Teucrium chamaedrys chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
psbJ · PV340612.1 · 6,066–6,188 bp · −
psbL · PV340612.1 · 6,330–6,446 bp · −
psbF · PV340612.1 · 6,470–6,589 bp · −
psbE · PV340612.1 · 6,604–6,855 bp · −
trnW-CCA · PV340612.1 · 8,276–8,349 bp · −
trnP-UGG · PV340612.1 · 8,515–8,588 bp · −
rpl20 · PV340612.1 · 10,399–10,785 bp · −
rps12 · PV340612.1 · 11,634–11,747 bp · −
rps12 · PV340612.1 · 37,656–38,449 bp · −
clpP · PV340612.1 · 11,906–13,846 bp · −
psbN · PV340612.1 · 16,178–16,309 bp · −
rpoA · PV340612.1 · 19,694–20,713 bp · −
rps11 · PV340612.1 · 20,789–21,205 bp · −
rpl36 · PV340612.1 · 21,307–21,420 bp · −
infA · PV340612.1 · 21,530–21,763 bp · −
rps8 · PV340612.1 · 21,888–22,292 bp · −
rpl14 · PV340612.1 · 22,465–22,833 bp · −
rpl16 · PV340612.1 · 22,960–24,227 bp · −
rps3 · PV340612.1 · 24,377–25,021 bp · −
rpl22 · PV340612.1 · 25,006–25,467 bp · −
rps19 · PV340612.1 · 25,527–25,805 bp · −
rpl2 · PV340612.1 · 25,859–27,352 bp · −
rpl23 · PV340612.1 · 27,371–27,652 bp · −
trnI-CAU · PV340612.1 · 27,818–27,891 bp · −
trnL-CAA · PV340612.1 · 34,030–34,110 bp · −
ndhB · PV340612.1 · 34,660–36,871 bp · −
rps7 · PV340612.1 · 37,135–37,602 bp · −
trnN-GUU · PV340612.1 · 48,567–48,639 bp · −
ndhF · PV340612.1 · 50,001–52,217 bp · −
ndhD · PV340612.1 · 55,619–55,987 bp · −
psaC · PV340612.1 · 56,307–56,552 bp · −
ndhE · PV340612.1 · 56,803–57,108 bp · −
ndhG · PV340612.1 · 57,279–57,809 bp · −
ndhI · PV340612.1 · 58,146–58,652 bp · −
ndhA · PV340612.1 · 58,733–60,906 bp · −
ndhH · PV340612.1 · 60,908–62,089 bp · −
rps15 · PV340612.1 · 62,186–62,458 bp · −
ycf1 · PV340612.1 · 62,849–68,059 bp · −
trnR-ACG · PV340612.1 · 69,042–69,115 bp · −
rrn5 · PV340612.1 · 69,360–69,480 bp · −
rrn4.5 · PV340612.1 · 69,741–69,843 bp · −
rrn23 · PV340612.1 · 69,942–72,751 bp · −
trnA-UGC · PV340612.1 · 72,922–73,801 bp · −
trnI-GAU · PV340612.1 · 73,866–74,887 bp · −
rrn16 · PV340612.1 · 75,186–76,672 bp · −
trnV-GAC · PV340612.1 · 76,903–76,974 bp · −
ycf15 · PV340612.1 · 83,273–83,521 bp · −
ycf2 · PV340612.1 · 83,621–88,969 bp · −
trnH-GUG · PV340612.1 · 92,417–92,491 bp · −
psbA · PV340612.1 · 92,894–93,952 bp · −
trnK-UUU · PV340612.1 · 94,253–96,791 bp · −
matK · PV340612.1 · 94,511–96,205 bp · −
rps16 · PV340612.1 · 97,684–98,656 bp · −
trnQ-UUG · PV340612.1 · 99,480–99,551 bp · −
trnS-GCU · PV340612.1 · 100,691–100,778 bp · −
atpA · PV340612.1 · 102,621–104,144 bp · −
atpF · PV340612.1 · 104,711–105,521 bp · −
atpH · PV340612.1 · 105,876–106,121 bp · −
atpI · PV340612.1 · 107,126–107,869 bp · −
rps2 · PV340612.1 · 108,141–108,800 bp · −
rpoC2 · PV340612.1 · 109,111–113,229 bp · −
rpoC1 · PV340612.1 · 113,397–116,239 bp · −
rpoB · PV340612.1 · 119,402–119,479 bp · −
psbM · PV340612.1 · 122,447–122,551 bp · −
trnD-GUC · PV340612.1 · 123,072–123,145 bp · −
trnY-GUA · PV340612.1 · 123,252–123,335 bp · −
trnE-UUC · PV340612.1 · 123,395–123,467 bp · −
