Stachys byzantina chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · NC_029825.1 · 1–75 bp · −
psbA · NC_029825.1 · 387–1,445 bp · −
trnK-UUU · NC_029825.1 · 1,678–4,254 bp · −
matK · NC_029825.1 · 1,977–3,506 bp · −
rps16 · NC_029825.1 · 4,907–6,047 bp · −
trnQ-UUG · NC_029825.1 · 6,748–6,819 bp · −
trnS-GCU · NC_029825.1 · 7,947–8,034 bp · −
atpA · NC_029825.1 · 9,828–11,351 bp · −
atpF · NC_029825.1 · 11,450–12,665 bp · −
atpH · NC_029825.1 · 13,034–13,279 bp · −
atpI · NC_029825.1 · 14,089–14,832 bp · −
rps2 · NC_029825.1 · 15,057–15,767 bp · −
rpoC2 · NC_029825.1 · 16,111–20,187 bp · −
rpoC1 · NC_029825.1 · 20,342–23,152 bp · −
rpoB · NC_029825.1 · 23,179–26,391 bp · −
psbM · NC_029825.1 · 28,975–29,079 bp · −
trnD-GUC · NC_029825.1 · 29,602–29,675 bp · −
trnY-GUA · NC_029825.1 · 29,791–29,874 bp · −
trnE-UUC · NC_029825.1 · 29,926–29,998 bp · −
trnS-UGA · NC_029825.1 · 34,376–34,468 bp · −
trnfM-CAU · NC_029825.1 · 35,417–35,490 bp · −
rps14 · NC_029825.1 · 35,640–35,942 bp · −
psaB · NC_029825.1 · 36,075–38,279 bp · −
psaA · NC_029825.1 · 38,305–40,557 bp · −
ycf3 · NC_029825.1 · 41,282–43,219 bp · −
rps4 · NC_029825.1 · 43,766–44,371 bp · −
trnT-UGU · NC_029825.1 · 44,767–44,839 bp · −
ndhJ · NC_029825.1 · 47,006–47,482 bp · −
ndhK · NC_029825.1 · 47,583–48,260 bp · −
ndhC · NC_029825.1 · 48,314–48,676 bp · −
trnV-UAC · NC_029825.1 · 49,628–50,279 bp · −
atpE · NC_029825.1 · 50,753–51,154 bp · −
atpB · NC_029825.1 · 51,151–52,647 bp · −
psbJ · NC_029825.1 · 61,772–61,894 bp · −
psbL · NC_029825.1 · 62,032–62,148 bp · −
psbF · NC_029825.1 · 62,172–62,291 bp · −
psbE · NC_029825.1 · 62,306–62,557 bp · −
trnW-CCA · NC_029825.1 · 63,979–64,052 bp · −
trnP-UGG · NC_029825.1 · 64,227–64,300 bp · −
rpl20 · NC_029825.1 · 66,056–66,442 bp · −
rps12 · NC_029825.1 · 67,186–67,299 bp · −
rps12 · NC_029825.1 · 94,542–95,335 bp · −
clpP · NC_029825.1 · 67,425–69,299 bp · −
psbN · NC_029825.1 · 71,636–71,767 bp · −
rpoA · NC_029825.1 · 75,163–76,176 bp · −
rps11 · NC_029825.1 · 76,248–76,664 bp · −
rpl36 · NC_029825.1 · 76,767–76,880 bp · −
infA · NC_029825.1 · 76,976–77,209 bp · −
rps8 · NC_029825.1 · 77,332–77,745 bp · −
rpl14 · NC_029825.1 · 77,913–78,281 bp · −
rpl16 · NC_029825.1 · 78,408–79,714 bp · −
rps3 · NC_029825.1 · 79,860–80,522 bp · −
rpl22 · NC_029825.1 · 80,507–80,971 bp · −
rps19 · NC_029825.1 · 81,035–81,313 bp · −
rpl2 · NC_029825.1 · 81,365–82,856 bp · −
rpl23 · NC_029825.1 · 82,875–83,156 bp · −
trnI-CAU · NC_029825.1 · 83,330–83,403 bp · −
trnL-CAA · NC_029825.1 · 90,910–90,990 bp · −
ndhB · NC_029825.1 · 91,535–93,746 bp · −
rps7 · NC_029825.1 · 94,021–94,488 bp · −
trnN-GUU · NC_029825.1 · 105,262–105,333 bp · −
ndhF · NC_029825.1 · 106,723–108,951 bp · −
ndhD · NC_029825.1 · 111,642–113,162 bp · −
psaC · NC_029825.1 · 113,266–113,511 bp · −
ndhE · NC_029825.1 · 113,763–114,068 bp · −
ndhG · NC_029825.1 · 114,278–114,808 bp · −
