Coordinate-aware organelle record

Stachys germanica chloroplast genome

Available PX260186.1 150,238 bp 131 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

131 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	76	75
psbA	gene	photosystem-ii	−	507	1566	1059
trnK-UUU	gene	translation-rna	−	1798	4375	2577
matK	gene	other	−	2097	3627	1530
rps16	gene	ribosomal-protein	−	5055	6182	1127
trnQ-UUG	gene	translation-rna	−	6883	6956	73
psbK	gene	photosystem-ii	+	7290	7476	186
psbI	gene	photosystem-ii	+	7854	7965	111
trnS-GCU	gene	translation-rna	−	8086	8174	88
trnG-UCC	gene	translation-rna	+	8883	9642	759
trnR-UCU	gene	translation-rna	+	9825	9900	75
atpA	gene	atp-synthase	−	9996	11520	1524
atpF	gene	atp-synthase	−	11625	12829	1204
atpH	gene	atp-synthase	−	13198	13444	246
atpI	gene	atp-synthase	−	14250	14994	744
rps2	gene	ribosomal-protein	−	15218	15929	711
rpoC2	gene	rna-polymerase	−	16299	20349	4050
rpoC1	gene	rna-polymerase	−	20503	23314	2811
rpoB	gene	rna-polymerase	−	23340	26553	3213
trnC-GCA	gene	translation-rna	+	27651	27727	76
petN	gene	cytochrome	+	28561	28651	90
psbM	gene	photosystem-ii	−	29135	29240	105
trnD-GUC	gene	translation-rna	−	29762	29836	74
trnY-GUA	gene	translation-rna	−	29951	30035	84
trnE-UUC	gene	translation-rna	−	30086	30159	73
trnT-GGU	gene	translation-rna	+	30729	30800	71
psbD	gene	photosystem-ii	+	31885	32947	1062
psbC	gene	photosystem-ii	+	32894	34316	1422
trnS-UGA	gene	translation-rna	−	34545	34638	93
psbZ	gene	photosystem-ii	+	34964	35153	189
trnG-GCC	gene	translation-rna	+	35376	35447	71
trnfM-CAU	gene	translation-rna	−	35586	35660	74
rps14	gene	ribosomal-protein	−	35809	36112	303
psaB	gene	photosystem-i	−	36244	38449	2205
psaA	gene	photosystem-i	−	38474	40727	2253
ycf3	gene	other	−	41465	43406	1941
trnS-GGA	gene	translation-rna	+	43711	43798	87
rps4	gene	ribosomal-protein	−	43952	44558	606
trnT-UGU	gene	translation-rna	−	44978	45051	73
trnL-UAA	gene	translation-rna	+	45724	46298	574
trnF-GAA	gene	translation-rna	+	46478	46551	73
ndhJ	gene	nad-dehydrogenase	−	47221	47716	495
ndhK	gene	nad-dehydrogenase	−	47798	48476	678
ndhC	gene	nad-dehydrogenase	−	48529	48892	363
trnV-UAC	gene	translation-rna	−	49840	50493	653
trnM-CAU	gene	translation-rna	+	50681	50754	73
atpE	gene	atp-synthase	−	50966	51368	402
atpB	gene	atp-synthase	−	51388	52861	1473
rbcL	gene	other	+	53636	55103	1467
accD	gene	other	+	55786	57244	1458
psaI	gene	photosystem-i	+	57651	57762	111
ycf4	gene	other	+	58200	58755	555
cemA	gene	other	+	59067	59757	690
petA	gene	cytochrome	+	59973	60936	963
psbJ	gene	photosystem-ii	−	61982	62105	123
psbL	gene	photosystem-ii	−	62242	62359	117
psbF	gene	photosystem-ii	−	62382	62502	120
psbE	gene	photosystem-ii	−	62516	62768	252
petL	gene	cytochrome	+	63689	63785	96
petG	gene	cytochrome	+	63959	64073	114
trnW-CCA	gene	translation-rna	−	64198	64272	74
trnP-UGG	gene	translation-rna	−	64446	64520	74
psaJ	gene	photosystem-i	+	64794	64929	135
rpl33	gene	ribosomal-protein	+	65406	65607	201
rps18	gene	ribosomal-protein	+	65719	66058	339
rpl20	gene	ribosomal-protein	−	66268	66655	387
rps12	gene	ribosomal-protein	−	67397	95555	28158