trnS-UGA · PV340612.1 · 128,143–128,234 bp · −
trnfM-CAU · PV340612.1 · 129,270–129,343 bp · −
rps14 · PV340612.1 · 129,488–129,790 bp · −
psaB · PV340612.1 · 129,912–132,116 bp · −
ycf3 · PV340612.1 · 135,106–137,058 bp · −
rps4 · PV340612.1 · 138,047–138,646 bp · −
trnT-UGU · PV340612.1 · 139,013–139,085 bp · −
ndhJ · PV340612.1 · 141,396–141,872 bp · −
ndhK · PV340612.1 · 141,978–142,655 bp · −
ndhC · PV340612.1 · 142,709–143,071 bp · −
trnV-UAC · PV340612.1 · 143,977–144,635 bp · −
atpE · PV340612.1 · 145,089–145,490 bp · −
atpB · PV340612.1 · 145,487–146,983 bp · −
accD · PV340612.1 · 52–1,140 bp · +
psaI · PV340612.1 · 1,605–1,715 bp · +
ycf4 · PV340612.1 · 2,140–2,694 bp · +
cemA · PV340612.1 · 3,364–4,053 bp · +
petA · PV340612.1 · 4,258–5,220 bp · +
petL · PV340612.1 · 7,770–7,865 bp · +
petG · PV340612.1 · 8,039–8,152 bp · +
psaJ · PV340612.1 · 8,872–9,006 bp · +
rpl33 · PV340612.1 · 9,481–9,681 bp · +
rps18 · PV340612.1 · 9,859–10,164 bp · +
rps12 · PV340612.1 · 78,591–79,384 bp · +
psbB · PV340612.1 · 14,299–15,825 bp · +
psbT · PV340612.1 · 16,003–16,110 bp · +
psbH · PV340612.1 · 16,397–16,627 bp · +
petB · PV340612.1 · 16,748–18,086 bp · +
petD · PV340612.1 · 18,280–19,517 bp · +
ycf2 · PV340612.1 · 28,071–33,419 bp · +
ycf15 · PV340612.1 · 33,519–33,767 bp · +
trnV-GAC · PV340612.1 · 40,066–40,137 bp · +
rrn16 · PV340612.1 · 40,368–41,854 bp · +
trnI-GAU · PV340612.1 · 42,153–43,174 bp · +
trnA-UGC · PV340612.1 · 43,239–44,118 bp · +
rrn23 · PV340612.1 · 44,289–47,098 bp · +
rrn4.5 · PV340612.1 · 47,197–47,299 bp · +
rrn5 · PV340612.1 · 47,560–47,680 bp · +
trnR-ACG · PV340612.1 · 47,925–47,998 bp · +
rpl32 · PV340612.1 · 52,710–52,886 bp · +
trnL-UAG · PV340612.1 · 53,325–53,404 bp · +
ccsA · PV340612.1 · 53,488–54,459 bp · +
trnN-GUU · PV340612.1 · 68,401–68,473 bp · +
rps7 · PV340612.1 · 79,438–79,905 bp · +
ndhB · PV340612.1 · 80,169–82,380 bp · +
trnL-CAA · PV340612.1 · 82,930–83,010 bp · +
trnI-CAU · PV340612.1 · 89,149–89,222 bp · +
rpl23 · PV340612.1 · 89,388–89,669 bp · +
rpl2 · PV340612.1 · 89,688–91,181 bp · +
rps19 · PV340612.1 · 91,235–91,513 bp · +
rpl22 · PV340612.1 · 91,573–92,034 bp · +
psbK · PV340612.1 · 99,880–100,080 bp · +
psbI · PV340612.1 · 100,468–100,578 bp · +
trnR-UCU · PV340612.1 · 102,439–102,510 bp · +
trnC-GCA · PV340612.1 · 120,670–120,750 bp · +
petN · PV340612.1 · 121,386–121,481 bp · +
psbD · PV340612.1 · 125,455–126,516 bp · +
psbC · PV340612.1 · 126,464–127,885 bp · +
psbZ · PV340612.1 · 128,561–128,749 bp · +
trnG-UCC · PV340612.1 · 129,020–129,090 bp · +
trnS-GGA · PV340612.1 · 137,669–137,755 bp · +
trnL-UAA · PV340612.1 · 139,772–140,345 bp · +
trnF-GAA · PV340612.1 · 140,656–140,728 bp · +
trnM-CAU · PV340612.1 · 144,817–144,889 bp · +
rbcL · PV340612.1 · 147,816–149,279 bp · +
0 kb
12 kb
24 kb
36 kb
48 kb
60 kb
72 kb
84 kb
96 kb
108 kb
120 kb
132 kb
144 kb
Teucrium chamaedrys
