23	gene	ribosomal-protein	−	86030	86312	282
trnI-CAU	gene	translation-rna	−	86471	86545	74
ycf2	gene	other	+	86633	93443	6810
ycf15	gene	other	+	93533	93782	249
trnL-CAA	gene	translation-rna	−	94041	94122	81
ndhB	gene	nad-dehydrogenase	−	94663	96875	2212
rps7	gene	ribosomal-protein	−	97149	97617	468
trnV-GAC	gene	translation-rna	+	100023	100095	72
rrn16	gene	ribosomal-rna	+	100321	101812	1491
trnI-GAU	gene	translation-rna	+	102110	103130	1020
trnA-UGC	gene	translation-rna	+	103194	104083	889
rrn23	gene	ribosomal-rna	+	104252	107064	2812
rrn4.5	gene	ribosomal-rna	+	107162	107265	103
rrn5	gene	ribosomal-rna	+	107512	107633	121
trnR-ACG	gene	translation-rna	+	107867	107941	74
trnN-GUU	gene	translation-rna	−	108497	108569	72
ndhF	gene	nad-dehydrogenase	−	109645	111892	2247
rpl32	gene	ribosomal-protein	+	112409	112586	177
trnL-UAG	gene	translation-rna	+	113037	113117	80
ccsA	gene	other	+	113206	114181	975
ndhD	gene	nad-dehydrogenase	−	114419	115922	1503
psaC	gene	photosystem-i	−	116048	116294	246
ndhE	gene	nad-dehydrogenase	−	116549	116855	306
ndhG	gene	nad-dehydrogenase	−	117087	117618	531
ndhI	gene	nad-dehydrogenase	−	117975	118476	501
ndhA	gene	nad-dehydrogenase	−	118556	120647	2091
ndhH	gene	nad-dehydrogenase	−	120648	121830	1182
rps15	gene	ribosomal-protein	−	121926	122199	273
ycf1	gene	other	−	122468	128120	5652
trnN-GUU	gene	translation-rna	+	128338	128410	72
trnR-ACG	gene	translation-rna	−	128966	129040	74
rrn5	gene	ribosomal-rna	−	129274	129395	121
rrn4.5	gene	ribosomal-rna	−	129642	129745	103
rrn23	gene	ribosomal-rna	−	129843	132655	2812
trnA-UGC	gene	translation-rna	−	132824	133713	889
trnI-GAU	gene	translation-rna	−	133777	134797	1020
ycf68	gene	other	−	134348	134642	294
rrn16	gene	ribosomal-rna	−	135095	136586	1491
trnV-GAC	gene	translation-rna	−	136812	136884	72
rps7	gene	ribosomal-protein	+	139290	139758	468
ndhB	gene	nad-dehydrogenase	+	140032	142244	2212
trnL-CAA	gene	translation-rna	+	142785	142866	81
ycf15	gene	other	−	143125	143374	249
ycf2	gene	other	−	143464	150274	6810
trnI-CAU	gene	translation-rna	+	150362	150436	74
rpl23	gene	ribosomal-protein	+	150595	150877	282
rpl2	gene	ribosomal-protein	+	150895	152378	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ058253.1DNA · accDPQ058253DNA · atpBPQ058253DNA · matKPQ058253DNA · ndhFPQ058253DNA · psbAPQ058253DNA · rbcLPQ058253DNA · rps12PQ058253DNA · ycf1PQ058253