Scutellaria wrightii chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PQ058264.1 · 3–76 bp · −
psbA · PQ058264.1 · 380–1,438 bp · −
trnK-UUU · PQ058264.1 · 1,671–4,253 bp · −
matK · PQ058264.1 · 1,966–3,501 bp · −
rps16 · PQ058264.1 · 5,142–6,289 bp · −
trnQ-UUG · PQ058264.1 · 7,404–7,475 bp · −
trnS-GCU · PQ058264.1 · 8,606–8,693 bp · −
atpA · PQ058264.1 · 10,484–12,007 bp · −
atpF · PQ058264.1 · 12,090–13,318 bp · −
atpH · PQ058264.1 · 13,676–13,921 bp · −
atpI · PQ058264.1 · 14,921–15,664 bp · −
rps2 · PQ058264.1 · 16,014–16,724 bp · −
rpoC2 · PQ058264.1 · 16,941–21,134 bp · −
rpoC1 · PQ058264.1 · 21,289–24,127 bp · −
rpoB · PQ058264.1 · 24,154–27,366 bp · −
psbM · PQ058264.1 · 30,423–30,527 bp · −
trnD-GUC · PQ058264.1 · 31,053–31,126 bp · −
trnY-GUA · PQ058264.1 · 31,240–31,323 bp · −
trnE-UUC · PQ058264.1 · 31,383–31,455 bp · −
trnS-UGA · PQ058264.1 · 36,101–36,192 bp · −
trnfM-CAU · PQ058264.1 · 37,189–37,262 bp · −
rps14 · PQ058264.1 · 37,412–37,714 bp · −
psaB · PQ058264.1 · 37,842–40,046 bp · −
psaA · PQ058264.1 · 40,072–42,324 bp · −
ycf3 · PQ058264.1 · 43,034–44,959 bp · −
rps4 · PQ058264.1 · 46,213–46,818 bp · −
trnT-UGU · PQ058264.1 · 47,158–47,230 bp · −
ndhJ · PQ058264.1 · 49,474–49,950 bp · −
ndhK · PQ058264.1 · 50,058–50,819 bp · −
ndhC · PQ058264.1 · 50,789–51,151 bp · −
trnV-UAC · PQ058264.1 · 52,139–52,791 bp · −
atpE · PQ058264.1 · 53,254–53,655 bp · −
atpB · PQ058264.1 · 53,652–55,148 bp · −
psbJ · PQ058264.1 · 64,848–64,970 bp · −
psbL · PQ058264.1 · 65,104–65,325 bp · −
psbF · PQ058264.1 · 65,244–65,363 bp · −
psbE · PQ058264.1 · 65,378–65,629 bp · −
trnW-CCA · PQ058264.1 · 67,040–67,113 bp · −
trnP-UGG · PQ058264.1 · 67,277–67,350 bp · −
rpl20 · PQ058264.1 · 69,142–69,528 bp · −
rps12 · PQ058264.1 · 70,307–70,432 bp · −
rps12 · PQ058264.1 · 97,585–98,375 bp · −
clpP · PQ058264.1 · 70,573–72,515 bp · −
psbN · PQ058264.1 · 74,873–75,004 bp · −
rpoA · PQ058264.1 · 78,373–79,386 bp · −
rps11 · PQ058264.1 · 79,458–79,874 bp · −
rpl36 · PQ058264.1 · 79,976–80,089 bp · −
infA · PQ058264.1 · 80,184–80,417 bp · −
rps8 · PQ058264.1 · 80,537–80,947 bp · −
rpl14 · PQ058264.1 · 81,106–81,474 bp · −
rpl16 · PQ058264.1 · 81,604–82,787 bp · −
rps3 · PQ058264.1 · 82,942–83,604 bp · −
rpl22 · PQ058264.1 · 83,606–84,061 bp · −
rps19 · PQ058264.1 · 84,125–84,403 bp · −
rpl2 · PQ058264.1 · 84,458–85,940 bp · −
rpl23 · PQ058264.1 · 85,959–86,240 bp · −
trnI-CAU · PQ058264.1 · 86,400–86,473 bp · −
trnL-CAA · PQ058264.1 · 93,955–94,035 bp · −
ndhB · PQ058264.1 · 94,578–96,735 bp · −
rps7 · PQ058264.1 · 97,064–97,531 bp · −
trnN-GUU · PQ058264.1 · 108,387–108,458 bp · −
ndhF · PQ058264.1 · 109,535–111,775 bp · −
ndhD · PQ058264.1 · 114,305–115,828 bp · −
psaC · PQ058264.1 · 115,934–116,179 bp · −
ndhE · PQ058264.1 · 116,442–116,747 bp · −
