Coordinate-aware organelle record

Tectona grandis chloroplast genome

Available NC_020098.1 153,953 bp 134 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

134 features

Gene	Type	Group	Strand	Start	End	Length
tRNA-H (GUG)	gene	translation-rna	−	3	78	75
psbA	gene	photosystem-ii	−	446	1505	1059
trnK (UUU)	gene	translation-rna	−	1746	4331	2585
matK	gene	other	−	2050	3595	1545
rps16	gene	ribosomal-protein	−	5244	6363	1119
trnQ (UUG)	gene	translation-rna	−	7535	7607	72
psbK	gene	photosystem-ii	+	7925	8120	195
psbI	gene	photosystem-ii	+	8505	8616	111
trnS (GCU)	gene	translation-rna	−	8734	8822	88
trnG (GCC)	gene	translation-rna	+	9538	10285	747
trnR (UCU)	gene	translation-rna	+	10466	10538	72
atpA	gene	atp-synthase	−	10657	12181	1524
atpF	gene	atp-synthase	−	12254	13510	1256
atpH	gene	atp-synthase	−	13871	14117	246
atpI	gene	atp-synthase	−	15147	15891	744
rps2	gene	ribosomal-protein	−	16115	16826	711
rpoC	gene	rna-polymerase	−	17034	21222	4188
rpoC1	gene	rna-polymerase	−	21376	24252	2876
rpoB	gene	rna-polymerase	−	24278	27491	3213
trnC (GCA)	gene	translation-rna	+	28642	28723	81
petN	gene	cytochrome	+	29606	29696	90
psbM	gene	photosystem-ii	−	30676	30781	105
trnD (GUC)	gene	translation-rna	−	31298	31372	74
trnY (GUA)	gene	translation-rna	−	31494	31578	84
trnE (UUC)	gene	translation-rna	−	31628	31701	73
trnT (GGU)	gene	translation-rna	+	32258	32330	72
psbD	gene	photosystem-ii	+	33733	34795	1062
psbC	gene	photosystem-ii	+	34742	36164	1422
trnS (UGA)	gene	translation-rna	−	36404	36497	93
psbZ	gene	photosystem-ii	+	36832	37021	189
trnG (GCC)	gene	translation-rna	+	37298	37369	71
tRNA-fM (CAU)	gene	translation-rna	−	37552	37626	74
rps14	gene	ribosomal-protein	−	37775	38078	303
psaB	gene	photosystem-i	−	38199	40404	2205
psaA	gene	photosystem-i	−	40429	42682	2253
ycf3	gene	other	−	43439	45420	1981
trnS (GGA)	gene	translation-rna	+	46259	46348	89
rps4	gene	ribosomal-protein	−	46644	47250	606
trnT (UGU)	gene	translation-rna	−	47592	47665	73
trnL (UAA)	gene	translation-rna	+	48360	48927	567
trnF (GAA)	gene	translation-rna	+	49231	49304	73
ndhJ	gene	nad-dehydrogenase	−	49966	50443	477
ndhK	gene	nad-dehydrogenase	−	50548	51226	678
ndhC	gene	nad-dehydrogenase	−	51278	51641	363
trnV (UAC)	gene	translation-rna	−	52634	53288	654
trnM (CAU)	gene	translation-rna	+	53469	53541	72
atpE	gene	atp-synthase	−	53777	54179	402
atpB	gene	atp-synthase	−	54175	55672	1497
rbcL	gene	other	+	56435	57890	1455
accD	gene	other	+	58603	60085	1482
psaI	gene	photosystem-i	+	60800	60911	111
ycf4	gene	other	+	61363	61918	555
cemA	gene	other	+	62576	63266	690
petA	gene	cytochrome	+	63471	64434	963
psbJ	gene	photosystem-ii	−	65460	65583	123
psbL	gene	photosystem-ii	−	65716	65833	117
psbF	gene	photosystem-ii	−	65862	65982	120
psbE	gene	photosystem-ii	−	65996	66248	252
petL	gene	cytochrome	+	67167	67263	96
petG	gene	cytochrome	+	67438	67552	114
trnW (CCA)	gene	translation-rna	−	67679	67753	74
trnP (UGG)	gene	translation-rna	−	67924	67998	74
psaJ	gene	photosystem-i	+	68277	68412	135
rpl33	gene	ribosomal-protein	+	68894	69095	201
rps18	gene	ribosomal-protein	+	69265	69571	306
rpl20	gene	ribosomal-protein	−	69805	70192	387
rpl20	gene	ribosomal-protein	−	71028	71142	114
rps12	gene	ribosomal-protein	−	71028	99195	28167
clpP	gene	other	−	71303	73277	1974
psbB	gene	photosystem-ii	+	73749	75276	1527
psbT	gene	photosystem-ii	+	75460	75568	108
psbN	gene	photosystem-ii	−	75637	75769	132
psbH	gene	photosystem-ii	+	75874	76096	222
petB	gene	cytochrome	+	76210	77608	1398
petD	gene	cytochrome	+	78502	79027	525
rpoA	gene	rna-polymerase	−	79214	80228	1014
rps11	gene	ribosomal-protein	−	80299	80716	417
rpl36	gene	ribosomal-protein	−	80818	80932	114
infA	gene	other	−	81027	81261	234
rps8	gene	ribosomal-protein	−	81382	81787	405
rpl14	gene	ribosomal-protein	−	81980	82349	369
rpl16	gene	ribosomal-protein	−	82477	83768	1291
rps3	gene	ribosomal-protein	−	83909	84572	663
rpl22	gene	ribosomal-protein	−	84556	85021	465
rps19	gene	ribosomal-protein	−	85079	85358	279
rpl2	gene	ribosomal-protein	−	85411	86903	1492
rpl23	gene	ribosomal-protein	−	86921	87203	282
trnI (CAU)	gene	translation-rna	−	87368	87442	74
ycf2	gene	other	+	87530	94394	6864
ycf15	gene	other	+	94535	94733	198
trnL (CAA)	gene	translation-rna	−	94764	94845	81
ndhB	gene	nad-dehydrogenase	−	95392	97604	2212
rps7	gene	ribosomal-protein	−	97880	98348	468
trnV (GAC)	gene	translation-rna	+	100808	100880	72
rrn16	gene	ribosomal-rna	+	101106	102597	1491
trnI (GAU)	gene	translation-rna	+	102895	103915	1020
trnA (UGC)	gene	translation-rna	+	103979	104863	884
rrn23	gene	ribosomal-rna	+	105031	107842	2811
rrn4.5	gene	ribosomal-rna	+	107940	108043	103
rrn5	gene	ribosomal-rna	+	108298	108419	121
trnR (ACG)	gene	translation-rna	+	108655	108729	74
trnN	gene	translation-rna	−	109282	109354	72
ycf1	gene	other	+	109692	110772	1080
ndhF	gene	nad-dehydrogenase	−	110765	112997	2232
rpl32	gene	ribosomal-protein	+	113535	113712	177
trnL (UAG)	gene	translation-rna	+	114443	114523	80
ccsA	gene	other	+	114611	115583	972
ndhD	gene	nad-dehydrogenase	−	115868	117371	1503
psaC	gene	photosystem-i	−	117489	117735	246
ndhE	gene	nad-dehydrogenase	−	117990	118296	306
ndhG	gene	nad-dehydrogenase	−	118532	119063	531
ndhI	gene	nad-dehydrogenase	−	119409	119910	501
ndhA	gene	nad-dehydrogenase	−	119990	122050	2060
ndhH	gene	nad-dehydrogenase	−	122051	123233	1182
rps15	gene	ribosomal-protein	−	123328	123601	273
ycf1	gene	other	−	124002	129699	5697
trnN (GUU)	gene	translation-rna	+	129917	129989	72
trnR (ACG)	gene	translation-rna	−	130542	130616	74
rrn5	gene	ribosomal-rna	−	130852	130973	121
rrn4.5	gene	ribosomal-rna	−	131228	131331	103
rrn23	gene	ribosomal-rna	−	131429	134240	2811
trnA (UGC)	gene	translation-rna	−	134408	135292	884
trnI (GAU)	gene	translation-rna	−	135356	136376	1020
rrn16	gene	ribosomal-rna	−	136674	138165	1491
trnV (GAC)	gene	translation-rna	−	138391	138463	72
rps12	gene	ribosomal-protein	+	140076	140319	243
rps7	gene	ribosomal-protein	+	140923	141391	468
ndhB	gene	nad-dehydrogenase	+	141667	143879	2212
trnL (CAA)	gene	translation-rna	+	144426	144507	81
ycf15	gene	other	−	144538	144787	249
ycf2	gene	other	−	144877	151741	6864
trnI (CAU)	gene	translation-rna	+	151829	151903	74
rpl23	gene	ribosomal-protein	+	152068	152350	282
rpl2	gene	ribosomal-protein	+	152368	153860	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_020098.1DNA · accDNC_020098DNA · atpBNC_020098DNA · matKNC_020098DNA · ndhFNC_020098DNA · psbANC_020098DNA · rbcLNC_020098DNA · rps12NC_020098DNA · ycf1NC_020098