Stachys persica chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PX260185.1 · 2–76 bp · −
psbA · PX260185.1 · 509–1,567 bp · −
trnK-UUU · PX260185.1 · 1,800–4,381 bp · −
matK · PX260185.1 · 2,099–3,628 bp · −
rps16 · PX260185.1 · 5,061–6,186 bp · −
trnQ-UUG · PX260185.1 · 6,887–6,959 bp · −
trnS-GCU · PX260185.1 · 8,090–8,177 bp · −
atpA · PX260185.1 · 9,973–11,496 bp · −
atpF · PX260185.1 · 11,602–12,809 bp · −
atpH · PX260185.1 · 13,181–13,426 bp · −
atpI · PX260185.1 · 14,236–14,979 bp · −
rps2 · PX260185.1 · 15,204–15,914 bp · −
rpoC2 · PX260185.1 · 16,258–20,334 bp · −
rpoC1 · PX260185.1 · 20,489–23,298 bp · −
rpoB · PX260185.1 · 23,325–26,537 bp · −
psbM · PX260185.1 · 29,125–29,229 bp · −
trnD-GUC · PX260185.1 · 29,752–29,825 bp · −
trnY-GUA · PX260185.1 · 29,941–30,024 bp · −
trnE-UUC · PX260185.1 · 30,076–30,148 bp · −
trnS-UGA · PX260185.1 · 34,533–34,625 bp · −
trnfM-CAU · PX260185.1 · 35,574–35,647 bp · −
rps14 · PX260185.1 · 35,797–36,099 bp · −
psaB · PX260185.1 · 36,232–38,436 bp · −
psaA · PX260185.1 · 38,462–40,714 bp · −
ycf3 · PX260185.1 · 41,445–43,382 bp · −
rps4 · PX260185.1 · 43,910–44,515 bp · −
trnT-UGU · PX260185.1 · 44,929–45,001 bp · −
ndhJ · PX260185.1 · 47,174–47,668 bp · −
ndhK · PX260185.1 · 47,751–48,428 bp · −
ndhC · PX260185.1 · 48,482–48,844 bp · −
trnV-UAC · PX260185.1 · 49,783–50,431 bp · −
atpE · PX260185.1 · 50,906–51,307 bp · −
atpB · PX260185.1 · 51,328–52,800 bp · −
psbJ · PX260185.1 · 61,924–62,046 bp · −
psbL · PX260185.1 · 62,184–62,300 bp · −
psbF · PX260185.1 · 62,324–62,443 bp · −
psbE · PX260185.1 · 62,458–62,709 bp · −
trnW-CCA · PX260185.1 · 64,132–64,205 bp · −
trnP-UGG · PX260185.1 · 64,375–64,448 bp · −
rpl20 · PX260185.1 · 66,204–66,590 bp · −
rps12 · PX260185.1 · 67,335–67,448 bp · −
rps12 · PX260185.1 · 94,720–95,513 bp · −
clpP · PX260185.1 · 67,574–69,450 bp · −
psbN · PX260185.1 · 71,788–71,919 bp · −
rpoA · PX260185.1 · 75,320–76,348 bp · −
rps11 · PX260185.1 · 76,420–76,851 bp · −
rpl36 · PX260185.1 · 76,939–77,052 bp · −
infA · PX260185.1 · 77,148–77,381 bp · −
rps8 · PX260185.1 · 77,504–77,917 bp · −
rpl14 · PX260185.1 · 78,085–78,453 bp · −
rpl16 · PX260185.1 · 78,580–79,885 bp · −
rps3 · PX260185.1 · 80,038–80,700 bp · −
rpl22 · PX260185.1 · 80,685–81,149 bp · −
rps19 · PX260185.1 · 81,213–81,491 bp · −
rpl2 · PX260185.1 · 81,543–83,034 bp · −
rpl23 · PX260185.1 · 83,053–83,334 bp · −
trnI-CAU · PX260185.1 · 83,508–83,581 bp · −
trnL-CAA · PX260185.1 · 91,088–91,168 bp · −
ndhB · PX260185.1 · 91,713–93,924 bp · −
rps7 · PX260185.1 · 94,199–94,666 bp · −
trnN-GUU · PX260185.1 · 105,597–105,668 bp · −
ccsA · PX260185.1 · 119,919–120,890 bp · −
trnL-UAG · PX260185.1 · 120,970–121,049 bp · −
rpl32 · PX260185.1 · 121,744–121,920 bp · −
trnR-ACG · PX260185.1 · 126,606–126,679 bp · −