ndhI · NC_029825.1 · 115,167–115,673 bp · −
ndhA · NC_029825.1 · 115,753–117,884 bp · −
ndhH · NC_029825.1 · 117,886–119,067 bp · −
rps15 · NC_029825.1 · 119,168–119,440 bp · −
ycf1 · NC_029825.1 · 119,833–125,361 bp · −
trnR-ACG · NC_029825.1 · 126,326–126,399 bp · −
A4347_pgr004 · NC_029825.1 · 126,634–126,754 bp · −
A4347_pgr003 · NC_029825.1 · 127,010–127,112 bp · −
A4347_pgr002 · NC_029825.1 · 127,211–130,021 bp · −
trnA-UGC · NC_029825.1 · 130,213–131,091 bp · −
trnI-GAU · NC_029825.1 · 131,156–132,165 bp · −
A4347_pgr001 · NC_029825.1 · 132,455–133,945 bp · −
trnV-GAC · NC_029825.1 · 134,173–134,244 bp · −
ycf15 · NC_029825.1 · 140,371–140,619 bp · −
ycf2 · NC_029825.1 · 140,662–147,528 bp · −
psbK · NC_029825.1 · 7,154–7,339 bp · +
psbI · NC_029825.1 · 7,715–7,825 bp · +
trnG-UCC · NC_029825.1 · 8,741–9,499 bp · +
trnR-UCU · NC_029825.1 · 9,660–9,731 bp · +
trnC-GCA · NC_029825.1 · 27,493–27,563 bp · +
petN · NC_029825.1 · 28,401–28,490 bp · +
trnT-GGU · NC_029825.1 · 30,569–30,640 bp · +
psbD · NC_029825.1 · 31,716–32,777 bp · +
psbC · NC_029825.1 · 32,725–34,146 bp · +
psbZ · NC_029825.1 · 34,795–34,983 bp · +
trnG-GCC · NC_029825.1 · 35,207–35,277 bp · +
trnS-GGA · NC_029825.1 · 43,525–43,611 bp · +
trnL-UAA · NC_029825.1 · 45,510–46,083 bp · +
trnF-GAA · NC_029825.1 · 46,263–46,335 bp · +
trnM-CAU · NC_029825.1 · 50,468–50,540 bp · +
rbcL · NC_029825.1 · 53,442–54,887 bp · +
accD · NC_029825.1 · 55,579–57,036 bp · +
psaI · NC_029825.1 · 57,444–57,554 bp · +
ycf4 · NC_029825.1 · 57,993–58,547 bp · +
cemA · NC_029825.1 · 58,860–59,549 bp · +
petA · NC_029825.1 · 59,766–60,728 bp · +
petL · NC_029825.1 · 63,470–63,565 bp · +
petG · NC_029825.1 · 63,740–63,853 bp · +
psaJ · NC_029825.1 · 64,575–64,709 bp · +
rpl33 · NC_029825.1 · 65,187–65,387 bp · +
rps18 · NC_029825.1 · 65,533–65,838 bp · +
rps12 · NC_029825.1 · 135,685–136,478 bp · +
psbB · NC_029825.1 · 69,742–71,268 bp · +
psbT · NC_029825.1 · 71,452–71,562 bp · +
psbH · NC_029825.1 · 71,871–72,092 bp · +
petB · NC_029825.1 · 72,213–73,589 bp · +
petD · NC_029825.1 · 73,784–75,000 bp · +
ycf2 · NC_029825.1 · 83,492–90,358 bp · +
ycf15 · NC_029825.1 · 90,401–90,649 bp · +
trnV-GAC · NC_029825.1 · 96,776–96,847 bp · +
A4347_pgr008 · NC_029825.1 · 97,075–98,567 bp · +
trnI-GAU · NC_029825.1 · 98,855–99,864 bp · +
trnA-UGC · NC_029825.1 · 99,929–100,807 bp · +
A4347_pgr007 · NC_029825.1 · 100,999–103,809 bp · +
A4347_pgr006 · NC_029825.1 · 103,908–104,010 bp · +
A4347_pgr005 · NC_029825.1 · 104,266–104,386 bp · +
trnR-ACG · NC_029825.1 · 104,621–104,694 bp · +
ycf1 · NC_029825.1 · 105,659–106,717 bp · +
rpl32 · NC_029825.1 · 109,443–109,619 bp · +
trnL-UAG · NC_029825.1 · 110,328–110,407 bp · +
ccsA · NC_029825.1 · 110,488–111,459 bp · +
trnN-GUU · NC_029825.1 · 125,687–125,758 bp · +
rps7 · NC_029825.1 · 136,532–136,999 bp · +
ndhB · NC_029825.1 · 137,274–139,485 bp · +
trnL-CAA · NC_029825.1 · 140,030–140,110 bp · +
