Coordinate-aware organelle record

Stachys sylvatica chloroplast genome

Available NC_029824.1 150,167 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	0	75	75
psbA	gene	photosystem-ii	−	395	1454	1059
trnK-UUU	gene	translation-rna	−	1688	4259	2571
matK	gene	other	−	1987	3517	1530
rps16	gene	ribosomal-protein	−	4908	6049	1141
trnQ-UUG	gene	translation-rna	−	6874	6946	72
psbK	gene	photosystem-ii	+	7282	7468	186
psbI	gene	photosystem-ii	+	7843	7954	111
trnS-GCU	gene	translation-rna	−	8075	8163	88
trnG-UCC	gene	translation-rna	+	8841	9601	760
trnR-UCU	gene	translation-rna	+	9761	9833	72
atpA	gene	atp-synthase	−	9929	11453	1524
atpF	gene	atp-synthase	−	11540	12753	1213
atpH	gene	atp-synthase	−	13118	13364	246
atpI	gene	atp-synthase	−	14319	15063	744
rps2	gene	ribosomal-protein	−	15293	16004	711
rpoC2	gene	rna-polymerase	−	16341	20424	4083
rpoC1	gene	rna-polymerase	−	20578	23415	2837
rpoB	gene	rna-polymerase	−	23441	26654	3213
trnC-GCA	gene	translation-rna	+	27754	27825	71
petN	gene	cytochrome	+	28659	28749	90
psbM	gene	photosystem-ii	−	29251	29356	105
trnD-GUC	gene	translation-rna	−	29874	29948	74
trnY-GUA	gene	translation-rna	−	30063	30147	84
trnE-UUC	gene	translation-rna	−	30206	30279	73
trnT-GGU	gene	translation-rna	+	30849	30921	72
psbD	gene	photosystem-ii	+	31996	33058	1062
psbC	gene	photosystem-ii	+	33005	34427	1422
trnS-UGA	gene	translation-rna	−	34655	34748	93
psbZ	gene	photosystem-ii	+	35075	35264	189
trnG-GCC	gene	translation-rna	+	35489	35560	71
trnfM-CAU	gene	translation-rna	−	35708	35782	74
rps14	gene	ribosomal-protein	−	35931	36234	303
psaB	gene	photosystem-i	−	36369	38574	2205
psaA	gene	photosystem-i	−	38599	40852	2253
ycf3	gene	other	−	41595	43537	1942
trnS-GGA	gene	translation-rna	+	43852	43939	87
rps4	gene	ribosomal-protein	−	44094	44700	606
trnT-UGU	gene	translation-rna	−	45085	45158	73
trnL-UAA	gene	translation-rna	+	45842	46416	574
trnF-GAA	gene	translation-rna	+	46711	46784	73
ndhJ	gene	nad-dehydrogenase	−	47449	47926	477
ndhK	gene	nad-dehydrogenase	−	48026	48704	678
ndhC	gene	nad-dehydrogenase	−	48757	49120	363
trnV-UAC	gene	translation-rna	−	50057	50710	653
trnM-CAU	gene	translation-rna	+	50898	50971	73
atpE	gene	atp-synthase	−	51184	51586	402
atpB	gene	atp-synthase	−	51582	53079	1497
rbcL	gene	other	+	53880	55326	1446
accD	gene	other	+	56026	57493	1467
psaI	gene	photosystem-i	+	57890	58001	111
ycf4	gene	other	+	58435	58990	555
cemA	gene	other	+	59296	59986	690
petA	gene	cytochrome	+	60224	61187	963
psbJ	gene	photosystem-ii	−	62230	62353	123
psbL	gene	photosystem-ii	−	62490	62607	117
psbF	gene	photosystem-ii	−	62630	62750	120
psbE	gene	photosystem-ii	−	62764	63016	252
petL	gene	cytochrome	+	63900	63996	96
petG	gene	cytochrome	+	64170	64284	114
trnW-CCA	gene	translation-rna	−	64409	64483	74
trnP-UGG	gene	translation-rna	−	64652	64726	74
psaJ	gene	photosystem-i	+	64998	65133	135
rpl33	gene	ribosomal-protein	+	65611	65812	201
rps18	gene	ribosomal-protein	+	65957	66263	306
rpl20	gene	ribosomal-protein	−	66479	66866	387
rps12	gene	ribosomal-protein	−	67605	95727	28122
rps12	gene	ribosomal-protein	+	67605	136895	69290
clpP	gene	other	−	67844	69706	1862