rrn5 · PX260185.1 · 126,914–127,034 bp · −
rrn4.5 · PX260185.1 · 127,290–127,392 bp · −
rrn23 · PX260185.1 · 127,491–130,300 bp · −
trnA-UGC · PX260185.1 · 130,493–131,371 bp · −
trnI-GAU · PX260185.1 · 131,436–132,445 bp · −
rrn16 · PX260185.1 · 132,735–134,225 bp · −
trnV-GAC · PX260185.1 · 134,453–134,524 bp · −
ycf15 · PX260185.1 · 140,814–141,077 bp · −
ycf2 · PX260185.1 · 141,105–147,971 bp · −
psbK · PX260185.1 · 7,293–7,478 bp · +
psbI · PX260185.1 · 7,858–7,968 bp · +
trnG-UCC · PX260185.1 · 8,860–9,618 bp · +
trnR-UCU · PX260185.1 · 9,802–9,876 bp · +
trnC-GCA · PX260185.1 · 27,635–27,710 bp · +
petN · PX260185.1 · 28,551–28,640 bp · +
trnT-GGU · PX260185.1 · 30,725–30,795 bp · +
psbD · PX260185.1 · 31,872–32,933 bp · +
psbC · PX260185.1 · 32,881–34,302 bp · +
psbZ · PX260185.1 · 34,952–35,140 bp · +
trnG-GCC · PX260185.1 · 35,364–35,434 bp · +
trnS-GGA · PX260185.1 · 43,668–43,754 bp · +
trnL-UAA · PX260185.1 · 45,672–46,250 bp · +
trnF-GAA · PX260185.1 · 46,431–46,503 bp · +
trnM-CAU · PX260185.1 · 50,620–50,692 bp · +
rbcL · PX260185.1 · 53,576–55,042 bp · +
accD · PX260185.1 · 55,728–57,185 bp · +
psaI · PX260185.1 · 57,593–57,703 bp · +
ycf4 · PX260185.1 · 58,142–58,696 bp · +
cemA · PX260185.1 · 59,009–59,698 bp · +
petA · PX260185.1 · 59,915–60,877 bp · +
petL · PX260185.1 · 63,623–63,718 bp · +
petG · PX260185.1 · 63,893–64,006 bp · +
psaJ · PX260185.1 · 64,723–64,857 bp · +
rpl33 · PX260185.1 · 65,336–65,536 bp · +
rps18 · PX260185.1 · 65,649–65,987 bp · +
rps12 · PX260185.1 · 136,128–136,921 bp · +
psbB · PX260185.1 · 69,893–71,419 bp · +
psbT · PX260185.1 · 71,613–71,714 bp · +
psbH · PX260185.1 · 72,023–72,244 bp · +
petB · PX260185.1 · 72,365–73,746 bp · +
petD · PX260185.1 · 73,941–75,157 bp · +
ycf2 · PX260185.1 · 83,670–90,536 bp · +
trnV-GAC · PX260185.1 · 97,117–97,188 bp · +
rrn16 · PX260185.1 · 97,416–98,906 bp · +
trnI-GAU · PX260185.1 · 99,196–100,205 bp · +
trnA-UGC · PX260185.1 · 100,270–101,148 bp · +
rrn23 · PX260185.1 · 101,341–104,150 bp · +
rrn4.5 · PX260185.1 · 104,249–104,351 bp · +
rrn5 · PX260185.1 · 104,607–104,727 bp · +
trnR-ACG · PX260185.1 · 104,962–105,035 bp · +
ycf1 · PX260185.1 · 105,994–111,522 bp · +
rps15 · PX260185.1 · 111,915–112,187 bp · +
ndhH · PX260185.1 · 112,288–113,469 bp · +
ndhA · PX260185.1 · 113,471–115,625 bp · +
ndhI · PX260185.1 · 115,705–116,211 bp · +
ndhG · PX260185.1 · 116,570–117,100 bp · +
ndhE · PX260185.1 · 117,313–117,615 bp · +
psaC · PX260185.1 · 117,867–118,112 bp · +
ndhD · PX260185.1 · 118,216–119,736 bp · +
ndhF · PX260185.1 · 122,355–124,583 bp · +
trnN-GUU · PX260185.1 · 125,973–126,044 bp · +
rps7 · PX260185.1 · 136,975–137,442 bp · +
ndhB · PX260185.1 · 137,717–139,928 bp · +
trnL-CAA · PX260185.1 · 140,473–140,553 bp · +
trnI-CAU · PX260185.1 · 148,060–148,133 bp · +
rpl23 · PX260185.1 · 148,307–148,588 bp · +
rpl2 · PX260185.1 · 148,607–150,098 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Stachys persica
ANNOTATED PLASTOME
PX260185.1
150,191 bp · 131 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37548 75096 112643 150191 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rps15 ndhH ndhA ndhI ndhG ndhE psaC ndhD ndhF trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ccsA trnL-UAG rpl32 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
132 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 76 75 Locate
psbA gene − 509 1567 1059 Locate
trnK-UUU gene − 1800 4381 2582 Locate
matK gene − 2099 3628 1530 Locate
rps16 gene − 5061 6186 1126 Locate
trnQ-UUG gene − 6887 6959 73 Locate
psbK gene + 7293 7478 186 Locate
psbI gene + 7858 7968 111 Locate
trnS-GCU gene − 8090 8177 88 Locate
trnG-UCC gene + 8860 9618 759 Locate
trnR-UCU gene + 9802 9876 75 Locate
atpA gene − 9973 11496 1524 Locate
atpF gene − 11602 12809 1208 Locate
atpH gene − 13181 13426 246 Locate
atpI gene − 14236 14979 744 Locate
rps2 gene − 15204 15914 711 Locate
rpoC2 gene − 16258 20334 4077 Locate
rpoC1 gene − 20489 23298 2810 Locate
rpoB gene − 23325 26537 3213 Locate
trnC-GCA gene + 27635 27710 76 Locate
petN gene + 28551 28640 90 Locate
psbM gene − 29125 29229 105 Locate
trnD-GUC gene − 29752 29825 74 Locate
trnY-GUA gene − 29941 30024 84 Locate
trnE-UUC gene − 30076 30148 73 Locate
trnT-GGU gene + 30725 30795 71 Locate
psbD gene + 31872 32933 1062 Locate
psbC gene + 32881 34302 1422 Locate
trnS-UGA gene − 34533 34625 93 Locate
psbZ gene + 34952 35140 189 Locate
trnG-GCC gene + 35364 35434 71 Locate
trnfM-CAU gene − 35574 35647 74 Locate
rps14 gene − 35797 36099 303 Locate
psaB gene − 36232 38436 2205 Locate
psaA gene − 38462 40714 2253 Locate
ycf3 gene − 41445 43382 1938 Locate
trnS-GGA gene + 43668 43754 87 Locate
rps4 gene − 43910 44515 606 Locate
trnT-UGU gene − 44929 45001 73 Locate
trnL-UAA gene + 45672 46250 579 Locate
trnF-GAA gene + 46431 46503 73 Locate
ndhJ gene − 47174 47668 495 Locate
ndhK gene − 47751 48428 678 Locate
ndhC gene − 48482 48844 363 Locate
trnV-UAC gene − 49783 50431 649 Locate
trnM-CAU gene + 50620 50692 73 Locate
atpE gene − 50906 51307 402 Locate
atpB gene − 51328 52800 1473 Locate
rbcL gene + 53576 55042 1467 Locate
accD gene + 55728 57185 1458 Locate
psaI gene + 57593 57703 111 Locate
ycf4 gene + 58142 58696 555 Locate
cemA gene + 59009 59698 690 Locate
petA gene + 59915 60877 963 Locate
psbJ gene − 61924 62046 123 Locate
psbL gene − 62184 62300 117 Locate
psbF gene − 62324 62443 120 Locate
psbE gene − 62458 62709 252 Locate
petL gene + 63623 63718 96 Locate
petG gene + 63893 64006 114 Locate
trnW-CCA gene − 64132 64205 74 Locate
trnP-UGG gene − 64375 64448 74 Locate
psaJ gene + 64723 64857 135 Locate
rpl33 gene + 65336 65536 201 Locate
rps18 gene + 65649 65987 339 Locate
rpl20 gene − 66204 66590 387 Locate
rps12 gene − 67335 67448 114 Locate
clpP gene − 67574 69450 1877 Locate
psbB gene + 69893 71419 1527 Locate
psbT gene + 71613 71714 102 Locate
psbN gene − 71788 71919 132 Locate
psbH gene + 72023 72244 222 Locate
petB gene + 72365 73746 1382 Locate
petD gene + 73941 75157 1217 Locate
rpoA gene − 75320 76348 1029 Locate
rps11 gene − 76420 76851 432 Locate
rpl36 gene − 76939 77052 114 Locate
infA gene − 77148 77381 234 Locate
rps8 gene − 77504 77917 414 Locate
rpl14 gene − 78085 78453 369 Locate
rpl16 gene − 78580 79885 1306 Locate
rps3 gene − 80038 80700 663 Locate
rpl22 gene − 80685 81149 465 Locate
rps19 gene − 81213 81491 279 Locate
rpl2 gene − 81543 83034 1492 Locate
rpl23 gene − 83053 83334 282 Locate
trnI-CAU gene − 83508 83581 74 Locate
ycf2 gene + 83670 90536 6867 Locate
trnL-CAA gene − 91088 91168 81 Locate
ndhB gene − 91713 93924 2212 Locate
rps7 gene − 94199 94666 468 Locate
rps12 gene − 94720 95513 794 Locate
trnV-GAC gene + 97117 97188 72 Locate
rrn16 gene + 97416 98906 1491 Locate
trnI-GAU gene + 99196 100205 1010 Locate
trnA-UGC gene + 100270 101148 879 Locate
rrn23 gene + 101341 104150 2810 Locate
rrn4.5 gene + 104249 104351 103 Locate
rrn5 gene + 104607 104727 121 Locate
trnR-ACG gene + 104962 105035 74 Locate
trnN-GUU gene − 105597 105668 72 Locate
ycf1 gene + 105994 111522 5529 Locate
rps15 gene + 111915 112187 273 Locate
ndhH gene + 112288 113469 1182 Locate
ndhA gene + 113471 115625 2155 Locate
ndhI gene + 115705 116211 507 Locate
ndhG gene + 116570 117100 531 Locate
ndhE gene + 117313 117615 303 Locate
psaC gene + 117867 118112 246 Locate
ndhD gene + 118216 119736 1521 Locate
ccsA gene − 119919 120890 972 Locate
trnL-UAG gene − 120970 121049 80 Locate
rpl32 gene − 121744 121920 177 Locate
ndhF gene + 122355 124583 2229 Locate
trnN-GUU gene + 125973 126044 72 Locate
trnR-ACG gene − 126606 126679 74 Locate
rrn5 gene − 126914 127034 121 Locate
rrn4.5 gene − 127290 127392 103 Locate
rrn23 gene − 127491 130300 2810 Locate
trnA-UGC gene − 130493 131371 879 Locate
trnI-GAU gene − 131436 132445 1010 Locate
rrn16 gene − 132735 134225 1491 Locate
trnV-GAC gene − 134453 134524 72 Locate
rps12 gene + 136128 136921 794 Locate
rps7 gene + 136975 137442 468 Locate
ndhB gene + 137717 139928 2212 Locate
trnL-CAA gene + 140473 140553 81 Locate
ycf15 gene − 140814 141077 264 Locate
ycf2 gene − 141105 147971 6867 Locate
trnI-CAU gene + 148060 148133 74 Locate
rpl23 gene + 148307 148588 282 Locate
rpl2 gene + 148607 150098 1492 Locate
Status Available
Accession PX260185.1
Length 150,191 bp
GC content 38.6%
Annotated genes 131
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 13 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources