Coordinate-aware organelle record

Stachys affinis chloroplast genome

Available NC_062803.1 149,521 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	0	75	75
psbA	gene	photosystem-ii	−	224	1283	1059
trnK-UUU	gene	translation-rna	−	1517	4098	2581
matK	gene	other	−	1816	3346	1530
rps16	gene	ribosomal-protein	−	4652	5793	1141
trnQ-UUG	gene	translation-rna	−	6540	6612	72
psbK	gene	photosystem-ii	+	6948	7134	186
psbI	gene	photosystem-ii	+	7509	7620	111
trnS-GCU	gene	translation-rna	−	7741	7829	88
trnG-UCC	gene	translation-rna	+	8487	9247	760
trnR-UCU	gene	translation-rna	+	9410	9482	72
atpA	gene	atp-synthase	−	9578	11102	1524
atpF	gene	atp-synthase	−	11189	12401	1212
atpH	gene	atp-synthase	−	12767	13013	246
atpI	gene	atp-synthase	−	13968	14712	744
rps2	gene	ribosomal-protein	−	14942	15653	711
rpoC2	gene	rna-polymerase	−	15983	20072	4089
rpoC1	gene	rna-polymerase	−	20226	23063	2837
rpoB	gene	rna-polymerase	−	23089	26302	3213
trnC-GCA	gene	translation-rna	+	27403	27474	71
petN	gene	cytochrome	+	28308	28398	90
psbM	gene	photosystem-ii	−	28906	29011	105
trnD-GUC	gene	translation-rna	−	29529	29603	74
trnY-GUA	gene	translation-rna	−	29718	29802	84
trnE-UUC	gene	translation-rna	−	29861	29934	73
trnT-GGU	gene	translation-rna	+	30504	30576	72
psbD	gene	photosystem-ii	+	31527	32589	1062
psbC	gene	photosystem-ii	+	32536	33958	1422
trnS-UGA	gene	translation-rna	−	34186	34279	93
psbZ	gene	photosystem-ii	+	34606	34795	189
trnG-GCC	gene	translation-rna	+	35020	35091	71
trnfM-CAU	gene	translation-rna	−	35238	35312	74
rps14	gene	ribosomal-protein	−	35461	35764	303
psaB	gene	photosystem-i	−	35899	38104	2205
psaA	gene	photosystem-i	−	38129	40382	2253
ycf3	gene	other	−	41131	43074	1943
trnS-GGA	gene	translation-rna	+	43469	43556	87
rps4	gene	ribosomal-protein	−	43703	44309	606
trnT-UGU	gene	translation-rna	−	44694	44767	73
trnL-UAA	gene	translation-rna	+	45450	46032	582
trnF-GAA	gene	translation-rna	+	46327	46400	73
ndhJ	gene	nad-dehydrogenase	−	47059	47536	477
ndhK	gene	nad-dehydrogenase	−	47636	48314	678
ndhC	gene	nad-dehydrogenase	−	48367	48730	363
trnV-UAC	gene	translation-rna	−	49667	50320	653
trnM-CAU	gene	translation-rna	+	50508	50581	73
atpE	gene	atp-synthase	−	50794	51196	402
atpB	gene	atp-synthase	−	51192	52689	1497
rbcL	gene	other	+	53490	54936	1446
accD	gene	other	+	55636	57103	1467
psaI	gene	photosystem-i	+	57493	57604	111
ycf4	gene	other	+	58038	58593	555
cemA	gene	other	+	58858	59548	690
petA	gene	cytochrome	+	59771	60734	963
psbJ	gene	photosystem-ii	−	61717	61840	123
psbL	gene	photosystem-ii	−	61977	62094	117
psbF	gene	photosystem-ii	−	62117	62237	120
psbE	gene	photosystem-ii	−	62251	62503	252
petL	gene	cytochrome	+	63404	63500	96
petG	gene	cytochrome	+	63674	63788	114
trnW-CCA	gene	translation-rna	−	63913	63987	74
trnP-UGG	gene	translation-rna	−	64156	64230	74
psaJ	gene	photosystem-i	+	64502	64637	135
rpl33	gene	ribosomal-protein	+	65117	65318	201
rps18	gene	ribosomal-protein	+	65463	65769	306
rpl20	gene	ribosomal-protein	−	65985	66372	387
rps12	gene	ribosomal-protein	−	67105	95222	28117
rps12	gene	ribosomal-protein	+	67105	136231	69126
clpP	gene	other	−	67344	69200	1856
psbB	gene	photosystem-ii	+	69637	71164	1527
psbT	gene	photosystem-ii	+	71348	71459	111
psbN	gene	photosystem-ii	−	71532	71664	132
psbH	gene	photosystem-ii	+	71767	71989	222
petB	gene	cytochrome	+	72113	73486	1373
petD	gene	cytochrome	+	73680	74890	1210
rpoA	gene	rna-polymerase	−	75052	76066	1014
rps11	gene	ribosomal-protein	−	76137	76554	417
rpl36	gene	ribosomal-protein	−	76656	76770	114
infA	gene	other	−	76865	77099	234
rps8	gene	ribosomal-protein	−	77222	77636	414
rpl14	gene	ribosomal-protein	−	77803	78172	369
rpl16	gene	ribosomal-protein	−	78298	79592	1294
rps3	gene	ribosomal-protein	−	79745	80408	663
rpl22	gene	ribosomal-protein	−	80392	80857	465
rps19	gene	ribosomal-protein	−	80920	81199	279
rpl2	gene	ribosomal-protein	−	81250	82742	1492
rpl23	gene	ribosomal-protein	−	82760	83042	282
trnI-CAU	gene	translation-rna	−	83215	83289	74
ycf2	gene	other	+	83377	90244	6867
ycf15	gene	other	+	90286	90535	249
trnL-CAA	gene	translation-rna	−	90795	90876	81
ndhB	gene	nad-dehydrogenase	−	91421	93633	2212
rps7	gene	ribosomal-protein	−	93907	94375	468
trnV-GAC	gene	translation-rna	+	96827	96899	72
M0594_pgr008	gene	other	+	97126	98619	1493
trnI-GAU	gene	translation-rna	+	98910	99919	1009
trnA-UGC	gene	translation-rna	+	99983	100862	879
M0594_pgr007	gene	other	+	101053	103864	2811
M0594_pgr006	gene	other	+	103962	104065	103
M0594_pgr005	gene	other	+	104320	104441	121
trnR-ACG	gene	translation-rna	+	104675	104749	74
trnN-GUU	gene	translation-rna	−	105316	105388	72
ycf1	gene	other	+	105713	106772	1059
ndhF	gene	nad-dehydrogenase	−	106777	109006	2229
rpl32	gene	ribosomal-protein	+	109448	109625	177
trnL-UAG	gene	translation-rna	+	110127	110207	80
ccsA	gene	other	+	110294	111266	972
ndhD	gene	nad-dehydrogenase	−	111447	112968	1521
psaC	gene	photosystem-i	−	113071	113317	246
ndhE	gene	nad-dehydrogenase	−	113568	113874	306
ndhG	gene	nad-dehydrogenase	−	114083	114614	531
ndhI	gene	nad-dehydrogenase	−	114989	115496	507
ndhA	gene	nad-dehydrogenase	−	115575	117687	2112
ndhH	gene	nad-dehydrogenase	−	117688	118870	1182
rps15	gene	ribosomal-protein	−	118970	119243	273
ycf1	gene	other	−	119632	124954	5322
trnN-GUU	gene	translation-rna	+	125279	125351	72
trnR-ACG	gene	translation-rna	−	125918	125992	74
M0594_pgr004	gene	other	−	126226	126347	121
M0594_pgr003	gene	other	−	126602	126705	103
M0594_pgr002	gene	other	−	126803	129614	2811
trnA-UGC	gene	translation-rna	−	129805	130684	879
trnI-GAU	gene	translation-rna	−	130748	131757	1009
M0594_pgr001	gene	other	−	132050	133541	1491
trnV-GAC	gene	translation-rna	−	133768	133840	72
rps7	gene	ribosomal-protein	+	136284	136752	468
ndhB	gene	nad-dehydrogenase	+	137026	139238	2212
trnL-CAA	gene	translation-rna	+	139783	139864	81
ycf15	gene	other	−	140124	140373	249
ycf2	gene	other	−	140415	147300	6885
trnI-CAU	gene	translation-rna	+	147388	147462	74
rpl23	gene	ribosomal-protein	+	147635	147917	282
rpl2	gene	ribosomal-protein	+	147935	149427	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_062803.1DNA · accDNC_062803DNA · atpBNC_062803DNA · matKNC_062803DNA · ndhFNC_062803DNA · psbANC_062803DNA · rbcLNC_062803DNA · rps12NC_062803DNA · ycf1NC_062803