Coordinate-aware organelle record

Stachys byzantina chloroplast genome

Available NC_029825.1 149,749 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	0	75	75
psbA	gene	photosystem-ii	−	386	1445	1059
trnK-UUU	gene	translation-rna	−	1677	4254	2577
matK	gene	other	−	1976	3506	1530
rps16	gene	ribosomal-protein	−	4906	6047	1141
trnQ-UUG	gene	translation-rna	−	6747	6819	72
psbK	gene	photosystem-ii	+	7153	7339	186
psbI	gene	photosystem-ii	+	7714	7825	111
trnS-GCU	gene	translation-rna	−	7946	8034	88
trnG-UCC	gene	translation-rna	+	8740	9499	759
trnR-UCU	gene	translation-rna	+	9659	9731	72
atpA	gene	atp-synthase	−	9827	11351	1524
atpF	gene	atp-synthase	−	11449	12665	1216
atpH	gene	atp-synthase	−	13033	13279	246
atpI	gene	atp-synthase	−	14088	14832	744
rps2	gene	ribosomal-protein	−	15056	15767	711
rpoC2	gene	rna-polymerase	−	16110	20187	4077
rpoC1	gene	rna-polymerase	−	20341	23152	2811
rpoB	gene	rna-polymerase	−	23178	26391	3213
trnC-GCA	gene	translation-rna	+	27492	27563	71
petN	gene	cytochrome	+	28400	28490	90
psbM	gene	photosystem-ii	−	28974	29079	105
trnD-GUC	gene	translation-rna	−	29601	29675	74
trnY-GUA	gene	translation-rna	−	29790	29874	84
trnE-UUC	gene	translation-rna	−	29925	29998	73
trnT-GGU	gene	translation-rna	+	30568	30640	72
psbD	gene	photosystem-ii	+	31715	32777	1062
psbC	gene	photosystem-ii	+	32724	34146	1422
trnS-UGA	gene	translation-rna	−	34375	34468	93
psbZ	gene	photosystem-ii	+	34794	34983	189
trnG-GCC	gene	translation-rna	+	35206	35277	71
trnfM-CAU	gene	translation-rna	−	35416	35490	74
rps14	gene	ribosomal-protein	−	35639	35942	303
psaB	gene	photosystem-i	−	36074	38279	2205
psaA	gene	photosystem-i	−	38304	40557	2253
ycf3	gene	other	−	41281	43219	1938
trnS-GGA	gene	translation-rna	+	43524	43611	87
rps4	gene	ribosomal-protein	−	43765	44371	606
trnT-UGU	gene	translation-rna	−	44766	44839	73
trnL-UAA	gene	translation-rna	+	45509	46083	574
trnF-GAA	gene	translation-rna	+	46262	46335	73
ndhJ	gene	nad-dehydrogenase	−	47005	47482	477
ndhK	gene	nad-dehydrogenase	−	47582	48260	678
ndhC	gene	nad-dehydrogenase	−	48313	48676	363
trnV-UAC	gene	translation-rna	−	49627	50279	652
trnM-CAU	gene	translation-rna	+	50467	50540	73
atpE	gene	atp-synthase	−	50752	51154	402
atpB	gene	atp-synthase	−	51150	52647	1497
rbcL	gene	other	+	53441	54887	1446
accD	gene	other	+	55578	57036	1458
psaI	gene	photosystem-i	+	57443	57554	111
ycf4	gene	other	+	57992	58547	555
cemA	gene	other	+	58859	59549	690
petA	gene	cytochrome	+	59765	60728	963
psbJ	gene	photosystem-ii	−	61771	61894	123
psbL	gene	photosystem-ii	−	62031	62148	117
psbF	gene	photosystem-ii	−	62171	62291	120
psbE	gene	photosystem-ii	−	62305	62557	252
petL	gene	cytochrome	+	63469	63565	96
petG	gene	cytochrome	+	63739	63853	114
trnW-CCA	gene	translation-rna	−	63978	64052	74
trnP-UGG	gene	translation-rna	−	64226	64300	74
psaJ	gene	photosystem-i	+	64574	64709	135
rpl33	gene	ribosomal-protein	+	65186	65387	201
rps18	gene	ribosomal-protein	+	65532	65838	306
rpl20	gene	ribosomal-protein	−	66055	66442	387
rps12	gene	ribosomal-protein	−	67185	95335	28150
rps12	gene	ribosomal-protein	+	67185	136478	69293
clpP	gene	other	−	67424	69299	1875
psbB	gene	photosystem-ii	+	69741	71268	1527
psbT	gene	photosystem-ii	+	71451	71562	111
psbN	gene	photosystem-ii	−	71635	71767	132
psbH	gene	photosystem-ii	+	71870	72092	222
petB	gene	cytochrome	+	72212	73589	1377
petD	gene	cytochrome	+	73783	75000	1217
rpoA	gene	rna-polymerase	−	75162	76176	1014
rps11	gene	ribosomal-protein	−	76247	76664	417
rpl36	gene	ribosomal-protein	−	76766	76880	114
infA	gene	other	−	76975	77209	234
rps8	gene	ribosomal-protein	−	77331	77745	414
rpl14	gene	ribosomal-protein	−	77912	78281	369
rpl16	gene	ribosomal-protein	−	78407	79714	1307
rps3	gene	ribosomal-protein	−	79859	80522	663
rpl22	gene	ribosomal-protein	−	80506	80971	465
rps19	gene	ribosomal-protein	−	81034	81313	279
rpl2	gene	ribosomal-protein	−	81364	82856	1492
rpl23	gene	ribosomal-protein	−	82874	83156	282
trnI-CAU	gene	translation-rna	−	83329	83403	74
ycf2	gene	other	+	83491	90358	6867
ycf15	gene	other	+	90400	90649	249
trnL-CAA	gene	translation-rna	−	90909	90990	81
ndhB	gene	nad-dehydrogenase	−	91534	93746	2212
rps7	gene	ribosomal-protein	−	94020	94488	468
trnV-GAC	gene	translation-rna	+	96775	96847	72
A4347_pgr008	gene	other	+	97074	98567	1493
trnI-GAU	gene	translation-rna	+	98854	99864	1010
trnA-UGC	gene	translation-rna	+	99928	100807	879
A4347_pgr007	gene	other	+	100998	103809	2811
A4347_pgr006	gene	other	+	103907	104010	103
A4347_pgr005	gene	other	+	104265	104386	121
trnR-ACG	gene	translation-rna	+	104620	104694	74
trnN-GUU	gene	translation-rna	−	105261	105333	72
ycf1	gene	other	+	105658	106717	1059
ndhF	gene	nad-dehydrogenase	−	106722	108951	2229
rpl32	gene	ribosomal-protein	+	109442	109619	177
trnL-UAG	gene	translation-rna	+	110327	110407	80
ccsA	gene	other	+	110487	111459	972
ndhD	gene	nad-dehydrogenase	−	111641	113162	1521
psaC	gene	photosystem-i	−	113265	113511	246
ndhE	gene	nad-dehydrogenase	−	113762	114068	306
ndhG	gene	nad-dehydrogenase	−	114277	114808	531
ndhI	gene	nad-dehydrogenase	−	115166	115673	507
ndhA	gene	nad-dehydrogenase	−	115752	117884	2132
ndhH	gene	nad-dehydrogenase	−	117885	119067	1182
rps15	gene	ribosomal-protein	−	119167	119440	273
ycf1	gene	other	−	119832	125361	5529
trnN-GUU	gene	translation-rna	+	125686	125758	72
trnR-ACG	gene	translation-rna	−	126325	126399	74
A4347_pgr004	gene	other	−	126633	126754	121
A4347_pgr003	gene	other	−	127009	127112	103
A4347_pgr002	gene	other	−	127210	130021	2811
trnA-UGC	gene	translation-rna	−	130212	131091	879
trnI-GAU	gene	translation-rna	−	131155	132165	1010
A4347_pgr001	gene	other	−	132454	133945	1491
trnV-GAC	gene	translation-rna	−	134172	134244	72
rps7	gene	ribosomal-protein	+	136531	136999	468
ndhB	gene	nad-dehydrogenase	+	137273	139485	2212
trnL-CAA	gene	translation-rna	+	140029	140110	81
ycf15	gene	other	−	140370	140619	249
ycf2	gene	other	−	140661	147528	6867
trnI-CAU	gene	translation-rna	+	147616	147690	74
rpl23	gene	ribosomal-protein	+	147863	148145	282
rpl2	gene	ribosomal-protein	+	148163	149655	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_029825.1DNA · accDNC_029825DNA · atpBNC_029825DNA · matKNC_029825DNA · ndhFNC_029825DNA · psbANC_029825DNA · rbcLNC_029825DNA · rps12NC_029825DNA · ycf1NC_029825