trnI-CAU · NC_029825.1 · 147,617–147,690 bp · +
rpl23 · NC_029825.1 · 147,864–148,145 bp · +
rpl2 · NC_029825.1 · 148,164–149,655 bp · +
0 kb
12 kb
24 kb
36 kb
48 kb
60 kb
72 kb
84 kb
96 kb
108 kb
120 kb
132 kb
144 kb
Stachys byzantina
ANNOTATED PLASTOME
NC_029825.1
149,749 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
0 37437 74874 112312 149749 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC A4347_pgr008 trnI-GAU trnA-UGC A4347_pgr007 A4347_pgr006 A4347_pgr005 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG A4347_pgr004 A4347_pgr003 A4347_pgr002 trnA-UGC trnI-GAU A4347_pgr001 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 1 75 75 Locate
psbA gene − 387 1445 1059 Locate
trnK-UUU gene − 1678 4254 2577 Locate
matK gene − 1977 3506 1530 Locate
rps16 gene − 4907 6047 1141 Locate
trnQ-UUG gene − 6748 6819 72 Locate
psbK gene + 7154 7339 186 Locate
psbI gene + 7715 7825 111 Locate
trnS-GCU gene − 7947 8034 88 Locate
trnG-UCC gene + 8741 9499 759 Locate
trnR-UCU gene + 9660 9731 72 Locate
atpA gene − 9828 11351 1524 Locate
atpF gene − 11450 12665 1216 Locate
atpH gene − 13034 13279 246 Locate
atpI gene − 14089 14832 744 Locate
rps2 gene − 15057 15767 711 Locate
rpoC2 gene − 16111 20187 4077 Locate
rpoC1 gene − 20342 23152 2811 Locate
rpoB gene − 23179 26391 3213 Locate
trnC-GCA gene + 27493 27563 71 Locate
petN gene + 28401 28490 90 Locate
psbM gene − 28975 29079 105 Locate
trnD-GUC gene − 29602 29675 74 Locate
trnY-GUA gene − 29791 29874 84 Locate
trnE-UUC gene − 29926 29998 73 Locate
trnT-GGU gene + 30569 30640 72 Locate
psbD gene + 31716 32777 1062 Locate
psbC gene + 32725 34146 1422 Locate
trnS-UGA gene − 34376 34468 93 Locate
psbZ gene + 34795 34983 189 Locate
trnG-GCC gene + 35207 35277 71 Locate
trnfM-CAU gene − 35417 35490 74 Locate
rps14 gene − 35640 35942 303 Locate
psaB gene − 36075 38279 2205 Locate
psaA gene − 38305 40557 2253 Locate
ycf3 gene − 41282 43219 1938 Locate
trnS-GGA gene + 43525 43611 87 Locate
rps4 gene − 43766 44371 606 Locate
trnT-UGU gene − 44767 44839 73 Locate
trnL-UAA gene + 45510 46083 574 Locate
trnF-GAA gene + 46263 46335 73 Locate
ndhJ gene − 47006 47482 477 Locate
ndhK gene − 47583 48260 678 Locate
ndhC gene − 48314 48676 363 Locate
trnV-UAC gene − 49628 50279 652 Locate
trnM-CAU gene + 50468 50540 73 Locate
atpE gene − 50753 51154 402 Locate
atpB gene − 51151 52647 1497 Locate
rbcL gene + 53442 54887 1446 Locate
accD gene + 55579 57036 1458 Locate
psaI gene + 57444 57554 111 Locate
ycf4 gene + 57993 58547 555 Locate
cemA gene + 58860 59549 690 Locate
petA gene + 59766 60728 963 Locate
psbJ gene − 61772 61894 123 Locate
psbL gene − 62032 62148 117 Locate
psbF gene − 62172 62291 120 Locate
psbE gene − 62306 62557 252 Locate
petL gene + 63470 63565 96 Locate
petG gene + 63740 63853 114 Locate
trnW-CCA gene − 63979 64052 74 Locate
trnP-UGG gene − 64227 64300 74 Locate
psaJ gene + 64575 64709 135 Locate
rpl33 gene + 65187 65387 201 Locate
rps18 gene + 65533 65838 306 Locate
rpl20 gene − 66056 66442 387 Locate
rps12 gene − 67186 67299 114 Locate
clpP gene − 67425 69299 1875 Locate
psbB gene + 69742 71268 1527 Locate
psbT gene + 71452 71562 111 Locate
psbN gene − 71636 71767 132 Locate
psbH gene + 71871 72092 222 Locate
petB gene + 72213 73589 1377 Locate
petD gene + 73784 75000 1217 Locate
rpoA gene − 75163 76176 1014 Locate
rps11 gene − 76248 76664 417 Locate
rpl36 gene − 76767 76880 114 Locate
infA gene − 76976 77209 234 Locate
rps8 gene − 77332 77745 414 Locate
rpl14 gene − 77913 78281 369 Locate
rpl16 gene − 78408 79714 1307 Locate
rps3 gene − 79860 80522 663 Locate
rpl22 gene − 80507 80971 465 Locate
rps19 gene − 81035 81313 279 Locate
rpl2 gene − 81365 82856 1492 Locate
rpl23 gene − 82875 83156 282 Locate
trnI-CAU gene − 83330 83403 74 Locate
ycf2 gene + 83492 90358 6867 Locate
ycf15 gene + 90401 90649 249 Locate
trnL-CAA gene − 90910 90990 81 Locate
ndhB gene − 91535 93746 2212 Locate
rps7 gene − 94021 94488 468 Locate
rps12 gene − 94542 95335 794 Locate
trnV-GAC gene + 96776 96847 72 Locate
A4347_pgr008 gene + 97075 98567 1493 Locate
trnI-GAU gene + 98855 99864 1010 Locate
trnA-UGC gene + 99929 100807 879 Locate
A4347_pgr007 gene + 100999 103809 2811 Locate
A4347_pgr006 gene + 103908 104010 103 Locate
A4347_pgr005 gene + 104266 104386 121 Locate
trnR-ACG gene + 104621 104694 74 Locate
trnN-GUU gene − 105262 105333 72 Locate
ycf1 gene + 105659 106717 1059 Locate
ndhF gene − 106723 108951 2229 Locate
rpl32 gene + 109443 109619 177 Locate
trnL-UAG gene + 110328 110407 80 Locate
ccsA gene + 110488 111459 972 Locate
ndhD gene − 111642 113162 1521 Locate
psaC gene − 113266 113511 246 Locate
ndhE gene − 113763 114068 306 Locate
ndhG gene − 114278 114808 531 Locate
ndhI gene − 115167 115673 507 Locate
ndhA gene − 115753 117884 2132 Locate
ndhH gene − 117886 119067 1182 Locate
rps15 gene − 119168 119440 273 Locate
ycf1 gene − 119833 125361 5529 Locate
trnN-GUU gene + 125687 125758 72 Locate
trnR-ACG gene − 126326 126399 74 Locate
A4347_pgr004 gene − 126634 126754 121 Locate
A4347_pgr003 gene − 127010 127112 103 Locate
A4347_pgr002 gene − 127211 130021 2811 Locate
trnA-UGC gene − 130213 131091 879 Locate
trnI-GAU gene − 131156 132165 1010 Locate
A4347_pgr001 gene − 132455 133945 1491 Locate
trnV-GAC gene − 134173 134244 72 Locate
rps12 gene + 135685 136478 794 Locate
rps7 gene + 136532 136999 468 Locate
ndhB gene + 137274 139485 2212 Locate
trnL-CAA gene + 140030 140110 81 Locate
ycf15 gene − 140371 140619 249 Locate
ycf2 gene − 140662 147528 6867 Locate
trnI-CAU gene + 147617 147690 74 Locate
rpl23 gene + 147864 148145 282 Locate
rpl2 gene + 148164 149655 1492 Locate
Status Available
Accession NC_029825.1
Length 149,749 bp
GC content 38.5%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 23 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources