Coordinate-aware organelle record

Scutellaria woodii chloroplast genome

Available PQ058281.1 151,856 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	0	74	74
psbA	gene	photosystem-ii	−	267	1326	1059
trnK-UUU	gene	translation-rna	−	1558	4148	2590
matK	gene	other	−	1853	3392	1539
rps16	gene	ribosomal-protein	−	5041	6217	1176
trnQ-UUG	gene	translation-rna	−	7301	7373	72
psbK	gene	photosystem-ii	+	7698	7884	186
psbI	gene	photosystem-ii	+	8275	8386	111
trnS-GCU	gene	translation-rna	−	8506	8594	88
trnG-UCC	gene	translation-rna	+	9305	10053	748
trnR-UCU	gene	translation-rna	+	10227	10299	72
atpA	gene	atp-synthase	−	10395	11919	1524
atpF	gene	atp-synthase	−	12010	13240	1230
atpH	gene	atp-synthase	−	13606	13852	246
atpI	gene	atp-synthase	−	14837	15581	744
rps2	gene	ribosomal-protein	−	15930	16767	837
rpoC2	gene	rna-polymerase	−	16857	21063	4206
rpoC1	gene	rna-polymerase	−	21217	24045	2828
rpoB	gene	rna-polymerase	−	24071	27284	3213
trnC-GCA	gene	translation-rna	+	28437	28508	71
petN	gene	cytochrome	+	29206	29296	90
psbM	gene	photosystem-ii	−	30312	30417	105
trnD-GUC	gene	translation-rna	−	30942	31016	74
trnY-GUA	gene	translation-rna	−	31129	31213	84
trnE-UUC	gene	translation-rna	−	31272	31345	73
trnT-GGU	gene	translation-rna	+	31920	31992	72
psbD	gene	photosystem-ii	+	33304	34366	1062
psbC	gene	photosystem-ii	+	34313	35735	1422
trnS-UGA	gene	translation-rna	−	35979	36071	92
psbZ	gene	photosystem-ii	+	36390	36579	189
trnG-GCC	gene	translation-rna	+	36837	36908	71
trnfM-CAU	gene	translation-rna	−	37053	37127	74
rps14	gene	ribosomal-protein	−	37276	37579	303
psaB	gene	photosystem-i	−	37706	39911	2205
psaA	gene	photosystem-i	−	39936	42189	2253
ycf3	gene	other	−	42889	44827	1938
trnS-GGA	gene	translation-rna	+	45718	45805	87
rps4	gene	ribosomal-protein	−	46088	46694	606
trnT-UGU	gene	translation-rna	−	47027	47100	73
trnL-UAA	gene	translation-rna	+	47781	48350	569
trnF-GAA	gene	translation-rna	+	48650	48723	73
ndhJ	gene	nad-dehydrogenase	−	49376	49853	477
ndhK	gene	nad-dehydrogenase	−	49960	50638	678
ndhC	gene	nad-dehydrogenase	−	50690	51053	363
trnV-UAC	gene	translation-rna	−	51506	52160	654
trnM-CAU	gene	translation-rna	+	52340	52413	73
atpE	gene	atp-synthase	−	52621	53023	402
atpB	gene	atp-synthase	−	53019	54516	1497
rbcL	gene	other	+	55261	56725	1464
accD	gene	other	+	57451	58930	1479
psaI	gene	photosystem-i	+	59640	59751	111
ycf4	gene	other	+	60205	60760	555
cemA	gene	other	+	61502	62102	600
petA	gene	cytochrome	+	62308	63271	963
psbJ	gene	photosystem-ii	−	64300	64423	123
psbL	gene	photosystem-ii	−	64556	64673	117
psbF	gene	photosystem-ii	−	64696	64816	120
psbE	gene	photosystem-ii	−	64830	65082	252
petL	gene	cytochrome	+	65987	66083	96
petG	gene	cytochrome	+	66258	66372	114
trnW-CCA	gene	translation-rna	−	66490	66564	74
trnP-UGG	gene	translation-rna	−	66723	66797	74
psaJ	gene	photosystem-i	+	67069	67204	135
rpl33	gene	ribosomal-protein	+	67686	67887	201
rps18	gene	ribosomal-protein	+	68061	68367	306
rpl20	gene	ribosomal-protein	−	68594	68981	387
rps12	gene	ribosomal-protein	−	69777	97907	28130
rps12	gene	ribosomal-protein	+	69777	138616	68839
clpP	gene	other	−	70033	71979	1946
psbB	gene	photosystem-ii	+	72447	73974	1527
psbT	gene	photosystem-ii	+	74166	74274	108
psbN	gene	photosystem-ii	−	74334	74466	132
psbH	gene	photosystem-ii	+	74569	74791	222
petB	gene	cytochrome	+	74916	76274	1358
petD	gene	cytochrome	+	76462	77664	1202
rpoA	gene	rna-polymerase	−	77826	78840	1014
rps11	gene	ribosomal-protein	−	78911	79328	417
rpl36	gene	ribosomal-protein	−	79430	79544	114
infA	gene	other	−	79639	79873	234
rps8	gene	ribosomal-protein	−	79992	80403	411
rpl14	gene	ribosomal-protein	−	80568	80937	369
rpl16	gene	ribosomal-protein	−	81064	82312	1248
rps3	gene	ribosomal-protein	−	82459	83122	663
rpl22	gene	ribosomal-protein	−	83148	83580	432
rps19	gene	ribosomal-protein	−	83639	83918	279
rpl2	gene	ribosomal-protein	−	83973	85456	1483
rpl23	gene	ribosomal-protein	−	85474	85756	282
trnI-CAU	gene	translation-rna	−	85915	85989	74
ycf2	gene	other	+	86077	92887	6810
ycf15	gene	other	+	92977	93226	249
trnL-CAA	gene	translation-rna	−	93486	93567	81
ndhB	gene	nad-dehydrogenase	−	94109	96321	2212
rps7	gene	ribosomal-protein	−	96595	97063	468
trnV-GAC	gene	translation-rna	+	99461	99533	72
rrn16	gene	ribosomal-rna	+	99760	101251	1491
trnI-GAU	gene	translation-rna	+	101541	102561	1020
trnA-UGC	gene	translation-rna	+	102625	103510	885
rrn23	gene	ribosomal-rna	+	103679	106492	2813
rrn4.5	gene	ribosomal-rna	+	106590	106693	103
rrn5	gene	ribosomal-rna	+	106940	107061	121
trnR-ACG	gene	translation-rna	+	107295	107369	74
trnN-GUU	gene	translation-rna	−	107925	107997	72
ndhF	gene	nad-dehydrogenase	−	109079	111320	2241
rpl32	gene	ribosomal-protein	+	111835	112012	177
trnL-UAG	gene	translation-rna	+	112451	112531	80
ccsA	gene	other	+	112638	113613	975
ndhD	gene	nad-dehydrogenase	−	113847	115377	1530
psaC	gene	photosystem-i	−	115475	115721	246
ndhE	gene	nad-dehydrogenase	−	115976	116282	306
ndhG	gene	nad-dehydrogenase	−	116499	117030	531
ndhI	gene	nad-dehydrogenase	−	117386	117887	501
ndhA	gene	nad-dehydrogenase	−	117967	120055	2088
ndhH	gene	nad-dehydrogenase	−	120056	121238	1182
rps15	gene	ribosomal-protein	−	121328	121601	273
ycf1	gene	other	−	121874	127517	5643
trnN-GUU	gene	translation-rna	+	127735	127807	72
trnR-ACG	gene	translation-rna	−	128363	128437	74
rrn5	gene	ribosomal-rna	−	128671	128792	121
rrn4.5	gene	ribosomal-rna	−	129039	129142	103
rrn23	gene	ribosomal-rna	−	129240	132053	2813
trnA-UGC	gene	translation-rna	−	132222	133107	885
trnI-GAU	gene	translation-rna	−	133171	134191	1020
ycf68	gene	other	−	133742	134036	294
rrn16	gene	ribosomal-rna	−	134481	135972	1491
trnV-GAC	gene	translation-rna	−	136199	136271	72
rps7	gene	ribosomal-protein	+	138669	139137	468
ndhB	gene	nad-dehydrogenase	+	139411	141623	2212
trnL-CAA	gene	translation-rna	+	142165	142246	81
ycf15	gene	other	−	142506	142755	249
ycf2	gene	other	−	142845	149655	6810
trnI-CAU	gene	translation-rna	+	149743	149817	74
rpl23	gene	ribosomal-protein	+	149976	150258	282
rpl2	gene	ribosomal-protein	+	150276	151759	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ058281.1DNA · accDPQ058281DNA · atpBPQ058281DNA · matKPQ058281DNA · ndhFPQ058281DNA · psbAPQ058281DNA · rbcLPQ058281DNA · rps12PQ058281DNA · ycf1PQ058281