psbB	gene	photosystem-ii	+	70143	71670	1527
psbT	gene	photosystem-ii	+	71854	71965	111
psbN	gene	photosystem-ii	−	72038	72170	132
psbH	gene	photosystem-ii	+	72273	72495	222
petB	gene	cytochrome	+	72619	73992	1373
petD	gene	cytochrome	+	74186	75396	1210
rpoA	gene	rna-polymerase	−	75558	76572	1014
rps11	gene	ribosomal-protein	−	76643	77060	417
rpl36	gene	ribosomal-protein	−	77162	77276	114
infA	gene	other	−	77371	77605	234
rps8	gene	ribosomal-protein	−	77728	78142	414
rpl14	gene	ribosomal-protein	−	78309	78678	369
rpl16	gene	ribosomal-protein	−	78804	80097	1293
rps3	gene	ribosomal-protein	−	80250	80913	663
rpl22	gene	ribosomal-protein	−	80897	81362	465
rps19	gene	ribosomal-protein	−	81425	81704	279
rpl2	gene	ribosomal-protein	−	81755	83247	1492
rpl23	gene	ribosomal-protein	−	83265	83547	282
trnI-CAU	gene	translation-rna	−	83720	83794	74
ycf2	gene	other	+	83882	90749	6867
ycf15	gene	other	+	90791	91040	249
trnL-CAA	gene	translation-rna	−	91300	91381	81
ndhB	gene	nad-dehydrogenase	−	91926	94138	2212
rps7	gene	ribosomal-protein	−	94412	94880	468
trnV-GAC	gene	translation-rna	+	97214	97286	72
A4329_pgr008	gene	other	+	97513	99006	1493
trnI-GAU	gene	translation-rna	+	99297	100306	1009
trnA-UGC	gene	translation-rna	+	100370	101249	879
A4329_pgr007	gene	other	+	101440	104251	2811
A4329_pgr006	gene	other	+	104349	104452	103
A4329_pgr005	gene	other	+	104707	104828	121
trnR-ACG	gene	translation-rna	+	105062	105136	74
trnN-GUU	gene	translation-rna	−	105703	105775	72
ycf1	gene	other	+	106100	107159	1059
ndhF	gene	nad-dehydrogenase	−	107164	109393	2229
rpl32	gene	ribosomal-protein	+	109886	110063	177
trnL-UAG	gene	translation-rna	+	110795	110875	80
ccsA	gene	other	+	110962	111934	972
ndhD	gene	nad-dehydrogenase	−	112115	113636	1521
psaC	gene	photosystem-i	−	113739	113985	246
ndhE	gene	nad-dehydrogenase	−	114236	114542	306
ndhG	gene	nad-dehydrogenase	−	114751	115282	531
ndhI	gene	nad-dehydrogenase	−	115657	116164	507
ndhA	gene	nad-dehydrogenase	−	116243	118355	2112
ndhH	gene	nad-dehydrogenase	−	118356	119538	1182
rps15	gene	ribosomal-protein	−	119638	119911	273
ycf1	gene	other	−	120300	125844	5544
trnN-GUU	gene	translation-rna	+	126169	126241	72
trnR-ACG	gene	translation-rna	−	126790	126864	74
A4329_pgr004	gene	other	−	127058	127179	121
A4329_pgr003	gene	other	−	127434	127537	103
A4329_pgr002	gene	other	−	127635	130446	2811
trnA-UGC	gene	translation-rna	−	130586	131455	869
trnI-GAU	gene	translation-rna	−	131519	132528	1009
A4329_pgr001	gene	other	−	132821	134312	1491
trnV-GAC	gene	translation-rna	−	134539	134611	72
rps7	gene	ribosomal-protein	+	136948	137416	468
ndhB	gene	nad-dehydrogenase	+	137690	139902	2212
trnL-CAA	gene	translation-rna	+	140447	140528	81
ycf15	gene	other	−	140788	141037	249
ycf2	gene	other	−	141079	147946	6867
trnI-CAU	gene	translation-rna	+	148034	148108	74
rpl23	gene	ribosomal-protein	+	148281	148563	282
rpl2	gene	ribosomal-protein	+	148581	150073	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_029824.1DNA · accDNC_029824DNA · atpBNC_029824DNA · matKNC_029824DNA · ndhFNC_029824DNA · psbANC_029824DNA · rbcLNC_029824DNA · rps12NC_029824DNA · ycf1NC_029824