Coordinate-aware organelle record

Scutellaria yezoensis chloroplast genome

Available PQ059346.1 152,588 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	379	1438	1059
trnK-UUU	gene	translation-rna	−	1670	4258	2588
matK	gene	other	−	1965	3501	1536
rps16	gene	ribosomal-protein	−	5162	6331	1169
trnQ-UUG	gene	translation-rna	−	7461	7533	72
psbK	gene	photosystem-ii	+	7857	8043	186
psbI	gene	photosystem-ii	+	8433	8544	111
trnS-GCU	gene	translation-rna	−	8662	8750	88
trnG-UCC	gene	translation-rna	+	9437	10197	760
trnR-UCU	gene	translation-rna	+	10386	10458	72
atpA	gene	atp-synthase	−	10554	12078	1524
atpF	gene	atp-synthase	−	12151	13379	1228
atpH	gene	atp-synthase	−	13745	13991	246
atpI	gene	atp-synthase	−	14987	15731	744
rps2	gene	ribosomal-protein	−	16079	16790	711
rpoC2	gene	rna-polymerase	−	17005	21211	4206
rpoC1	gene	rna-polymerase	−	21365	24202	2837
rpoB	gene	rna-polymerase	−	24228	27441	3213
trnC-GCA	gene	translation-rna	+	28604	28675	71
petN	gene	cytochrome	+	29385	29475	90
psbM	gene	photosystem-ii	−	30502	30607	105
trnD-GUC	gene	translation-rna	−	31132	31206	74
trnY-GUA	gene	translation-rna	−	31319	31403	84
trnE-UUC	gene	translation-rna	−	31462	31535	73
trnT-GGU	gene	translation-rna	+	32117	32189	72
psbD	gene	photosystem-ii	+	33485	34547	1062
psbC	gene	photosystem-ii	+	34494	35916	1422
trnS-UGA	gene	translation-rna	−	36159	36251	92
psbZ	gene	photosystem-ii	+	36570	36759	189
trnG-GCC	gene	translation-rna	+	37030	37101	71
trnfM-CAU	gene	translation-rna	−	37245	37319	74
rps14	gene	ribosomal-protein	−	37468	37771	303
psaB	gene	photosystem-i	−	37898	40103	2205
psaA	gene	photosystem-i	−	40128	42381	2253
ycf3	gene	other	−	43055	44978	1923
trnS-GGA	gene	translation-rna	+	45871	45958	87
rps4	gene	ribosomal-protein	−	46243	46849	606
trnT-UGU	gene	translation-rna	−	47187	47260	73
trnL-UAA	gene	translation-rna	+	47945	48514	569
trnF-GAA	gene	translation-rna	+	48820	48893	73
ndhJ	gene	nad-dehydrogenase	−	49541	50018	477
ndhK	gene	nad-dehydrogenase	−	50125	50803	678
ndhC	gene	nad-dehydrogenase	−	50855	51218	363
trnV-UAC	gene	translation-rna	−	52214	52867	653
trnM-CAU	gene	translation-rna	+	53047	53120	73
atpE	gene	atp-synthase	−	53329	53731	402
atpB	gene	atp-synthase	−	53727	55215	1488
rbcL	gene	other	+	55966	57430	1464
accD	gene	other	+	58140	59607	1467
psaI	gene	photosystem-i	+	60337	60448	111
ycf4	gene	other	+	60881	61436	555
cemA	gene	other	+	62184	62784	600
petA	gene	cytochrome	+	62990	63953	963
psbJ	gene	photosystem-ii	−	64970	65093	123
psbL	gene	photosystem-ii	−	65226	65343	117
psbF	gene	photosystem-ii	−	65366	65486	120
psbE	gene	photosystem-ii	−	65500	65752	252
petL	gene	cytochrome	+	66659	66755	96
petG	gene	cytochrome	+	66929	67043	114
trnW-CCA	gene	translation-rna	−	67161	67235	74
trnP-UGG	gene	translation-rna	−	67404	67478	74
psaJ	gene	photosystem-i	+	67749	67884	135
rpl33	gene	ribosomal-protein	+	68355	68556	201
rps18	gene	ribosomal-protein	+	68730	69036	306
rpl20	gene	ribosomal-protein	−	69273	69660	387
rps12	gene	ribosomal-protein	−	70456	98581	28125
rps12	gene	ribosomal-protein	+	70456	139355	68899
clpP	gene	other	−	70712	72647	1935