ANNOTATED PLASTOME
PV340612.1
149,923 bp · 131 genes
Gene function
Other
Photosystem I
Cytochrome
Photosystem II
Transfer RNA
Ribosomal protein
RNA polymerase
NADH dehydrogenase
Ribosomal RNA
ATP synthase
0 37481 74962 112442 149923 bp
Forward strand 5′ → 3′
accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19 rpl22 psbK psbI trnR-UCU trnC-GCA petN psbD psbC psbZ trnG-UCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL
psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2 trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
132 local segments
Gene Type Group Strand Start End Length
accD gene + 52 1140 1089 Locate
psaI gene + 1605 1715 111 Locate
ycf4 gene + 2140 2694 555 Locate
cemA gene + 3364 4053 690 Locate
petA gene + 4258 5220 963 Locate
psbJ gene − 6066 6188 123 Locate
psbL gene − 6330 6446 117 Locate
psbF gene − 6470 6589 120 Locate
psbE gene − 6604 6855 252 Locate
petL gene + 7770 7865 96 Locate
petG gene + 8039 8152 114 Locate
trnW-CCA gene − 8276 8349 74 Locate
trnP-UGG gene − 8515 8588 74 Locate
psaJ gene + 8872 9006 135 Locate
rpl33 gene + 9481 9681 201 Locate
rps18 gene + 9859 10164 306 Locate
rpl20 gene − 10399 10785 387 Locate
rps12 gene − 11634 11747 114 Locate
clpP gene − 11906 13846 1941 Locate
psbB gene + 14299 15825 1527 Locate
psbT gene + 16003 16110 108 Locate
psbN gene − 16178 16309 132 Locate
psbH gene + 16397 16627 231 Locate
petB gene + 16748 18086 1339 Locate
petD gene + 18280 19517 1238 Locate
rpoA gene − 19694 20713 1020 Locate
rps11 gene − 20789 21205 417 Locate
rpl36 gene − 21307 21420 114 Locate
infA gene − 21530 21763 234 Locate
rps8 gene − 21888 22292 405 Locate
rpl14 gene − 22465 22833 369 Locate
rpl16 gene − 22960 24227 1268 Locate
rps3 gene − 24377 25021 645 Locate
rpl22 gene − 25006 25467 462 Locate
rps19 gene − 25527 25805 279 Locate
rpl2 gene − 25859 27352 1494 Locate
rpl23 gene − 27371 27652 282 Locate
trnI-CAU gene − 27818 27891 74 Locate
ycf2 gene + 28071 33419 5349 Locate
ycf15 gene + 33519 33767 249 Locate
trnL-CAA gene − 34030 34110 81 Locate
ndhB gene − 34660 36871 2212 Locate
rps7 gene − 37135 37602 468 Locate
rps12 gene − 37656 38449 794 Locate
trnV-GAC gene + 40066 40137 72 Locate
rrn16 gene + 40368 41854 1487 Locate
trnI-GAU gene + 42153 43174 1022 Locate
trnA-UGC gene + 43239 44118 880 Locate
rrn23 gene + 44289 47098 2810 Locate
rrn4.5 gene + 47197 47299 103 Locate
rrn5 gene + 47560 47680 121 Locate
trnR-ACG gene + 47925 47998 74 Locate
trnN-GUU gene − 48567 48639 73 Locate
ndhF gene − 50001 52217 2217 Locate
rpl32 gene + 52710 52886 177 Locate
trnL-UAG gene + 53325 53404 80 Locate
ccsA gene + 53488 54459 972 Locate
ndhD gene − 55619 55987 369 Locate
psaC gene − 56307 56552 246 Locate
ndhE gene − 56803 57108 306 Locate
ndhG gene − 57279 57809 531 Locate
ndhI gene − 58146 58652 507 Locate
ndhA gene − 58733 60906 2174 Locate
ndhH gene − 60908 62089 1182 Locate
rps15 gene − 62186 62458 273 Locate
ycf1 gene − 62849 68059 5211 Locate
trnN-GUU gene + 68401 68473 73 Locate
trnR-ACG gene − 69042 69115 74 Locate
rrn5 gene − 69360 69480 121 Locate
rrn4.5 gene − 69741 69843 103 Locate
rrn23 gene − 69942 72751 2810 Locate
trnA-UGC gene − 72922 73801 880 Locate
trnI-GAU gene − 73866 74887 1022 Locate
rrn16 gene − 75186 76672 1487 Locate
trnV-GAC gene − 76903 76974 72 Locate
rps12 gene + 78591 79384 794 Locate
rps7 gene + 79438 79905 468 Locate
ndhB gene + 80169 82380 2212 Locate
trnL-CAA gene + 82930 83010 81 Locate
ycf15 gene − 83273 83521 249 Locate
ycf2 gene − 83621 88969 5349 Locate
trnI-CAU gene + 89149 89222 74 Locate
rpl23 gene + 89388 89669 282 Locate
rpl2 gene + 89688 91181 1494 Locate
rps19 gene + 91235 91513 279 Locate
rpl22 gene + 91573 92034 462 Locate
trnH-GUG gene − 92417 92491 75 Locate
psbA gene − 92894 93952 1059 Locate
trnK-UUU gene − 94253 96791 2539 Locate
matK gene − 94511 96205 1695 Locate
rps16 gene − 97684 98656 973 Locate
trnQ-UUG gene − 99480 99551 72 Locate
psbK gene + 99880 100080 201 Locate
psbI gene + 100468 100578 111 Locate
trnS-GCU gene − 100691 100778 88 Locate
trnR-UCU gene + 102439 102510 72 Locate
atpA gene − 102621 104144 1524 Locate
atpF gene − 104711 105521 811 Locate
atpH gene − 105876 106121 246 Locate
atpI gene − 107126 107869 744 Locate
rps2 gene − 108141 108800 660 Locate
rpoC2 gene − 109111 113229 4119 Locate
rpoC1 gene − 113397 116239 2843 Locate
rpoB gene − 119402 119479 78 Locate
trnC-GCA gene + 120670 120750 81 Locate
petN gene + 121386 121481 96 Locate
psbM gene − 122447 122551 105 Locate
trnD-GUC gene − 123072 123145 74 Locate
trnY-GUA gene − 123252 123335 84 Locate
trnE-UUC gene − 123395 123467 73 Locate
psbD gene + 125455 126516 1062 Locate
psbC gene + 126464 127885 1422 Locate
trnS-UGA gene − 128143 128234 92 Locate
psbZ gene + 128561 128749 189 Locate
trnG-UCC gene + 129020 129090 71 Locate
trnfM-CAU gene − 129270 129343 74 Locate
rps14 gene − 129488 129790 303 Locate
psaB gene − 129912 132116 2205 Locate
ycf3 gene − 135106 137058 1953 Locate
trnS-GGA gene + 137669 137755 87 Locate
rps4 gene − 138047 138646 600 Locate
trnT-UGU gene − 139013 139085 73 Locate
trnL-UAA gene + 139772 140345 574 Locate
trnF-GAA gene + 140656 140728 73 Locate
ndhJ gene − 141396 141872 477 Locate
ndhK gene − 141978 142655 678 Locate
ndhC gene − 142709 143071 363 Locate
trnV-UAC gene − 143977 144635 659 Locate
trnM-CAU gene + 144817 144889 73 Locate
atpE gene − 145089 145490 402 Locate
atpB gene − 145487 146983 1497 Locate
rbcL gene + 147816 149279 1464 Locate
Status Available
Accession PV340612.1
Length 149,923 bp
GC content 38.1%
Annotated genes 131
Gene sequence records 8
Other 14 Photosystem I 4 Cytochrome 6 Photosystem Ii 15 Translation Rna 35 Ribosomal Protein 28 Rna Polymerase 4 Nad Dehydrogenase 12 Ribosomal Rna 8 Atp Synthase 6
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources