Coordinate-aware organelle record

Stachys chamissonis chloroplast genome

Available NC_029822.1 150,254 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	0	75	75
psbA	gene	photosystem-ii	−	395	1454	1059
trnK-UUU	gene	translation-rna	−	1698	4278	2580
matK	gene	other	−	1997	3527	1530
rps16	gene	ribosomal-protein	−	4916	6057	1141
trnQ-UUG	gene	translation-rna	−	6885	6957	72
psbK	gene	photosystem-ii	+	7293	7479	186
psbI	gene	photosystem-ii	+	7853	7964	111
trnS-GCU	gene	translation-rna	−	8085	8173	88
trnG-UCC	gene	translation-rna	+	8867	9627	760
trnR-UCU	gene	translation-rna	+	9787	9859	72
atpA	gene	atp-synthase	−	9955	11479	1524
atpF	gene	atp-synthase	−	11566	12776	1210
atpH	gene	atp-synthase	−	13141	13387	246
atpI	gene	atp-synthase	−	14362	15106	744
rps2	gene	ribosomal-protein	−	15336	16047	711
rpoC2	gene	rna-polymerase	−	16384	20467	4083
rpoC1	gene	rna-polymerase	−	20621	23458	2837
rpoB	gene	rna-polymerase	−	23484	26697	3213
trnC-GCA	gene	translation-rna	+	27801	27872	71
petN	gene	cytochrome	+	28707	28797	90
psbM	gene	photosystem-ii	−	29306	29411	105
trnD-GUC	gene	translation-rna	−	29929	30003	74
trnY-GUA	gene	translation-rna	−	30118	30202	84
trnE-UUC	gene	translation-rna	−	30261	30334	73
trnT-GGU	gene	translation-rna	+	30904	30976	72
psbD	gene	photosystem-ii	+	32051	33113	1062
psbC	gene	photosystem-ii	+	33060	34482	1422
trnS-UGA	gene	translation-rna	−	34713	34806	93
psbZ	gene	photosystem-ii	+	35134	35323	189
trnG-GCC	gene	translation-rna	+	35547	35618	71
trnfM-CAU	gene	translation-rna	−	35767	35841	74
rps14	gene	ribosomal-protein	−	35990	36293	303
psaB	gene	photosystem-i	−	36428	38633	2205
psaA	gene	photosystem-i	−	38658	40911	2253
ycf3	gene	other	−	41641	43583	1942
trnS-GGA	gene	translation-rna	+	43899	43986	87
rps4	gene	ribosomal-protein	−	44148	44754	606
trnT-UGU	gene	translation-rna	−	45139	45212	73
trnL-UAA	gene	translation-rna	+	45902	46476	574
trnF-GAA	gene	translation-rna	+	46771	46844	73
ndhJ	gene	nad-dehydrogenase	−	47502	47979	477
ndhK	gene	nad-dehydrogenase	−	48079	48757	678
ndhC	gene	nad-dehydrogenase	−	48810	49173	363
trnV-UAC	gene	translation-rna	−	50117	50764	647
trnM-CAU	gene	translation-rna	+	50952	51025	73
atpE	gene	atp-synthase	−	51238	51640	402
atpB	gene	atp-synthase	−	51636	53133	1497
rbcL	gene	other	+	53935	55381	1446
accD	gene	other	+	56084	57551	1467
psaI	gene	photosystem-i	+	57948	58059	111
ycf4	gene	other	+	58493	59048	555
cemA	gene	other	+	59354	60044	690
petA	gene	cytochrome	+	60261	61224	963
psbJ	gene	photosystem-ii	−	62267	62390	123
psbL	gene	photosystem-ii	−	62527	62644	117
psbF	gene	photosystem-ii	−	62667	62787	120
psbE	gene	photosystem-ii	−	62801	63053	252
petL	gene	cytochrome	+	63968	64064	96
petG	gene	cytochrome	+	64238	64352	114
trnW-CCA	gene	translation-rna	−	64477	64551	74
trnP-UGG	gene	translation-rna	−	64720	64794	74
psaJ	gene	photosystem-i	+	65064	65199	135
rpl33	gene	ribosomal-protein	+	65678	65879	201
rps18	gene	ribosomal-protein	+	66025	66331	306
rpl20	gene	ribosomal-protein	−	66547	66934	387
rps12	gene	ribosomal-protein	−	67673	95797	28124
rps12	gene	ribosomal-protein	+	67673	136992	69319
clpP	gene	other	−	67912	69775	1863
psbB	gene	photosystem-ii	+	70212	71739	1527
psbT	gene	photosystem-ii	+	71923	72034	111
psbN	gene	photosystem-ii	−	72107	72239	132
psbH	gene	photosystem-ii	+	72342	72564	222
petB	gene	cytochrome	+	72688	74062	1374
petD	gene	cytochrome	+	74256	75466	1210
rpoA	gene	rna-polymerase	−	75628	76642	1014
rps11	gene	ribosomal-protein	−	76720	77137	417
rpl36	gene	ribosomal-protein	−	77239	77353	114
infA	gene	other	−	77448	77682	234
rps8	gene	ribosomal-protein	−	77805	78219	414
rpl14	gene	ribosomal-protein	−	78392	78761	369
rpl16	gene	ribosomal-protein	−	78887	80189	1302
rps3	gene	ribosomal-protein	−	80330	80993	663
rpl22	gene	ribosomal-protein	−	80977	81442	465
rps19	gene	ribosomal-protein	−	81505	81784	279
rpl2	gene	ribosomal-protein	−	81835	83317	1482
rpl23	gene	ribosomal-protein	−	83335	83617	282
trnI-CAU	gene	translation-rna	−	83790	83864	74
ycf2	gene	other	+	83952	90819	6867
ycf15	gene	other	+	90861	91110	249
trnL-CAA	gene	translation-rna	−	91370	91451	81
ndhB	gene	nad-dehydrogenase	−	91996	94208	2212
rps7	gene	ribosomal-protein	−	94482	94950	468
trnV-GAC	gene	translation-rna	+	97250	97322	72
A4350_pgr008	gene	other	+	97549	99042	1493
trnI-GAU	gene	translation-rna	+	99333	100342	1009
trnA-UGC	gene	translation-rna	+	100406	101285	879
A4350_pgr007	gene	other	+	101484	104295	2811
A4350_pgr006	gene	other	+	104393	104496	103
A4350_pgr005	gene	other	+	104751	104872	121
trnR-ACG	gene	translation-rna	+	105106	105180	74
trnN-GUU	gene	translation-rna	−	105747	105819	72
ycf1	gene	other	+	106144	107203	1059
ndhF	gene	nad-dehydrogenase	−	107208	109437	2229
rpl32	gene	ribosomal-protein	+	109930	110107	177
trnL-UAG	gene	translation-rna	+	110842	110922	80
ccsA	gene	other	+	111002	111974	972
ndhD	gene	nad-dehydrogenase	−	112154	113675	1521
psaC	gene	photosystem-i	−	113778	114024	246
ndhE	gene	nad-dehydrogenase	−	114275	114581	306
ndhG	gene	nad-dehydrogenase	−	114790	115321	531
ndhI	gene	nad-dehydrogenase	−	115696	116203	507
ndhA	gene	nad-dehydrogenase	−	116282	118393	2111
ndhH	gene	nad-dehydrogenase	−	118394	119576	1182
rps15	gene	ribosomal-protein	−	119676	119949	273
ycf1	gene	other	−	120338	125882	5544
trnN-GUU	gene	translation-rna	+	126207	126279	72
trnR-ACG	gene	translation-rna	−	126846	126920	74
A4350_pgr004	gene	other	−	127154	127275	121
A4350_pgr003	gene	other	−	127499	127602	103
A4350_pgr002	gene	other	−	127700	130511	2811
trnA-UGC	gene	translation-rna	−	130710	131589	879
trnI-GAU	gene	translation-rna	−	131653	132662	1009
A4350_pgr001	gene	other	−	132955	134446	1491
trnV-GAC	gene	translation-rna	−	134673	134745	72
rps7	gene	ribosomal-protein	+	137045	137513	468
ndhB	gene	nad-dehydrogenase	+	137787	139999	2212
trnL-CAA	gene	translation-rna	+	140544	140625	81
ycf15	gene	other	−	140885	141134	249
ycf2	gene	other	−	141176	148043	6867
trnI-CAU	gene	translation-rna	+	148131	148205	74
rpl23	gene	ribosomal-protein	+	148378	148660	282
rpl2	gene	ribosomal-protein	+	148678	150160	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_029822.1DNA · accDNC_029822DNA · atpBNC_029822DNA · matKNC_029822DNA · ndhFNC_029822DNA · psbANC_029822DNA · rbcLNC_029822DNA · rps12NC_029822DNA · ycf1NC_029822