rps12	gene	ribosomal-protein	+	67397	136968	69571
clpP	gene	other	−	67636	69508	1872
psbB	gene	photosystem-ii	+	69950	71477	1527
psbT	gene	photosystem-ii	+	71670	71772	102
psbN	gene	photosystem-ii	−	71845	71977	132
psbH	gene	photosystem-ii	+	72080	72302	222
petB	gene	cytochrome	+	72422	73802	1380
petD	gene	cytochrome	+	73996	75209	1213
rpoA	gene	rna-polymerase	−	75371	76385	1014
rps11	gene	ribosomal-protein	−	76456	76888	432
rpl36	gene	ribosomal-protein	−	76975	77089	114
infA	gene	other	−	77184	77418	234
rps8	gene	ribosomal-protein	−	77541	77955	414
rpl14	gene	ribosomal-protein	−	78122	78491	369
rpl16	gene	ribosomal-protein	−	78617	79927	1310
rps3	gene	ribosomal-protein	−	80079	80742	663
rpl22	gene	ribosomal-protein	−	80726	81191	465
rps19	gene	ribosomal-protein	−	81254	81533	279
rpl2	gene	ribosomal-protein	−	81584	83076	1492
rpl23	gene	ribosomal-protein	−	83094	83376	282
trnI-CAU	gene	translation-rna	−	83549	83623	74
ycf2	gene	other	+	83711	90578	6867
trnL-CAA	gene	translation-rna	−	91129	91210	81
ndhB	gene	nad-dehydrogenase	−	91754	93966	2212
rps7	gene	ribosomal-protein	−	94240	94708	468
trnV-GAC	gene	translation-rna	+	97157	97229	72
rrn16	gene	ribosomal-rna	+	97456	98947	1491
trnI-GAU	gene	translation-rna	+	99236	100246	1010
trnA-UGC	gene	translation-rna	+	100310	101189	879
rrn23	gene	ribosomal-rna	+	101381	104191	2810
rrn4.5	gene	ribosomal-rna	+	104289	104392	103
rrn5	gene	ribosomal-rna	+	104647	104768	121
trnR-ACG	gene	translation-rna	+	105002	105076	74
trnN-GUU	gene	translation-rna	−	105636	105708	72
ndhF	gene	nad-dehydrogenase	−	107097	109326	2229
rpl32	gene	ribosomal-protein	+	109760	109937	177
trnL-UAG	gene	translation-rna	+	110631	110711	80
ccsA	gene	other	+	110797	111769	972
ndhD	gene	nad-dehydrogenase	−	111951	113472	1521
psaC	gene	photosystem-i	−	113576	113822	246
ndhE	gene	nad-dehydrogenase	−	114073	114379	306
ndhG	gene	nad-dehydrogenase	−	114588	115119	531
ndhI	gene	nad-dehydrogenase	−	115477	115984	507
ndhA	gene	nad-dehydrogenase	−	116063	118219	2156
ndhH	gene	nad-dehydrogenase	−	118220	119402	1182
rps15	gene	ribosomal-protein	−	119502	119775	273
ycf1	gene	other	−	120167	125696	5529
trnN-GUU	gene	translation-rna	+	126021	126093	72
trnR-ACG	gene	translation-rna	−	126653	126727	74
rrn5	gene	ribosomal-rna	−	126961	127082	121
rrn4.5	gene	ribosomal-rna	−	127337	127440	103
rrn23	gene	ribosomal-rna	−	127538	130348	2810
trnA-UGC	gene	translation-rna	−	130540	131419	879
trnI-GAU	gene	translation-rna	−	131483	132493	1010
rrn16	gene	ribosomal-rna	−	132782	134273	1491
trnV-GAC	gene	translation-rna	−	134500	134572	72
rps7	gene	ribosomal-protein	+	137021	137489	468
ndhB	gene	nad-dehydrogenase	+	137763	139975	2212
trnL-CAA	gene	translation-rna	+	140519	140600	81
ycf15	gene	other	−	140860	141124	264
ycf2	gene	other	−	141151	148018	6867
trnI-CAU	gene	translation-rna	+	148106	148180	74
rpl23	gene	ribosomal-protein	+	148353	148635	282
rpl2	gene	ribosomal-protein	+	148653	150145	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePX260186.1DNA · accDPX260186DNA · atpBPX260186DNA · matKPX260186DNA · ndhFPX260186DNA · psbAPX260186DNA · rbcLPX260186DNA · rps12PX260186DNA · ycf1PX260186