psbB	gene	photosystem-ii	+	73121	74648	1527
psbT	gene	photosystem-ii	+	74839	74941	102
psbN	gene	photosystem-ii	−	75014	75146	132
psbH	gene	photosystem-ii	+	75249	75471	222
petB	gene	cytochrome	+	75595	76961	1366
petD	gene	cytochrome	+	77149	78351	1202
rpoA	gene	rna-polymerase	−	78513	79527	1014
rps11	gene	ribosomal-protein	−	79598	80015	417
rpl36	gene	ribosomal-protein	−	80116	80230	114
infA	gene	other	−	80325	80559	234
rps8	gene	ribosomal-protein	−	80678	81089	411
rpl14	gene	ribosomal-protein	−	81247	81616	369
rpl16	gene	ribosomal-protein	−	81742	82986	1244
rps3	gene	ribosomal-protein	−	83140	83803	663
rpl22	gene	ribosomal-protein	−	83804	84260	456
rps19	gene	ribosomal-protein	−	84319	84598	279
rpl2	gene	ribosomal-protein	−	84652	86135	1483
rpl23	gene	ribosomal-protein	−	86153	86435	282
trnI-CAU	gene	translation-rna	−	86594	86668	74
ycf2	gene	other	+	86756	93566	6810
ycf15	gene	other	+	93707	93905	198
trnL-CAA	gene	translation-rna	−	94160	94241	81
ndhB	gene	nad-dehydrogenase	−	94783	96941	2158
rps7	gene	ribosomal-protein	−	97269	97737	468
trnV-GAC	gene	translation-rna	+	100158	100230	72
rrn16	gene	ribosomal-rna	+	100457	101948	1491
trnI-GAU	gene	translation-rna	+	102246	103268	1022
trnA-UGC	gene	translation-rna	+	103332	104217	885
rrn23	gene	ribosomal-rna	+	104386	107199	2813
rrn4.5	gene	ribosomal-rna	+	107297	107400	103
rrn5	gene	ribosomal-rna	+	107647	107768	121
trnR-ACG	gene	translation-rna	+	108002	108076	74
trnN-GUU	gene	translation-rna	−	108622	108694	72
ndhF	gene	nad-dehydrogenase	−	109763	112004	2241
rpl32	gene	ribosomal-protein	+	112520	112697	177
trnL-UAG	gene	translation-rna	+	113143	113223	80
ccsA	gene	other	+	113319	114294	975
ndhD	gene	nad-dehydrogenase	−	114526	116029	1503
psaC	gene	photosystem-i	−	116148	116394	246
ndhE	gene	nad-dehydrogenase	−	116655	116961	306
ndhG	gene	nad-dehydrogenase	−	117181	117712	531
ndhI	gene	nad-dehydrogenase	−	118075	118576	501
ndhA	gene	nad-dehydrogenase	−	118656	120756	2100
ndhH	gene	nad-dehydrogenase	−	120757	121939	1182
rps15	gene	ribosomal-protein	−	122041	122314	273
ycf1	gene	other	−	122584	128338	5754
trnN-GUU	gene	translation-rna	+	128450	128522	72
trnR-ACG	gene	translation-rna	−	129068	129142	74
rrn5	gene	ribosomal-rna	−	129376	129497	121
rrn4.5	gene	ribosomal-rna	−	129744	129847	103
rrn23	gene	ribosomal-rna	−	129945	132758	2813
trnI-GAU	gene	translation-rna	−	133877	134899	1022
ycf68	gene	other	−	134504	134744	240
rrn16	gene	ribosomal-rna	−	135197	136688	1491
trnV-GAC	gene	translation-rna	−	136915	136987	72
rps7	gene	ribosomal-protein	+	139408	139876	468
ndhB	gene	nad-dehydrogenase	+	140204	142362	2158
trnL-CAA	gene	translation-rna	+	142904	142985	81
ycf15	gene	other	−	143240	143438	198
ycf2	gene	other	−	143579	150389	6810
trnI-CAU	gene	translation-rna	+	150477	150551	74
rpl23	gene	ribosomal-protein	+	150710	150992	282
rpl2	gene	ribosomal-protein	+	151010	152493	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059346.1DNA · accDPQ059346DNA · atpBPQ059346DNA · matKPQ059346DNA · ndhFPQ059346DNA · psbAPQ059346DNA · rbcLPQ059346DNA · rps12PQ059346DNA · ycf1PQ059346