ndhG · PQ058264.1 · 116,968–117,498 bp · −
ndhI · PQ058264.1 · 117,864–118,364 bp · −
ndhA · PQ058264.1 · 118,445–120,540 bp · −
ndhH · PQ058264.1 · 120,542–121,723 bp · −
rps15 · PQ058264.1 · 121,820–122,092 bp · −
ycf1 · PQ058264.1 · 122,393–127,966 bp · −
trnR-ACG · PQ058264.1 · 128,803–128,876 bp · −
rrn5 · PQ058264.1 · 129,101–129,221 bp · −
rrn4.5 · PQ058264.1 · 129,469–129,571 bp · −
rrn23 · PQ058264.1 · 129,670–132,482 bp · −
trnA-UGC · PQ058264.1 · 132,645–133,532 bp · −
trnI-GAU · PQ058264.1 · 133,597–134,617 bp · −
ycf68 · PQ058264.1 · 134,223–134,462 bp · −
rrn16 · PQ058264.1 · 134,916–136,406 bp · −
trnV-GAC · PQ058264.1 · 136,634–136,705 bp · −
ycf15 · PQ058264.1 · 142,942–143,190 bp · −
ycf2 · PQ058264.1 · 143,281–150,081 bp · −
psbK · PQ058264.1 · 7,800–7,985 bp · +
psbI · PQ058264.1 · 8,385–8,495 bp · +
trnG-UCC · PQ058264.1 · 9,384–10,141 bp · +
trnR-UCU · PQ058264.1 · 10,316–10,387 bp · +
trnC-GCA · PQ058264.1 · 28,524–28,594 bp · +
petN · PQ058264.1 · 29,306–29,395 bp · +
trnT-GGU · PQ058264.1 · 32,045–32,116 bp · +
psbD · PQ058264.1 · 33,420–34,481 bp · +
psbC · PQ058264.1 · 34,429–35,850 bp · +
psbZ · PQ058264.1 · 36,508–36,696 bp · +
trnG-GCC · PQ058264.1 · 36,968–37,038 bp · +
trnS-GGA · PQ058264.1 · 45,843–45,929 bp · +
trnL-UAA · PQ058264.1 · 47,867–48,427 bp · +
trnF-GAA · PQ058264.1 · 48,737–48,809 bp · +
trnM-CAU · PQ058264.1 · 52,972–53,044 bp · +
rbcL · PQ058264.1 · 55,904–57,367 bp · +
accD · PQ058264.1 · 58,099–59,547 bp · +
psaI · PQ058264.1 · 60,254–60,364 bp · +
ycf4 · PQ058264.1 · 60,791–61,345 bp · +
cemA · PQ058264.1 · 62,086–62,685 bp · +
petA · PQ058264.1 · 62,891–63,853 bp · +
petL · PQ058264.1 · 66,537–66,632 bp · +
petG · PQ058264.1 · 66,808–66,921 bp · +
psaJ · PQ058264.1 · 67,623–67,757 bp · +
rpl33 · PQ058264.1 · 68,229–68,429 bp · +
rps18 · PQ058264.1 · 68,603–68,908 bp · +
rps12 · PQ058264.1 · 138,268–139,058 bp · +
psbB · PQ058264.1 · 72,985–74,511 bp · +
psbT · PQ058264.1 · 74,703–74,804 bp · +
psbH · PQ058264.1 · 75,108–75,329 bp · +
petB · PQ058264.1 · 75,454–76,821 bp · +
petD · PQ058264.1 · 77,010–78,210 bp · +
ycf2 · PQ058264.1 · 86,562–93,362 bp · +
ycf15 · PQ058264.1 · 93,453–93,701 bp · +
trnV-GAC · PQ058264.1 · 99,938–100,009 bp · +
rrn16 · PQ058264.1 · 100,237–101,727 bp · +
trnI-GAU · PQ058264.1 · 102,026–103,046 bp · +
trnA-UGC · PQ058264.1 · 103,111–103,998 bp · +
rrn23 · PQ058264.1 · 104,161–106,973 bp · +
rrn4.5 · PQ058264.1 · 107,072–107,174 bp · +
rrn5 · PQ058264.1 · 107,422–107,542 bp · +
trnR-ACG · PQ058264.1 · 107,767–107,840 bp · +
rpl32 · PQ058264.1 · 112,298–112,474 bp · +
trnL-UAG · PQ058264.1 · 112,915–112,994 bp · +
ccsA · PQ058264.1 · 113,092–114,066 bp · +
trnN-GUU · PQ058264.1 · 128,185–128,256 bp · +
rps7 · PQ058264.1 · 139,112–139,579 bp · +
ndhB · PQ058264.1 · 139,908–142,065 bp · +
trnL-CAA · PQ058264.1 · 142,608–142,688 bp · +
trnI-CAU · PQ058264.1 · 150,170–150,243 bp · +
rpl23 · PQ058264.1 · 150,403–150,684 bp · +
rpl2 · PQ058264.1 · 150,703–152,185 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Scutellaria wrightii
ANNOTATED PLASTOME
PQ058264.1
152,280 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38070 76140 114210 152280 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU ycf68 rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 3 76 74 Locate
psbA gene − 380 1438 1059 Locate
trnK-UUU gene − 1671 4253 2583 Locate
matK gene − 1966 3501 1536 Locate
rps16 gene − 5142 6289 1148 Locate
trnQ-UUG gene − 7404 7475 72 Locate
psbK gene + 7800 7985 186 Locate
psbI gene + 8385 8495 111 Locate
trnS-GCU gene − 8606 8693 88 Locate
trnG-UCC gene + 9384 10141 758 Locate
trnR-UCU gene + 10316 10387 72 Locate
atpA gene − 10484 12007 1524 Locate
atpF gene − 12090 13318 1229 Locate
atpH gene − 13676 13921 246 Locate
atpI gene − 14921 15664 744 Locate
rps2 gene − 16014 16724 711 Locate
rpoC2 gene − 16941 21134 4194 Locate
rpoC1 gene − 21289 24127 2839 Locate
rpoB gene − 24154 27366 3213 Locate
trnC-GCA gene + 28524 28594 71 Locate
petN gene + 29306 29395 90 Locate
psbM gene − 30423 30527 105 Locate
trnD-GUC gene − 31053 31126 74 Locate
trnY-GUA gene − 31240 31323 84 Locate
trnE-UUC gene − 31383 31455 73 Locate
trnT-GGU gene + 32045 32116 72 Locate
psbD gene + 33420 34481 1062 Locate
psbC gene + 34429 35850 1422 Locate
trnS-UGA gene − 36101 36192 92 Locate
psbZ gene + 36508 36696 189 Locate
trnG-GCC gene + 36968 37038 71 Locate
trnfM-CAU gene − 37189 37262 74 Locate
rps14 gene − 37412 37714 303 Locate
psaB gene − 37842 40046 2205 Locate
psaA gene − 40072 42324 2253 Locate
ycf3 gene − 43034 44959 1926 Locate
trnS-GGA gene + 45843 45929 87 Locate
rps4 gene − 46213 46818 606 Locate
trnT-UGU gene − 47158 47230 73 Locate
trnL-UAA gene + 47867 48427 561 Locate
trnF-GAA gene + 48737 48809 73 Locate
ndhJ gene − 49474 49950 477 Locate
ndhK gene − 50058 50819 762 Locate
ndhC gene − 50789 51151 363 Locate
trnV-UAC gene − 52139 52791 653 Locate
trnM-CAU gene + 52972 53044 73 Locate
atpE gene − 53254 53655 402 Locate
atpB gene − 53652 55148 1497 Locate
rbcL gene + 55904 57367 1464 Locate
accD gene + 58099 59547 1449 Locate
psaI gene + 60254 60364 111 Locate
ycf4 gene + 60791 61345 555 Locate
cemA gene + 62086 62685 600 Locate
petA gene + 62891 63853 963 Locate
psbJ gene − 64848 64970 123 Locate
psbL gene − 65104 65325 222 Locate
psbF gene − 65244 65363 120 Locate
psbE gene − 65378 65629 252 Locate
petL gene + 66537 66632 96 Locate
petG gene + 66808 66921 114 Locate
trnW-CCA gene − 67040 67113 74 Locate
trnP-UGG gene − 67277 67350 74 Locate
psaJ gene + 67623 67757 135 Locate
rpl33 gene + 68229 68429 201 Locate
rps18 gene + 68603 68908 306 Locate
rpl20 gene − 69142 69528 387 Locate
rps12 gene − 70307 70432 126 Locate
clpP gene − 70573 72515 1943 Locate
psbB gene + 72985 74511 1527 Locate
psbT gene + 74703 74804 102 Locate
psbN gene − 74873 75004 132 Locate
psbH gene + 75108 75329 222 Locate
petB gene + 75454 76821 1368 Locate
petD gene + 77010 78210 1201 Locate
rpoA gene − 78373 79386 1014 Locate
rps11 gene − 79458 79874 417 Locate
rpl36 gene − 79976 80089 114 Locate
infA gene − 80184 80417 234 Locate
rps8 gene − 80537 80947 411 Locate
rpl14 gene − 81106 81474 369 Locate
rpl16 gene − 81604 82787 1184 Locate
rps3 gene − 82942 83604 663 Locate
rpl22 gene − 83606 84061 456 Locate
rps19 gene − 84125 84403 279 Locate
rpl2 gene − 84458 85940 1483 Locate
rpl23 gene − 85959 86240 282 Locate
trnI-CAU gene − 86400 86473 74 Locate
ycf2 gene + 86562 93362 6801 Locate
ycf15 gene + 93453 93701 249 Locate
trnL-CAA gene − 93955 94035 81 Locate
ndhB gene − 94578 96735 2158 Locate
rps7 gene − 97064 97531 468 Locate
rps12 gene − 97585 98375 791 Locate
trnV-GAC gene + 99938 100009 72 Locate
rrn16 gene + 100237 101727 1491 Locate
trnI-GAU gene + 102026 103046 1021 Locate
trnA-UGC gene + 103111 103998 888 Locate
rrn23 gene + 104161 106973 2813 Locate
rrn4.5 gene + 107072 107174 103 Locate
rrn5 gene + 107422 107542 121 Locate
trnR-ACG gene + 107767 107840 74 Locate
trnN-GUU gene − 108387 108458 72 Locate
ndhF gene − 109535 111775 2241 Locate
rpl32 gene + 112298 112474 177 Locate
trnL-UAG gene + 112915 112994 80 Locate
ccsA gene + 113092 114066 975 Locate
ndhD gene − 114305 115828 1524 Locate
psaC gene − 115934 116179 246 Locate
ndhE gene − 116442 116747 306 Locate
ndhG gene − 116968 117498 531 Locate
ndhI gene − 117864 118364 501 Locate
ndhA gene − 118445 120540 2096 Locate
ndhH gene − 120542 121723 1182 Locate
rps15 gene − 121820 122092 273 Locate
ycf1 gene − 122393 127966 5574 Locate
trnN-GUU gene + 128185 128256 72 Locate
trnR-ACG gene − 128803 128876 74 Locate
rrn5 gene − 129101 129221 121 Locate
rrn4.5 gene − 129469 129571 103 Locate
rrn23 gene − 129670 132482 2813 Locate
trnA-UGC gene − 132645 133532 888 Locate
trnI-GAU gene − 133597 134617 1021 Locate
ycf68 gene − 134223 134462 240 Locate
rrn16 gene − 134916 136406 1491 Locate
trnV-GAC gene − 136634 136705 72 Locate
rps12 gene + 138268 139058 791 Locate
rps7 gene + 139112 139579 468 Locate
ndhB gene + 139908 142065 2158 Locate
trnL-CAA gene + 142608 142688 81 Locate
ycf15 gene − 142942 143190 249 Locate
ycf2 gene − 143281 150081 6801 Locate
trnI-CAU gene + 150170 150243 74 Locate
rpl23 gene + 150403 150684 282 Locate
rpl2 gene + 150703 152185 1483 Locate
Status Available
Accession PQ058264.1
Length 152,280 bp
GC content 38.3%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources